EMLSAT00000009147, EMLSAT00000009147-704994 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009147
Unique NameEMLSAT00000009147-704994
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s576supercontigLSalAtl2s576:168118..168734 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009147 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009147EMLSAG00000009147-691913Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040603EMLSAE00000040603-749531Lepeophtheirus salmonisexon
EMLSAE00000040604EMLSAE00000040604-749532Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773744auto773744Lepeophtheirus salmonispolypeptide
EMLSAP00000009147EMLSAP00000009147Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009147

>EMLSAP00000009147 ID=EMLSAP00000009147|Name=EMLSAP00000009147|organism=Lepeophtheirus salmonis|type=polypeptide|length=172bp
MSIILHQHPSRVPVTLRGFVWADPFRSSTWNDFNKTQKKSLEVESREQQE
SKDTNEALNHFINKDNQVMQIKDEENKLEITLDTQQFKPKAVQIYVKDGY
IHVEAKHEESLENGNKYSAQQWVRKYALPKNTLPETVVANLSSEGLLKIA
ATKRKEALTFNQITVPITMNKN
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mRNA from alignment at LSalAtl2s576:168118..168734-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009147-704994 ID=EMLSAT00000009147-704994|Name=EMLSAT00000009147|organism=Lepeophtheirus salmonis|type=mRNA|length=617bp|location=Sequence derived from alignment at LSalAtl2s576:168118..168734- (Lepeophtheirus salmonis)
ATGTCCATAATTCTTCATCAACATCCTTCAAGAGTTCCTGTAACACTAAG
GGGCTTTGTTTGGGCAGATCCCTTTCGTTCTTCAACTTGGAACGACTTTA
ACAAAACTCAAAAAAAATCCTTAGAAGTTGTATGGCGTCAACTTCTAGCT
CWAAAGAAYCACAAGTGAAACRGTGTYCCTGCCGTACTAGAAATACTATA
GAACAAAAATAAGAAAAATAAATCAAGGAATCTAGGGAACAACAAGAATC
CAAGGATACAAATGAAGCATTAAATCATTTTATAAACAAAGACAATCAAG
TCATGCAAATCAAAGATGAAGAAAACAAACTAGAAATAACTTTGGATACT
CAACAATTCAAGCCAAAAGCAGTACAAATTTATGTGAAGGATGGATACAT
TCATGTTGAAGCGAAACATGAAGAGAGTTTAGAGAATGGAAACAAGTACT
CTGCTCAACAATGGGTCAGAAAGTATGCATTACCCAAAAACACTTTACCA
GAAACTGTTGTAGCTAATCTCTCATCTGAAGGTCTCTTAAAGATTGCAGC
AACAAAAAGGAAGGAGGCGCTCACTTTTAATCAGATCACTGTTCCTATCA
CTATGAATAAAAATTAA
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