EMLSAT00000009102, EMLSAT00000009102-704949 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000009102
Unique Name	EMLSAT00000009102-704949
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s573	supercontig	LSalAtl2s573:238171..243653 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000009102 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000009102	EMLSAG00000009102-691868	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000040417	EMLSAE00000040417-749345	Lepeophtheirus salmonis	exon
EMLSAE00000040418	EMLSAE00000040418-749346	Lepeophtheirus salmonis	exon
EMLSAE00000040419	EMLSAE00000040419-749347	Lepeophtheirus salmonis	exon
EMLSAE00000040420	EMLSAE00000040420-749348	Lepeophtheirus salmonis	exon
EMLSAE00000040421	EMLSAE00000040421-749349	Lepeophtheirus salmonis	exon
EMLSAE00000040422	EMLSAE00000040422-749350	Lepeophtheirus salmonis	exon
EMLSAE00000040423	EMLSAE00000040423-749351	Lepeophtheirus salmonis	exon
EMLSAE00000040424	EMLSAE00000040424-749352	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto775067	auto775067	Lepeophtheirus salmonis	polypeptide
EMLSAP00000009102	EMLSAP00000009102	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s573:238171..243653-

protein sequence of EMLSAP00000009102

>EMLSAP00000009102 ID=EMLSAP00000009102|Name=EMLSAP00000009102|organism=Lepeophtheirus salmonis|type=polypeptide|length=479bp
MSYEEEIQETETNPLEADVIPPGDGFXSALYDYPQNSVIQPLLTDEFLDY
LKNLTPDSLTIYAIAEGSIVFPRIPLIVVEGPLILAQLLETIFLNLVNFA
SLITTNAARFRIAAGVKSIKLFEFGLRRAQGPDGGLTASKYSYIGGFDGT
SNVLAGKMFNIPVKGTHAHAFVTSFTEPEDLVYNRLAHKEDDTIVEEDFY
GRCVEWKGKMASYLNILNDEASVGELVAFTSYAIAFPDGFLALVDTYDVT
RSGLLNFCAVAMALHDLGYKPLGIRIDSGDLAYLSQVARKTFKTVSTHFE
VEWFSSLLIVVSNDINEETILSLNEQGHSIDCFGIGTHLVTCQRQPALGC
VYKLVDINGKPKIKLSQDVEKVTMPGRKNVYRLYSSDGHALIDLLLRPTE
EPPAVGSKVRCRHPFQESKRAWVTPSKVESLYSVWWRNGEIAKRVPTLNQ
VRETVQHSLKTLRQDHKRSLNPTPYKDQH

mRNA from alignment at LSalAtl2s573:238171..243653-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000009102-704949 ID=EMLSAT00000009102-704949|Name=EMLSAT00000009102|organism=Lepeophtheirus salmonis|type=mRNA|length=5483bp|location=Sequence derived from alignment at LSalAtl2s573:238171..243653- (Lepeophtheirus salmonis)
ATGTCATATGAGGAAGAGATCCAAGAGACGGAGACGAATCCTCTCGAGGC
CGATGTCATCCCTCCTGGGGATGGCTTCAMCTCTGCCCTCTATGAYTATC
CACAAAACTCTGTTATTCAACCACTTCTTACGGGTAAATTAGTATGAATA
ATCCTCTTAATTCTAAATTATATTCCACTTTGTTATTATTGAATTCAAAT
AATACTCTGATGACGTCATTAAAGTTAAGGAATTTATTTTTATTTATTTT
CATGCCATTTTGTTGTTGCGTAATTCTTCTGAGAGTAAATCATGATGACG
TACTGGTATTTTTTTTTAGAATTGCTACATTTTAAATTTCCCGCTGACGT
TGTTGGATCGGTCCTGGGACTGCATTCCTAATTAGGAATGTGGTCCTATG
