EMLSAT00000009128, EMLSAT00000009128-704975 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009128
Unique NameEMLSAT00000009128-704975
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
RNAi_AH 9128 female
  1. PreAdult2
 -Missing-
-Missing- 		08.11.2018 - 09:33
13.12.2016 - 09:33
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s574supercontigLSalAtl2s574:644895..646059 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009128 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009128EMLSAG00000009128-691894Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040532EMLSAE00000040532-749460Lepeophtheirus salmonisexon
EMLSAE00000040533EMLSAE00000040533-749461Lepeophtheirus salmonisexon
EMLSAE00000040534EMLSAE00000040534-749462Lepeophtheirus salmonisexon
EMLSAE00000040535EMLSAE00000040535-749463Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779092auto779092Lepeophtheirus salmonispolypeptide
EMLSAP00000009128EMLSAP00000009128Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009128

>EMLSAP00000009128 ID=EMLSAP00000009128|Name=EMLSAP00000009128|organism=Lepeophtheirus salmonis|type=polypeptide|length=130bp
MVAMAGTYNFVSQDNFDKYLSASGVGTIHRMAITKSKPDIVVECSGDNYT
FTTKTALKDIKISFTLGQEYECDPGTGRVAKYVTTKDGDTLITKEVSDPD
SVATRKFTDDELIMTMTAKGVTGTRTFKRA
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mRNA from alignment at LSalAtl2s574:644895..646059+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009128-704975 ID=EMLSAT00000009128-704975|Name=EMLSAT00000009128|organism=Lepeophtheirus salmonis|type=mRNA|length=1165bp|location=Sequence derived from alignment at LSalAtl2s574:644895..646059+ (Lepeophtheirus salmonis)
TGTTATACAAAAAATAAGAGGTGATAATATATGTTACACTTCTTATCTCA
TGATAGAGAAGAGGACACAAAAAGTATAGTTTGTGTATATATACTCTCAG
CTATGCTTTTTGAACTTCATTCTTGTATCAAGAGACTCAGAACATATATA
CATCAGTATATTTGCAATCCTTACACGTGAAACAAATAATCACTTACTAC
ATTCAATATGGTCGCCATGGCTGGRACTTATAACTTTGTCTCTCAAGACA
ACTTTGACAAATATCTTTCAGCTTCAGGTAGAGCAATCTGACTCTTTTAA
TATTAGTCTAAAGATATATCAACATCCTTTTTTTTTCTTCTTCTTCTTCT
AGGAGTTGGAACCATTCATCGTATGGCCATTACCAAAAGCAAACCAGATA
TTGTTGTAGAATGCTCTGGAGATAACTACACCTTCACAACGAAAACAGCA
TTGAAAGACATTAAGATTTCCTTTACTTTGGGCCAAGAATATGAATGTGA
TCCTGGAACTGGGCGTGTTGCAAAGGTAGATAAGATATATAACTATACAA
ATATCCAGATAATTTGACTTTTTTTTTTCTCCGGTAGTACGTCACTACCA
AGGATGGAGATACATTGATTACAAAGGAAGTTTCCGATCCTGATAGTGTT
GCCACAAGGAAGTTCACAGACGATGAACTTATCATGGTAAATATATTATA
TCCTTGATACCTATATGGGCATTCAATTACTCTTGCTTATATGTATATTT
TTATTACAGACCATGACAGCTAAGGGAGTCACTGGTACCCGGACATTTAA
GAGAGCTTAAGTTTCAACATTATGTCAACTTAATTTTGTCAAACATTTCG
CAGTCAATATAATAAAATATTATAAAAGAATCACTCTTATTTTGATCCTA
TTTTGACTCTCATTTCAATGACATAATTATTTTCTCACCTTTTAGCGTCC
AAGGAGCCTTCCAATTAAATACCTTTAATAAATCTAATTATAAAAATCAT
TTAAACAGCATATTTCTATAAAATAATATAGGATTTAAGGAATTTTTTCT
AAGAAAAGAATGCTGTTTTTCTTTTACAAAAGTGAGAAGACAGAAAAAAT
ATTACTCAGACATAAATACCATTATATGAAGTGTGTATATAAAAATGCAT
TGGGATGTTTGTGTA
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