EMLSAT00000009018, EMLSAT00000009018-704865 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009018
Unique NameEMLSAT00000009018-704865
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s566supercontigLSalAtl2s566:176222..178061 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009018 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009018EMLSAG00000009018-691784Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040038EMLSAE00000040038-748966Lepeophtheirus salmonisexon
EMLSAE00000040039EMLSAE00000040039-748967Lepeophtheirus salmonisexon
EMLSAE00000040040EMLSAE00000040040-748968Lepeophtheirus salmonisexon
EMLSAE00000040041EMLSAE00000040041-748969Lepeophtheirus salmonisexon
EMLSAE00000040042EMLSAE00000040042-748970Lepeophtheirus salmonisexon
EMLSAE00000040043EMLSAE00000040043-748971Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773909auto773909Lepeophtheirus salmonispolypeptide
EMLSAP00000009018EMLSAP00000009018Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009018

>EMLSAP00000009018 ID=EMLSAP00000009018|Name=EMLSAP00000009018|organism=Lepeophtheirus salmonis|type=polypeptide|length=292bp
MIFCSIXXXXKTRRRDRESSQDGEQKLYLQEPLLERRVPEPDLIFVTDIP
KGLDFNEWLXSHXKYPISIDYFFKQLLSKAKRPIGFFEHINLIYGTISEF
CTHSSCPDMVGPGPRVYMWCDEKSKKSRLSAPQYIDYVFTFVQNTIGDES
IFPTKHGIDFPSGFENFIKKIQRLLFHVMAHIYYSHFKEIVLLRLHAHLN
SVFAHIIEFNIRFHTVEDKELEVLEDLIRALKIAAPPLKTSEAVDEENKE
NIESNSSTGQEQRSEDRMEEAENPEXATVEKSNMNETNSVVS
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mRNA from alignment at LSalAtl2s566:176222..178061+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009018-704865 ID=EMLSAT00000009018-704865|Name=EMLSAT00000009018|organism=Lepeophtheirus salmonis|type=mRNA|length=1840bp|location=Sequence derived from alignment at LSalAtl2s566:176222..178061+ (Lepeophtheirus salmonis)
ATGATATTTTGTTCCATTNNNNNNNNNNGAAAAACACGTCGACGGGATCG AGAATCATCTCAGGATGGAGAACAAAAGCTATATTTACAAGAACCTCTCT TGGAACGGCGAGTCCCTGAACCCGACCTCATTTTTGTTACAGATATCCCC AAGGGCTTGGACTTTAACGAATGGCTTMCTTCTCATAGMAAATACCCAAT ATCAATAGATTATTTTTTTAAACAACTCCTTTCTAAAGCTAAACGACGTG ATTTTGACGACTTTTTTGTCCACATAATCTCACTCTAATTATACAGTTGG ATTCGTCTATGTCTTTGTGTATAAAAACCTCCTTATCAAAATTTTATATA ATATTTAACTTCATAATAATAATAATGAAGGCAATGTTTTCCCTTTGTAA TTTCATATATTTTCCTATTATTTATCTAGCAATTGGTTTCTTTGAACACA TAAACCTCATCTATGGCACCATCTCCGAATTTTGTACACACTCCTCTTGT CCAGATATGGTTGGACCTGGACCAAGGTATACTATGGATTATGTTTTTCC GTACATTTCTTCTTAATTTCGGTTTTATATATCTCCCCCCTGTTAGAGTT TACATGTGGTGTGATGAAAAAAGTAAAAAGAGTCGTCTGTCAGCTCCTCA ATATATCGACTACGTATTTACATTTGTCCAAAATACCATAGGTGATGAGT CTATATTTCCAACCAAGCATGGTAAACTATCTCTACTTTGTTTTTAGCAT TTTATATTTTTCCTTTTTATAATTGTAGGTATAGACTTTCCTTCTGGCTT TGAGAATTTTATCAAGAAAATTCAACGTCTATTATTTCATGTCATGGCTC ATATATACTATTCACACTTTAAAGAGATCGTTCTTCTTCGTCTTCATGCT CATTTAAATTCGGTTTTTGCACACATAATTGAATTCAATATACGGTTTCA TACAGTTGAAGACAAGGAATTAGAGGTAATTTAACTCCCTTTGATCAGAC AAGTTGAAAAGATAATGATTTGGTATGTAATATATTTTTTAAATAAATTA ATTAACATTATTTAGGTTCTGGAAGATCTTATCCGGGCTCTAAAAATTGC TGCCCCTCCTTTGAAAACCTCAGAAGCAGTAGATGAGGAAAATAAGGAAA ACATTGAAAGCAATTCTTCTACGGGTCAGGAACAACGGAGTGAGGATCGA ATGGAAGAGGCTGAAAATCCTGAARCCGCCACTGTTGAAAAGTCAAACAT GAATGAAACCAACTCAGTAGTGTCTTAAGTTCAACTTTCCTCTTATCAAT GTTAATTTCTTGATTCAAGAAGAAATTCCCCATTTCCCCAAATTCATTCT CACACAACTGTTAATTCTATAAAACGCTACACAGTAAAGAAAAATACATA TATTATTATTAGAATTATTTGCACGAGTAGAAAGTTTAATGCCAAAAATA TTAAATCAATCAAAACGTTCACAACAAGTTCATCCCTCATGTACTTTTTT GTGAATCGTTCTATAAATATATTTATATATATTTCTAAAAATAAAAGCTT TAGTCAGAAATGTAGTATTAATTTAACAAAAACTTTTTTTAGTAAAAAAA AAAAGGACAACTTAAATAATGACTGCTTTTTACATTTATCAAATTTTGAA TAATTATGTTTATACCATTCAAAACGACTTCTTCCCCCCCCCTTAAAAAA ACTAAAAACGACTCAAGCAGCATGTATCATATTTTAGGTTATTTTTTTTA GTTTTCTTTAAGTGATTATTTTAACATAGAAATATATTTTTTTTTCTCCA GTGATCAGAAAAAATATTTTAGCATTTATGTGCACGCACT
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