EMLSAT00000009057, EMLSAT00000009057-704904 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000009057
Unique Name	EMLSAT00000009057-704904
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s568	supercontig	LSalAtl2s568:151820..156584 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000009057 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000009057	EMLSAG00000009057-691823	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000040217	EMLSAE00000040217-749145	Lepeophtheirus salmonis	exon
EMLSAE00000040218	EMLSAE00000040218-749146	Lepeophtheirus salmonis	exon
EMLSAE00000040219	EMLSAE00000040219-749147	Lepeophtheirus salmonis	exon
EMLSAE00000040220	EMLSAE00000040220-749148	Lepeophtheirus salmonis	exon
EMLSAE00000040221	EMLSAE00000040221-749149	Lepeophtheirus salmonis	exon
EMLSAE00000040222	EMLSAE00000040222-749150	Lepeophtheirus salmonis	exon
EMLSAE00000040223	EMLSAE00000040223-749151	Lepeophtheirus salmonis	exon
EMLSAE00000040224	EMLSAE00000040224-749152	Lepeophtheirus salmonis	exon
EMLSAE00000040225	EMLSAE00000040225-749153	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto773365	auto773365	Lepeophtheirus salmonis	polypeptide
EMLSAP00000009057	EMLSAP00000009057	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s568:151820..156584-

protein sequence of EMLSAP00000009057

>EMLSAP00000009057 ID=EMLSAP00000009057|Name=EMLSAP00000009057|organism=Lepeophtheirus salmonis|type=polypeptide|length=331bp
MIYVVVDDIIPEAQTCGNGKVASWGSILGFILMMSLDVGLSMMNSQVMWI
LVYCVTFHAIFVQATIPTKQILDKESAKWQEILLNSQTNGDIIKDPLMER
MIVQIMNGTVIPKIRKKIPPYNAADPLWLXPVEXXVKKKRLKAKVEVCDL
YIHNLKNIQLLHVDVRRSTHLDFYAFHVILHVPITWISGFYKLVNVKVLS
FIPTKGQGDFNVDIKHINFALIYTFSKKDNSSSVEIDKFEIGINWHKLAX
XFXNLAGGTMTDWILNQFGIGNLIIDAQKNMIIDELEGIFRALYNCILTH
SGRGIEPCMDKFWISQGWELPFVIPECIRDA

mRNA from alignment at LSalAtl2s568:151820..156584-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000009057-704904 ID=EMLSAT00000009057-704904|Name=EMLSAT00000009057|organism=Lepeophtheirus salmonis|type=mRNA|length=4765bp|location=Sequence derived from alignment at LSalAtl2s568:151820..156584- (Lepeophtheirus salmonis)
ATGTTTATTGGCTATTCTCCGATTACCCAATCCTTTTTTGGAACTCTCTT
CACTTGGGGTCTCACAACTGCTGGCGCTGCGTTAGCCTTTTTCGTAAAGG
GTCATCAGGTATGATGATCCTCATAAATCACAATTAAGTACTGTAGTAAC
ACTCAACACTCATAAATCCTTTCCTTCCTTTCAGCGGATTTATTTGGACG
CGAGTCTAGGATTCGCTGGAGGTGTAATGATAGCCGCATCATATTGGTCT
