EMLSAT00000009048, EMLSAT00000009048-704895 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009048
Unique NameEMLSAT00000009048-704895
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s566supercontigLSalAtl2s566:681309..682172 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009048 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009048EMLSAG00000009048-691814Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040182EMLSAE00000040182-749110Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779311auto779311Lepeophtheirus salmonispolypeptide
EMLSAP00000009048EMLSAP00000009048Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009048

>EMLSAP00000009048 ID=EMLSAP00000009048|Name=EMLSAP00000009048|organism=Lepeophtheirus salmonis|type=polypeptide|length=287bp
MAPPKDRLAAMKAQSYFPEEEDFSIPIDEESPAMRAFFGEIEETRGVIAN
IDRDIKVVRRCQESFINSPMVDEKHKIEMEDAMANIKKSANQVRTRLKKI
EQANQDLTDTDAESRIRKTQHMTLSRQFVEYMTEYNTLQNEYRDKSKGKI
QRQMELAGSNVTDDELENLLESGKGAQLVGHVVIEGDEEQLKQTINDLEN
RHEMFLNLEKSISELHDMFIDIAMLIENQGEMVNRIDTHVESAVEYTSRA
TNDTKKALEYQSKARRKKIMMLLCIDHCRWPWRMVCC
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mRNA from alignment at LSalAtl2s566:681309..682172+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009048-704895 ID=EMLSAT00000009048-704895|Name=EMLSAT00000009048|organism=Lepeophtheirus salmonis|type=mRNA|length=864bp|location=Sequence derived from alignment at LSalAtl2s566:681309..682172+ (Lepeophtheirus salmonis)
ATGGCGCCCCCGAAAGATAGACTTGCGGCCATGAAGGCCCAGTCCTATTT
TCCAGAGGAAGAGGACTTCAGCATACCCATCGATGAGGAGAGCCCAGCAA
TGAGAGCCTTCTTCGGAGAAATAGAAGAGACCCGAGGGGTCATCGCGAAT
ATCGATCGGGACATCAAGGTCGTACGAAGGTGCCAGGAGTCTTTCATCAA
TTCCCCTATGGTGGATGAGAAACATAAAATAGAGATGGAGGATGCAATGG
CCAACATAAAGAAATCTGCGAATCAAGTGCGAACTCGTCTCAAGAAAATT
GAGCAAGCTAATCAAGATCTTACCGATACAGACGCAGAGTCCCGCATACG
TAAAACCCAGCATATGACTCTAAGTCGGCAGTTTGTTGAGTACATGACAG
AGTATAATACTCTTCAAAATGAATACCGGGATAAGTCAAAAGGAAAAATC
CAGAGACAAATGGAGCTTGCGGGCTCCAATGTGACGGATGATGAACTAGA
GAATCTGTTAGAGTCAGGAAAAGGTGCTCAGCTTGTGGGTCACGTTGTGA
TTGAGGGGGATGAGGAGCAGTTGAAGCAAACCATCAATGATTTGGAGAAC
AGACATGAAATGTTCCTCAATCTGGAAAAGTCCATCTCAGAGCTGCACGA
TATGTTTATAGACATTGCCATGTTGATTGAAAACCAAGGTGAAATGGTTA
ATCGAATAGATACTCATGTAGAATCTGCCGTAGAGTACACTTCCAGAGCC
ACCAATGACACTAAAAAGGCTCTCGAATATCAATCCAAGGCGAGAAGGAA
AAAAATCATGATGCTTCTCTGCATTGATCATTGCCGGTGGCCTTGGAGGA
TGGTTTGTTGCTAA
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