EMLSAT00000009060, EMLSAT00000009060-704907 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009060
Unique NameEMLSAT00000009060-704907
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s568supercontigLSalAtl2s568:161159..162577 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009060 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009060EMLSAG00000009060-691826Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040233EMLSAE00000040233-749161Lepeophtheirus salmonisexon
EMLSAE00000040234EMLSAE00000040234-749162Lepeophtheirus salmonisexon
EMLSAE00000040235EMLSAE00000040235-749163Lepeophtheirus salmonisexon
EMLSAE00000040236EMLSAE00000040236-749164Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773578auto773578Lepeophtheirus salmonispolypeptide
EMLSAP00000009060EMLSAP00000009060Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009060

>EMLSAP00000009060 ID=EMLSAP00000009060|Name=EMLSAP00000009060|organism=Lepeophtheirus salmonis|type=polypeptide|length=412bp
MMSFLDSNYYPSPFKSKIIRLSTSDDAHYELYSDETHVDSYPRKSAVGRS
QEAPKIFLDTLNNEDDDVFFQASSSIQDKENLVPSSNQSSFSSYLSPIQY
KKTPRSHQRILSSFESSPKNLPSVNSPGRAHLHSFGLDVLKNNPKIFLGK
GSFGTVVLGRLNGKRVAVKVVPRVDSTRLNRTDGEVNAKLLTHDNIVHLF
GVFYDAVDCNNNIVIVMEYVGKTNLQQLINENKQILNESFIHRCLKDLSD
ALSHCHYKGMWHLDVKPSNVFVTSRGVCKLGDFGCSRLAGXSQDADFLVG
TPGYQAPEMLQYQYASDKCDVYSFGVLCWQVIRKEIPYDGVHPHTIVYKV
VSENFRPPDSTSLPSYFKPYQQIYRKSWDQNPKRRPDMKDIFLEIQSITV
SRKISSSIKIRI
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mRNA from alignment at LSalAtl2s568:161159..162577-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009060-704907 ID=EMLSAT00000009060-704907|Name=EMLSAT00000009060|organism=Lepeophtheirus salmonis|type=mRNA|length=1419bp|location=Sequence derived from alignment at LSalAtl2s568:161159..162577- (Lepeophtheirus salmonis)
ATGATGTCCTTTCTGGATTCGAACTATTATCCCAGCCCATTCAAGTCGAA
AATTATTCGTCTTTCAACGAGTGATGACGCTCATTATGAATTGTACTCCG
ATGAGACACACGTTGATAGTTATCCGAGGAAATCTGCCGTGGGGAGGAGG
TAAATTACCAGAAATACATCCATAATTGATTGATAATTTTAAAGGTCCTC
ATCATTAGCCAAGAAGCACCCAAGATATTTTTAGATACATTAAATAATGA
AGATGATGATGTATTTTTCCAAGCTTCGTCTTCTATTCAAGATAAAGAGA
ATTTAGTTCCTTCTTCTAACCAATCCTCATTTTCTTCGTATTTATCTCCA
ATACAATATAAAAAAACTCCTCGATCTCACCAAAGGATTTTGTCAAGTTT
TGAGTCTTCTCCCAAAAATCTCCCTTCTGTTAATAGTCCTGGAAGAGCGC
ATCTCCATTCCTTCGGATTGGATGTCTTAAAAAATAATCCAAAGATTTTT
TTAGGAAAGGGAAGCTTTGGAACAGTAGTCCTCGGAAGACTAAATGGTAT
ATCCTAGAACTAATCCTTGAGCTTTATTCAAATTACTCTCACCTACTATA
TTATATTATCAAAAGGTAAACGTGTTGCCGTAAAGGTTGTACCCAGAGTT
GATTCTACTCGATTAAATCGAACAGATGGGGAAGTCAATGCTAAACTTTT
AACACACGATAATATTGTCCATCTATTTGGAGTATTTTATGACGCAGTGG
ATTGCAACAATAACATAGTTATAGTAATGGAATATGTAGGAAAAACCAAT
CTTCAACAATTAATTAATGAAAACAAACAAATTCTTAATGAATCTTTTAT
TCATAGGTAATGTTCCTTGTATTTATGTTACTATATATTTTATTTAATAC
TTACATAGATGTTTAAAAGACTTGTCAGATGCTTTAAGTCATTGCCATTA
CAAGGGAATGTGGCATTTAGATGTAAAACCAAGTAATGTATTTGTAACCT
CAAGAGGAGTTTGCAAGCTTGGAGATTTTGGTTGCTCAAGACTGGCCGGK
GKGTCCCAAGATGCAGACTTTTTAGTTGGAACACCAGGCTATCAAGCTCC
AGAAATGCTCCAATATCAATATGCAAGTGATAAATGTGATGTATATTCAT
TTGGTGTCTTATGCTGGCAAGTAATTAGGAAGGAAATCCCTTATGATGGT
GTTCATCCTCATACAATTGTATATAAAGTGGTGTCAGAAAATTTCAGACC
CCCTGACTCGACATCCCTTCCTTCTTACTTCAAACCCTATCAACAAATAT
ATCGTAAGTCATGGGACCAAAATCCAAAGAGAAGGCCAGACATGAAGGAT
ATTTTCTTAGAAATCCAATCTATCACTGTTTCACGAAAAATTTCTTCCAG
TATAAAAATTAGAATATAA
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