CTATTAGAGCCTGCCATTGAAATGACTAAACTTTCTGGACATACTGGAGC
ATGGAGTTTGATTCCCGTTGTACTAGGATTCTCTTTTGGAGCACTATTTG
TATATGTGGCTGATGTTTTGGTAACTAAGCTACAAGCAAACTCTACTGTT
GATTTAATAGGTCGTTTATTCAAAATAGTTCATCATATTTCAATTTAAAA
TTCATAAATAATCCAATGATAATATGGATATCTAATTTCATTCTTTCTAA
ATCTAAAAGGTATCCCTGTTATTAATTATTTTTGAATTAATCTCTTAGAT
ATTATCACGATATGCTATTGATTTATTGATCAACATGTCATAATTGAAAA
GATTTCATTGATTTTTTTTTCTAACTTTTGTTAATTTCCGTTAATTTTAT
TACCTCAGTTGGCGACTCACATCAAAGAAAATCTTCATTAAAAGAAGTAT
CTTGTCCAAATATTTTATATAGTCGTGAAAATAAACTGAAATATCCTTCT
CAAGAAACTTATGCAGGTAGGTTTATTGTCGAGTCTAGTAATCAATGTGC
AACATGATATTGTTATTTCCAAAAATTCTTATTTTTTTGGGCAGTATTTA
TAGACTCTTCATTATTTCACTTTATTCTTGTTGTATCAAAGCATTCTATT
GAAAAATATAGAAACTTAAAGACTGGAACTCAGATTTATACTATTATTTA
TAGGATCTTTCACTGATCAAGACGTCCGTAACCGACGAAAAGAAAAATAT
TCCGATGGAGAAAATAACTTTAATGTGTCATCACTTTCTAAGAAAGAGTC
TTATGATCGTTGGAAGCGAATTTTGTTGCTTATTATCGCAATTACTGTAC
ACAATATACCAGAAGGACTAGCTGTGGGTGTAGCTTTCGGAGCCGTTGGA
AAGAGCCCATCTGCTACTTTTGAAAAAGCCAGAAACTTAGCGATTGGCAT
TGGAATTCAGAACCTTCCTGAAGGTTTAGCTGTGAGTTTACCATTGAAAA
TGGCTGGCTATTCCGCAAAAATGAGTATTTGGTAAGGGAACTTATCCTGT
GATTTGGATGATCTATGATTTTACCTTAGGTATGGTCAGTTAAGTGGGCT
TGTAGAACTCATAGCTGGAATACTTGGAGCTCTTTTGGTAGGATGGATTA
TTCCCATTTTACCATATGCCCTAGCATTTGCAGCYGGAGCCATGATTTAT
GTTGTTGTTGACGATATTATCCCTGAAGCTCAAACTTGGTAAATGAATTT
TATTTATAGGTAAATTTGATGAGTCTTAACATTTATCTTTTTTTCTAGTG
GAAACGGAAAAGTGGCGTCTTGGGGATCAATTTTGGGATTTATTCTTATG
ATGTCTTTGGATGTTGGCCTGTCGTAATAATAATAATAATAATTAAATTA
AGTAATTTTTGAGTTGAGCTCAAATCAGCATTGCCATTTTGTTAGTNATT
GTGATATTCATAAAATATTTTTTAAATTTATAATTGTATTTAAATATGGC
ATTCTGTAGATTCTGCTTATATGAACCAAATTATAAAGTTTAATTAATAT
GATAAATAACCGTTTCAAAAATGGTTTTATATTTTTATTAGTCCTCTTAA
TGTAACATTAGTAACGATTTCTAATTGACCCAATTAAGTGGAATCTACTT
ACCTATACGTGCCTCTTGAGAATATAAACATTACTGTTGAACTCATAAGT
TATATTCATATCATAATACATATTATGTGTGCATTTAGTTCTGTGAATTG
TTTTAATAATTTAAGTAATGTTGTCTCTGTAATTGCGACAATCAATTTGA
TATAGTAATTGAAAAAGGCGAAAATAATATAATTATCATAAGAAGCTTTT
TGTATTTATTTAATTATGTATAATAAATTATTGGATGAAGTTAATTCTAT
ATTTAACATATGAGACTATTAATTTCTCTTTTTATATTTTTCCGTATTTC
TCCAACTATTACCTCTTCTTGTGACTTGAGGATATATACTCCTATACCAT
TCACCACGTTATTTGCAAATGCCCCCAAATTTTGAAATCTAAAGTCAACG
TCATCATAATTCAGAGGCATTTGTATTCTTGTAATTACAACATTGCCATT
AAATAACTCATCACACGATACGAAGGAGTAAGTGTCTGGTAGTAATAAAT
CCATTTTTATTCTGAAAGATAGAGTAGCATTCACTATATTAATATTGAAT
GGCTGGGKTCCATTAGAATCTAGTTCCCACCACCCAACAGATCCTTTAAG
