EMLSAT00000009131, EMLSAT00000009131-704978 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009131
Unique NameEMLSAT00000009131-704978
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s574supercontigLSalAtl2s574:694371..695847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009131 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009131EMLSAG00000009131-691897Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040541EMLSAE00000040541-749469Lepeophtheirus salmonisexon
EMLSAE00000040542EMLSAE00000040542-749470Lepeophtheirus salmonisexon
EMLSAE00000040543EMLSAE00000040543-749471Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779374auto779374Lepeophtheirus salmonispolypeptide
EMLSAP00000009131EMLSAP00000009131Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009131

>EMLSAP00000009131 ID=EMLSAP00000009131|Name=EMLSAP00000009131|organism=Lepeophtheirus salmonis|type=polypeptide|length=390bp
MSKNCLSIFKSSIPNRKFGFRSLSTNQVIEREAKYGAHNYSPIPIAIAKG
KGIYVWDVEGKKYFDFLSAYSAVNQGHCHPKIIKALHDQADILTLTSRAF
YNNVLGEYEEKACKLFGFDKLLPINTGVEAGETGIKLARKWGYLVKGIPT
NQAKIVFCTNNFWGRTIGAISSXPTVCSFMVEPIQGEAGVVVPDDGYLRE
XRRLCTENKVLWIADEVQTGLGRTGKLLACDHENVKPDILLLGKALSGGV
LPASAALANDEVMTTLKPGQHGSTYGGNPLACKVAMAALDVLIEEKLSEN
ATNMGEILRGELSKLPSEIIKTVRGRGLFNAIVIDKKYNAWEICLKLAEN
GLLAKPTHGDIIRFSPPLVINESEIRECANIIKKTVESLN
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mRNA from alignment at LSalAtl2s574:694371..695847-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009131-704978 ID=EMLSAT00000009131-704978|Name=EMLSAT00000009131|organism=Lepeophtheirus salmonis|type=mRNA|length=1477bp|location=Sequence derived from alignment at LSalAtl2s574:694371..695847- (Lepeophtheirus salmonis)
ATGAGTAAAAACTGTCTAAGTATTTTTAAAAGTTCTATTCCGAACAGGAA
ATTTGGATTTCGTTCTTTATCTACGAACCAAGTTATCGAAAGAGAAGCCA
AGTATGGAGCACATAATTATAGTCCTATTCCAATTGCCATTGCCAAAGGA
AAAGGGATTTATGTCTGGGATGTTGAGGGCAAGAAATATTTCGACTTTTT
GAGTGCTTATTCAGGTAATAATACTCAGCCATAAGTAATAGGCTAATAAC
TTTATTTTTAATTTATTAAACATAAATCCTATTTAAATCCTTATAATTTA
TACATATGTAACCGAAAATAAGTTAACAATGATTTAAATTATTTTTGAAA
ATCTTATTATAAATTCATTTGTAATATAATACACATACTAATTAAATATT
TTATTATAAGTTTAAATATATATGACTAGTTAATCCAATACTTGTGTCAT
TTTAGCTGTAAATCAGGGGCATTGCCATCCCAAAATCATCAAAGCTCTTC
ATGATCAAGCTGACATTTTAACTCTTACGTCTAGAGCATTCTATAATAAT
GTACTTGGAGAATATGAAGAAAAAGCATGCAAGTTATTTGGGTTTGACAA
ACTTTTGCCAATTAATACAGGTATTTTGGTAAATTAATCAAAAGATAAAT
TTATTTCTATAATGTATCTTTTATTTATGCAAGGAGTTGAAGCTGGTGAA
ACAGGGATAAAATTAGCAAGAAAATGGGGCTATTTAGTCAAAGGAATTCC
CACTAATCAAGCAAAAATTGTATTTTGTACCAATAATTTTTGGGGAAGAA
CAATTGGAGCAATATCTAGTTNNCCGACGGTATGCTCCTTTATGGTGGAA
CCAATTCAGGGAGAAGCCGGTGTTGTTGTTCCTGATGATGGCTATCTCAG
GGAGGKTCGTCGACTATGCACTGAAAACAAAGTATTATGGATTGCTGATG
AAGTGCAAACTGGACTTGGTCGTACAGGAAAACTTTTGGCTTGCGATCAC
GAGAATGTTAAACCAGATATTTTATTGCTAGGAAAAGCACTTTCCGGAGG
TGTTCTTCCCGCTTCAGCAGCTCTAGCAAATGATGAGGTTATGACTACAT
TAAAGCCAGGGCAACACGGATCTACATATGGAGGAAATCCATTGGCATGT
AAAGTGGCGATGGCGGCTTTAGATGTTCTGATCGAAGAAAAGTTGTCGGA
AAATGCCACAAATATGGGGGAAATTCTAAGGGGAGAGCTTAGTAAACTAC
CTTCTGAGATTATTAAAACAGTAAGAGGTAGAGGTTTATTCAATGCTATT
GTTATTGATAAAAAGTACAATGCATGGGAAATTTGTTTAAAATTGGCTGA
AAACGGTTTACTTGCCAAACCAACCCACGGCGACATTATCAGATTTTCTC
CTCCTTTGGTGATTAATGAATCAGAAATACGTGAATGTGCTAACATCATC
AAAAAAACAGTCGAATCTCTCAATTAG
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