EMLSAT00000009045, EMLSAT00000009045-704892 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009045
Unique NameEMLSAT00000009045-704892
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s566supercontigLSalAtl2s566:671554..672447 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009045 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009045EMLSAG00000009045-691811Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040165EMLSAE00000040165-749093Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779256auto779256Lepeophtheirus salmonispolypeptide
EMLSAP00000009045EMLSAP00000009045Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009045

>EMLSAP00000009045 ID=EMLSAP00000009045|Name=EMLSAP00000009045|organism=Lepeophtheirus salmonis|type=polypeptide|length=297bp
MNSKKLDLGFAESFFLSGTAAAVSKTSAAPIERVKLLLQNQNELLKQGKL
DSKFTSVKDCALRTLRNEGVLSFWRGNFASVLRYFPQQALNFSFKDQIRT
FMKISPKATYSEKFMKNIFSGGLAGSISLCFVQSIDYTRTRLATDRKGQF
NGIIDVYVKTLKSDGIVGLYRGFFVSCTCVFIYRGLYFGLYDSLKPILLD
ENHKMLVSFLLGWXVTITSGLIVYPIDTVKRRMMLTSGESVKYSSSLDCF
KHILRHEGLNAVYRGAGVNIIRGIAGAGVLSGFDQFKLIYTVWRLPQ
back to top

mRNA from alignment at LSalAtl2s566:671554..672447+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009045-704892 ID=EMLSAT00000009045-704892|Name=EMLSAT00000009045|organism=Lepeophtheirus salmonis|type=mRNA|length=894bp|location=Sequence derived from alignment at LSalAtl2s566:671554..672447+ (Lepeophtheirus salmonis)
ATGAATTCCAAAAAGTTGGATCTAGGGTTTGCTGAGAGTTTTTTTCTCTC
TGGCACGGCTGCAGCAGTCTCCAAAACATCTGCTGCTCCCATTGAAAGAG
TGAAACTCCTTCTTCAAAATCAGAATGAACTATTAAAGCAAGGAAAACTA
GACTCTAAATTCACGAGTGTTAAAGACTGTGCCCTAAGAACATTGAGGAA
TGAGGGGGTTCTTAGCTTTTGGAGAGGAAATTTCGCTTCTGTTCTTCGTT
ATTTTCCTCAACAAGCACTTAATTTTTCCTTCAAGGACCAAATCAGAACA
TTCATGAAAATAAGTCCCAAAGCTACATATTCTGAAAAGTTTATGAAAAA
CATATTTTCTGGAGGTCTTGCGGGTTCTATTTCCTTATGTTTTGTTCAAT
CCATTGACTACACTCGAACAAGACTGGCTACGGATCGTAAAGGACAATTC
AATGGGATCATTGATGTATATGTCAAAACTCTAAAGTCAGATGGGATTGT
AGGTCTTTACAGAGGGTTCTTTGTTAGCTGTACCTGCGTTTTTATTTATA
GAGGTCTTTACTTTGGTCTCTATGACTCGTTAAAGCCTATTTTATTAGAT
GAAAATCACAAAATGCTTGTTTCGTTTCTTCTTGGCTGGGSTGTTACCAT
AACGTCTGGCCTAATAGTATATCCCATCGACACTGTCAAAAGACGAATGA
TGCTTACTAGTGGGGAAAGCGTCAAATACAGTAGTAGTTTAGACTGTTTT
AAGCATATACTACGGCATGAAGGACTAAATGCAGTGTATCGGGGTGCTGG
AGTCAATATCATTCGGGGGATTGCTGGGGCTGGAGTGTTATCTGGATTTG
ATCAATTCAAGCTAATATACACGGTGTGGAGATTACCACAATAG
back to top
Add to Basket