EMLSAT00000009162, EMLSAT00000009162-705009 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009162
Unique NameEMLSAT00000009162-705009
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s577supercontigLSalAtl2s577:76745..80973 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009162 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009162EMLSAG00000009162-691928Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040663EMLSAE00000040663-749591Lepeophtheirus salmonisexon
EMLSAE00000040664EMLSAE00000040664-749592Lepeophtheirus salmonisexon
EMLSAE00000040665EMLSAE00000040665-749593Lepeophtheirus salmonisexon
EMLSAE00000040666EMLSAE00000040666-749594Lepeophtheirus salmonisexon
EMLSAE00000040667EMLSAE00000040667-749595Lepeophtheirus salmonisexon
EMLSAE00000040668EMLSAE00000040668-749596Lepeophtheirus salmonisexon
EMLSAE00000040669EMLSAE00000040669-749597Lepeophtheirus salmonisexon
EMLSAE00000040670EMLSAE00000040670-749598Lepeophtheirus salmonisexon
EMLSAE00000040671EMLSAE00000040671-749599Lepeophtheirus salmonisexon
EMLSAE00000040672EMLSAE00000040672-749600Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771503auto771503Lepeophtheirus salmonispolypeptide
EMLSAP00000009162EMLSAP00000009162Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009162

>EMLSAP00000009162 ID=EMLSAP00000009162|Name=EMLSAP00000009162|organism=Lepeophtheirus salmonis|type=polypeptide|length=630bp
MRESKGKRDEVRILLIGDRDVGKTSLILSLVSEEFPPEVPGRAEDITIPG
DLTPEKIPTLIADYNALEQNEEALSEELLRADVICIVYAVDDLESLEXVS
DHWIPLIRRTLESQKTPLILVGNKVDLSEYSTMEAVLQMMNEYEEIETCV
ECSAKNLKNISEMFYFAQKAVLHPSAPLFDHQKKDLTTACKRALTRVFML
CDEDNDALLSDEEINKFQRRCFGLDLEPGILENLKSVVHKNCPEGLSKMT
GQLTLSGFLALHGLFIQKGRNETTWTMLRKFGYDEDLTLSRDYLYPSFSA
PSNSIIELSNIGYDFLTFIFEKYDKDSDKAMSPQEIIDLFSTCPVTPWGP
DLYNTVVTNEKGYLSYHGYLALWTFMTFVDTKKTIEYLGYLGYTYSANSG
HEENQISAFSITKDKKVDVGKKPTPRNIYRCNIIGPKGAGKTTFCQGLLG
RSIDDIKNIPSYEIPKHTINSIQVYGQEKYLILEDVDVLNVSSPSIPSES
NCDVCCLVYDASDPRSFEFVAAVFLKYYVDSKVPVLIVANKSDLPSVRQD
YILQPEAFCAKHKLPPPQPYNTKGRVKTDMYVKLATMAAFPHFNQMGLVA
QDTGLLTFGIGIAIAIVTSAVVIKMVRSYT
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mRNA from alignment at LSalAtl2s577:76745..80973+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009162-705009 ID=EMLSAT00000009162-705009|Name=EMLSAT00000009162|organism=Lepeophtheirus salmonis|type=mRNA|length=4229bp|location=Sequence derived from alignment at LSalAtl2s577:76745..80973+ (Lepeophtheirus salmonis)