CCCCCACTCCCTCTTTCTGTCTCTTTTTTATGGGTCTGATCTTTTTTACC
TTTCAGTGGTCCTAAGGACCTGTTAGTCATTCCTACGGTATGTTCTATCA
TTTTATTTTCTTAACTCCTAACTAGGATTGACGAATATAAGTCAAGAATA
ATTGATAGAATGTATGATACTGAAGTATTAAGCGCTYTAGCCACACACAT
CCTAATTTAAACTTCAGCTATCTTGTCTTGTCTCTTTAAATAAATCTTAT
GATAAAACTTAAATCGATTAAATGGCGTAGGTAAGAACTACCTCATTTGA
GCTGTTATAGTTACAATAAGACCGTTAAAGGCCGTTCCTAAGACTGACTA
AATTAATCAGGATCGGACTCATAGGAATGTAGCCTTTTTAATTTTTTATT
TATAGCGATCCAACACTACTTAGTAACCACTGCTAATTAATTAGAGAAGA
TTGTACATATTATATTTTGCCAKGAGGCATGAAKTAACCACTCTTGTTGT
CTATTCGTATTACTGGAATGAATTGGGATACCCAAGAATTTTAGCTATAT
TTAAAAAAACGTTTATTTAATCTAAGAGACTTATATTGGCCCGATATGAT
CTTTCAAATAAAATCCATCAATTTATCATTATTTTATTGTCAATTTTGGT
TATTTTATGTGCAATTTGCGATACCTCCAAAGGGTTAATCAGAATAATTT
GTTGGTAGAAATTGGCGATAATAATTCGCCGAAGAATACAAATATTATCC
CGACTCAATTTTGAGAATTTTTATTTAACTTAATTCTATGTGGTGTATCA
TCTCAAAAGTCTTTATAGATGATAAAGAGCGCGATGTTTATAAATTACAG
GTTATATTGTTTATGAGTCAAAACAAAAGCAATATTGAGCTAAAATCAAG
AAAATGAGAAATTACCAATAGTTAATTTTTTACTTCATAATTGTATGCGC
CCAATATTATTTGATTGACATATTCCGGTTAGTTATGAGTTTTATATGAA
GATATATTGAGACTCTGAGAATGTTACCTATAGTTTAGCGTCTTTATTTG
ATTTATGAATGTTTAATTATTTGGCTCTGAACCATACATTTTTTCTATAG
AATCCTTCATATTATTCGATTATGATCGATAATTTTTGCGATCTGTAAGC
AATTTTTGTTGTTTTTGTGGGATAGATTAGAATAATTCATTAGTAGAAGT
GGAGAATAATTAGTCGAATAGATCAAACGTAATCAATTAAATTACAGGTT
TATTTTTAAAAATGACTCAATCTATCTATAAAACATTTTTATTATGCATT
TTCAGACTTGTATCAGATAACAATGGCATATGCACATTGGAAAAACCAAA
GGACGGAAGAAATAGCAATATTCGATCTCTTTTTTCGGAAAAATCCTTTT
GGAGGAGAATTTACTATATTTTCAGGGTTGACGGATTGCTTAAAGTTTCT
CGAAAACTTTAAATTTTCCGAAAGTGGTAATTTTAATGAAAAAATTCCGC
ATTATTCAATGTACATATGATCTATGGCGCAATTTATTATTTAGATATCG
ACTACTTGAGAAATGTTCTTCCACCAACTGTTGAAGATGAGTTCTTAGAT
TATTTAAAGAACCTAACCCCTGATAGTTTGACAATTTACGCCATAGCAGA
GGGATCCATCGTTTTTCCAAGGTTATATTATAATTATTTAAAAAAACCGA
TCATACAAACTAAACTTATTTTTTCAATATATAAATAGAATTCCATTAAT
CGTAGTTGAGGGCCCTCTTATTCTCGCTCAACTCTTAGAAACCATATTTC
TTAATCTCGTCAACTTTGCCAGGTATGACTATTTTGTATATCCTATTGAT
ATAGAGACTTATTATTAATTTATTCATATTTTTCAACAGCCTAATTACAA
CAAATGCAGCTAGATTTCGAATTGCTGCTGGCGTCAAAAGTATTAAATTG
TTCGAATTTGGATTACGTCGAGCTCAAGGACCAGATGGAGGACTTACTGC
ATCCAAGTATTCATACATTGGTACTGTATAAATAATTTAGTTTTTTATCC
ATAATTCCTCCGAGTGGATTTTACCTCTAACGCAGAAATCAATCATTGTA
ATATGATTATTGATTTGTTATTGTAAACTTATTTTGATTGATATATAAAT
ATTAAAACGCAGAATTGGGAAAATATTTGCAGAGAAAATTTTATGTATGG
GTTTACTTTTAATGACTTAGTTTTGAAATGCGTCATAACTAAGTGGCAAC
ACGTTATTCATCTACGACGGGGTTTTCAGTCATATATGACCCTTGATGAA
CACATAATGTTGAAGGGAAGACACACTTGGACTATTTGACACACATACAT
AATTTATATGATATTTTTATAAATAAATTCACTTATTGGGTCATGGCTAT
AAAATAAAGATATTCGACATACTTAATATCAAGTTATTCCAATTTTTTAA
TGTATATTTTTTTTGAAAGGTGGATTTGATGGAACGAGTAATGTTCTTGC
TGGAAAGATGTTCAATATCCCGGTTAAAGGAACACACGCACATGCATTTG
TTACATCATTTACGGAACCAGAGGATCTCGTCTATAATCGTCTAGCTCAC