AGAGKAGGTTCCATTCAGTATAAGAACAGATGGGAATTCAAACGTAACAG
CTAAATCAAGATCCGTCAAATTCTCATTTCTTGTCACAGAAATGTCTCTG
ATACGAATGGTGGATAGTCCATAAGCTTTAATTGCAGACATTTGAATTTT
AGCTTGGTACCCAGCTCCTGATGTTGTTAAATCAATCGGCTCTGGTAACT
TTGAGTCAACATCTAAAGGATCTATCTTTACACCATAAAGTCCTCCCTCA
TTATTTAAAGCCGTTTGATAATCTATCCAGATTTGCTCAATAAGTTTCTC
AAAAATTGTGTCATGAAGTCGTATTTCATCTGGTTCTTTTGAAGTTGTTC
TATTGTCGCATTTAACATCAGGATCCTCTAATTCCCAGGGAGCTAAATCA
TCACAAGGAGGAAGACCAGGATCGCTTAATCCCTCGTCGTTATCCTCGAA
AAAATCGTCATCGAAAAAGTTTCCATCATTTGAGTCAAAGTCTGAATCAA
AATTATCAATACTATTCTCAAATGATGAAAAATCATCCTCAGATCTCTTA
TGTTTCAGTCCATAAGAATTTACATTACTCAAAGATGTAAAAATTATGGA
TATCACTAATATATATTTCATGGTCCTACAATTTCCTTGTGATTTGTACT
ACTCAGACTACACAGATTTTTAAAAGTAATGACTCTATTTAAAATGAAAT
AAAATAAAAAGTCCGGTTTTTTATAGTTCACACAAATATGATGGGGAAAT
TTCCCCCTACACCAAATTGTGCGTCTTTTAAAAAAAGTTTTATAAAAACA
TTTATTACGTGTTTGAAACATTCTGTATTTCATTAAAAAAAATGTTTATA
CAGGAATAATCATCGTAAATCATTCTAATTAATTATTAAATATGTTTATA
TAGTTATTGGAAGAATCATACTTTTGAATCTGTATAAAATAATGAATCCA
CTTGTTCGACTCAAATATGTTCTTAATAAATGATAAAATCCAGCATAAAA
TAAAGAGCTTTAAAACCCGTTTCTTATTATTTCTTTCACTCATAAACTAT
AAATATATATATTATATATAATCCTCATTTTGATTTAATGTAACACATTA
TCTTACTTTTCTTTGAGTCGCTGGGAATTTTTCTCATAATTTAATGTTAG
AATGATGAACTCTCAAGTAATGTGGATATTGGTATACTGTGTTACTTTTC
ATGCTATATTCGTTCAAGCAACAATCCCAACAAAACAAATATTGGATAAA
GAATCTGCAAAATGGCAAGAGATTTTATTGAATAGTCAAACTAATGGAGA
TATTATCAAGGATCCTCTTATGGAGAGAATGATTGTTCAAGTAACTATAA
TAATTTAACAAGTCAACCATGTATGATGTTCCTTAACATGAGAAACTAAC
CTATACAACATTTAATATTATAATAATAGATAATGAATGGTACTGTAATC
CCCAAAATACGTAAAAAAATTCCACCTTATAACGCTGCAGACCCTTTATG
GCTTYTTCCTGTGGAGGKGGRAGTAAAGAAGAAGCGTCTAAAGGCTAAAG
TTGAAGTCTGTGATCTCTATATTCATAATTTAAAGAATATCCAATTACTC
CATGTAGATGTAAGACGAAGTACACACTTAGACTTTTATGCCTTTCATGT
CATACTTCATGTTCCTATAACGTGGATATCTGGATTCTATAAATTGGTCA
ATGTAAAAGTTTTGAGCTTTATACCAACAAGTAATGATACTGTATAAATC
ATAATCATACATATATATTCATATTTATATGCCATCAAATATTTATTTTT
ATGAAAATATTTAACAATGAATAGAGGGCCAAGGCGACTTTAACGTCGAT
ATAAAACACATAAATTTTGCTTTGATCTATACTTTCTCAAAAAAAGACAA
TTCTTCGTCGGTGGAGATAGACAAATTTGAAATTGGAATCAACTGGCACA
AATTAGCATTWWAATTYSATAATCTTGCAGGAGGTACCATGACAGATTGG
ATTTTGAATCAGGTTTGTTTCCCATTAATGTTCATTATTTTTCTTCATTT
ATCAATGTGTTATTTTATAGTTTGGAATCGGAAATTTGATAATTGATGCT
CAAAAGAATATGATCATTGACGAATTAGAAGGTATTTTTAGAGCTCTATA
TAACTGTATATTGACACATTCTGGAAGAGGAATTGAGCCTTGTATGGATA
AATTCTGGATTTCTCAAGGATGGGAACTTCCATTTGTTATTCCAGAATGT
ATTCGAGATGCTTAA

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