EMLSAT00000009122, EMLSAT00000009122-704969 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009122
Unique NameEMLSAT00000009122-704969
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s574supercontigLSalAtl2s574:587075..588257 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009122 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009122EMLSAG00000009122-691888Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040507EMLSAE00000040507-749435Lepeophtheirus salmonisexon
EMLSAE00000040508EMLSAE00000040508-749436Lepeophtheirus salmonisexon
EMLSAE00000040509EMLSAE00000040509-749437Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778757auto778757Lepeophtheirus salmonispolypeptide
EMLSAP00000009122EMLSAP00000009122Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009122

>EMLSAP00000009122 ID=EMLSAP00000009122|Name=EMLSAP00000009122|organism=Lepeophtheirus salmonis|type=polypeptide|length=346bp
MESVIKEEFRKNSTRLLSEIQNRYILHWNYRSYEKIPMELLDYGGHIEEL
YLKENGLKDIPEELPLRCPNLTNLYLYSNELTQIHPSIGNMKSLTTLDLS
RNKLLELPPEIGYLSSLKNLDLSSNKLKSIPTTIGSLEKLEYFYIVGNHI
KEIPKTIKNCQNLVALYGGLNEITKIPIELAECHELRDLYFNDNKLTRIP
EILTIKLQKLETLNLNNNNLEYLPSRIFHSIAPKVSFHENPRLHHLSFIL
ACQINMAYPISKMNPICNGTFRFANRGCFLPLHEGDILKSSDMSNSMMIS
RSGQTHIFKFPAEIHILEKENSIPTLLELSLRISYVITHPHEKRFI
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mRNA from alignment at LSalAtl2s574:587075..588257-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009122-704969 ID=EMLSAT00000009122-704969|Name=EMLSAT00000009122|organism=Lepeophtheirus salmonis|type=mRNA|length=1183bp|location=Sequence derived from alignment at LSalAtl2s574:587075..588257- (Lepeophtheirus salmonis)
CAACAGGATAATGGAATCAGTAATCAAAGAGGAGTTCAGGAAGAACTCGA
CTCGTTTGCTATCAGAAATACAAAATAGATATATTCTTCATTGGAACTAT
AGATCCTACGAAAAAATTCCAATGGAGCTACTAGACTATGGAGGCCATAT
AGAAGAGCTATATCTCAAGGAAAATGGATTAAAAGATATTCCCGAGGAAC
TTCCTTTGAGATGCCCAAATCTAACAAATTTGTATTTATATTCAAATGAG
TTGACTCAAATTCATCCTTCCATCGGTATTATCTAATATTAATCTTAATT
TTACTTATTTAAAACTATAGAAATGATAATGTGTTATAGGGAATATGAAA
AGCTTGACAACTCTTGATCTCAGTCGCAACAAACTCCTGGAACTACCTCC
TGAAATAGGCTATCTTTCATCCCTTAAAAACTTAGACTTAAGCTCTAATA
AATTAAAATCAATTCCAACAACAATAGGATCTTTGGAAAAATTAGAATAT
TTTTACATTGTGGGAAATCACATCAAAGAGATCCCCAAAACTATAAAAAA
TTGTCAAAATCTTGTAGCTCTCTATGGTGGATTAAATGAAATAACCAAAA
TACCAATAGAATTAGCGGAGTGCCATGAATTGAGGGATCTCTATTTCAAT
GACAACAAGCTGACAAGGATACCTGAAATCCTTACTATAAAATTACAGAA
ATTAGAAACATTAAACTTAAATAATAATAATTTGGAGTATTTACCAAGTA
GAATTTTTCATTCTATAGCACCAAAAGTATCTTTCCACGAGAATCCGAGA
CTTCATCATTTAAGCTTTATTTTAGGTGATTAAAAATATTAATTTGATAT
TATGGTCTCAACAATGATTAAATCATGATTTTTTTAACCATTGTAGCTTG
TCAAATCAACATGGCGTATCCTATTTCAAAAATGAATCCAATCTGCAATG
GAACATTTCGATTTGCGAACAGAGGTTGCTTCTTACCATTACACGAAGGT
GACATTTTAAAATCATCAGATATGAGCAATAGCATGATGATTTCAAGAAG
TGGCCAAACACATATTTTTAAATTCCCTGCAGAAATTCATATTTTAGAAA
AAGAAAATTCAATTCCAACTCTCTTAGAACTAAGCCTACGTATTTCATAT
GTAATCACTCATCCTCACGAAAAAAGATTTATT
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