AAGGAGGATGATACTATTGTTGAGGAAGATTTTTATGGAAGATGTGTGGA
ATGGAAGGGKAAAATGGCGTCTTATTTGAATATATTGAATGATGAGGCAT
CTGTTGGAGAATTGGTTGCGTTTACGTCATATGCAATTGCATTTCCCGAC
GGATTTCTAGCTTTAGTTGACACGTACGACGTTACGAGGTAGTCATTTGT
TTGCACTTAAAAAATTAAGGAGTTGTAAATAGTATTTATAAAACAATTTG
TTTTCATTAGCATCATTAATGATTTTGAGAATGATTTTAGGTAAAATTGG
GTTTCAGTTTTTGAAGCTCTTACGTTAAATAATTAACAACTATATGCTTT
TATAGATGATTAAAGTATTGAATGATTGGACCTCAAATATTCATGAATAT
ATACTGATTTATGTGACTTATTTTAAACAACAGCAATTTCAAAAGAACAT
GAAAGTTTCTGTCAAGGCCATATTATAGTAATAGACAATAGTATTATATA
CGTAYTATCCATAAATTAATTAATTATTCCTTATTTTTTTAATATATTGC
TCTGCACGAATCATATTTATGTTAATGAAATCATTGTTTTATTTCAAGAG
GCAAGCTGGCTGGCTTGCTCTCATTCCATATTTTATTTACTCGATCATCA
TAGCTGTATCGGCATAGATTTTTACAGCTTCTTCATAGTAAATACTATAA
AAATGTGTGAAGTTAATATATATAATATATATGAACTTTGCTCAACAATT
TCTTTGAATTATTTCCCTTTTTAAATACATTAGCATGATGACTAAGGATA
TTGTATATATTATTTGAATGCTCAGTTTGCACTTGCTTCAATACAATTTA
TTTTATTTTAATTTGACGATTTTAAATGAACGATTCACTTTTATAGGAGT
GGTTTGTTGAACTTTTGTGCTGTTGCAATGGCTCTTCATGATTTAGGTTA
CAAACCTCTGGGTATACGAATTGATTCAGGAGATCTTGCTTATCTTAGTC
AAGTTGCTCGTAAAACATTCAAAACTGTATCTACACATTTCGAAGTAGAG
TGGTTTTCGTCCCTTCTTATTGTTGTGTCCAATGACATAAATGAAGAGAC
CATCCTTAGTCTTAACGAACAGGGGCACTCCATTGACTGCTTTGGAATAG
GGACACATCTAGGTGAGGTTTGATAATCCAGTAAGAATTTAGTGGAATTG
ATTTGCATATCTGTGTTGTTATCTATAATTCAAGTAACTTGCCAGCGACA
GCCTGCATTGGGATGTGTTTATAAACTTGTAGATATTAACGGCAAACCCA
AGATCAAACTCTCTCAAGACGTTGAAAAAGTGACGATGCCAGGACGTAAA
AATGTATATCGTCTATATAGTAGTGACGGACATGCACTCATTGATCTGCT
TTTGAGACCCACTGAAGAACCTCCAGCTGTTGGAAGTAAAGTCCGATGTC
GACACCCTTTCCAAGAATCTAAACGAGCTTGGGTAACGCCTTCAAAAGTT
GAGTCTTTATATAGCGTATGGTGGAGAAACGGAGAAATTGCTAAACGAGT
ACCTACACTCAATCAAGTACGAGAAACAGTACAACATTCTCTCAAGACTT
TAAGACAGGACCACAAGAGGTCACTGAATCCAACGCCTTATAAGGTATTT
GTTCAAATGTCCCTGGTTATCTTTGTGTTGAGGGATTTTTCCTTATTTTG
TAGGTTGGCGTTTCGGATGAGCTATATAACTTTTTACACAAATTGTGGTT
GGACAACCAACCCATTGGGGAGCTTTCCTGACAAACATATGCCCTGGATT
TCGGGGCTTCAGGTAAAATAAAATTATTATTATTATTATATTTTTCCTCC
CTTATTGGTCAGAGGGAGTTGCACCGATTAACCATTGAATTACAAGTAAT
CCCTAAGACTTTGCAGATATCTTGAAGTCAATTTACAAATCATATGTAAA
TTGTCTTCTCTAGGATGCACTGGGATTCGAACTGGAGCATAGTGGACATT
TTGCACCAGAAAAGTTATTCTCCTGAAATTCGTGAGTTAGAATCCCGGCT
CCTAGTGAAGGAAATTTGCATTCAATATGAAAATTGACCAGAAGATATCA
GATGTATTAATTGTAGTGCTAAAATTACTGTTGTGTCAGTCCTTTTTTAT
TTACTCCATGTCTTAGGACCGGTCCCATCAGTCCAAGGGACAGGTCCTTC
GCACTGTCAGTACTAAAATTTATTTAAAAAAAAGAAGAAATATAGTACAA
TGACATCATCAAGGAGCGATATGCAGGAATGAACTGGACGGGACTGCAAT
CTTCAGTCCTAAAGAAGGAACGACACAACACTAGTTATAATGTCTACCAA
TAGGTATCTAATCGGTGCCGCTCCATCTAACCAATTAAGTTTCTACCTTT
AGAAACATTTGGGTGGAAGAAATGAAGCATTATATTAAATAGAGCCTTTT
TCTTTTCTTTTTTACTTATAGGATCAGCATTAG

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