TATAAATCCATTTGCACTCAAGTAAAAAAAAGCAAACGTCAAAAGGTAAT
ATTGTTCCGTATAAAGCATTAAACCATGCGTCTCGTGCATGTCCATGATT
AAACCTTTAGCTCTATATTTATTTCAGTGTTCGCTGGCTGAGGTTGCGCA
GTAGATCTGATGCCGGCATCTCCAGCTAGATATTTTTAAATGTGTGTGTA
CATGATGACGTCATCCATATTGCATTATTATTCCTTGTCGTCATGTGTGA
AGGACTATGACAAACTGAGCAACTGCAAATGACTTGAGTGATATAAAAAT
AAACCATTAGTTTTGAACATCCATGACCTGGACAACTGAGTGATAGTGGA
GCCACCCCTACTCGGATTCGTACAATACTATTCAATTACTTATTAGATTT
CAATTGAACAAGGAATTATGAGGGAAAGTAAGGGGAAGAGGGACGAGGTT
CGAATCCTTCTTATTGGGGATAGGGACGTAGGAAAAACATCTCTAATTTT
GTCTCTCGTGAGTGAAGAATTTCCTCCTGAGGTTCCCGGGAGAGCTGAAG
ACATAACAATCCCTGGGGACTTGACTCCTGAGAAGATCCCAACACTAATA
GCGGACTACAATGCATTGGAGCAAAATGAAGAGGCTCTTTCTGAGGAATT
ACTCCGTGCAGATGTTATTTGTATTGTTTATGCAGTAGATGATTTGGAGT
CACTTGAAYCGGTCTCTGATCACTGGATACCTCTGATACGACGTACACTC
GAGTCCCAGAAAACTCCTCTCATTCTTGTTGGGAATAAAGTAACTACAAA
CTTGACCCCTTTCTAATAAGACTCTCTTGCATTTCTATCTCTATTTGGAT
TTCCAGGTTGATTTGTCAGAATATAGCACCATGGAAGCAGTTCTTCAAAT
GATGAATGAATATGAAGAGATTGAGACATGCGTTGAATGCTCTGCAAAAA
ATCTTAAAAACATTTCTGAAATGTTTTACTTTGCTCAAAAAGCCGTACTC
CATCCCTCCGCTCCACTCTTTGATCATCAAAAGAAGGACGTGTGTTCTTA
TTTCCTCTCTCTCCCTTTTATAATTATCTAAATTGTCCTTGTTATTATTT
ATGTATTACAGCTAACTACAGCTTGCAAAAGAGCATTGACTCGAGTATTT
ATGCTCTGTGATGAAGACAACGATGCTTTACTTTCAGATGAAGAAATCAA
CAAGTTTCAAAGACGTTGCTTTGGGTTAGATTTAGAGCCTGGGATTTTGG
AAAATTTAAAATCCGTTGTTCATAAAAATTGTCCTGAAGGTCTATCCAAA
ATGACGGGCCAATTGACATTGTCTGGATTTCTTGCTCTTCATGGACTTTT
TATACAAAAAGGAAGAAATGAAACGACATGGACAATGTTGAGAAAGTTTG
GTTACGATGAAGACCTTACTCTATCCCGCGATTATCTATATCCATCGTAA
TTTGTTTAATGAATTATGTTTTTACATTTTCAAGTTCCATATTTCTGATT
TAACTTTTCAGATTTTCCGCTCCATCCAACTCCATAATTGAATTATCTAA
CATTGGCTATGATTTTTTGACTTTTATTTTTGAGAAATATGACAAGGATT
CGGATAAAGCAATGAGCCCGCAAGAAATCATCGACCTTTTTTCTACGTGT
CCCGTTACTCCTTGGGGACCAGATTTATATAACACAGTGGTAACTAATGA
AAAAGGTTACTTGAGTTATCACGGATATCTAGCTCTTTGGACTTTTATGA
CATTTGTTGATACAAAAAAGACAATTGAGTACTTAGGGTACTTAGGCTAT
ACTTATTCAGCTAATTCTGGTCACGAAGAAAATCAAATCAGTGCTTTTTC
CATCACAAAGTAATTATCGAATGATTAATTATTTAGGCATCAGGTTTACT
GTCATTTAAATATGTATGTATGTAGAGATAAAAAAGTGGATGTTGGCAAG
AAACCAACGCCTCGAAATATTTATCGATGCAATATCATTGGTCCCAAAGG
AGCCGGAAAAACGACGTTTTGTCAAGGATTGTTAGGTCGTTCCATTGACG
ATATTAAGAATATTCCGAGCTACGAAATTCCAAAACATACGATAAATTCG
ATTCAAGTTTATGGTCAAGAAAAATATCTTATATTGGAAGGTAAAATGCC
TCCTTCTGATTTTACTGAAATTGTATTTTTGATCCAGCTGAGGGCATCAT
GAGCTATCATTTTTATAATTAAATTATTTTATGCTATTCTTTTTACTTTT
ATTAGATGTGGATGTACTAAATGTGTCCAGTCCAAGTATACCGTCTGAAT
CAAATTGTGATGTCTGTTGTCTTGTCTATGATGCATCCGATCCAAGATCT
TTTGAGTTCGTTGCAGCTGTATTTTTGGTATGCATTAATATATTTTTATT
GAACATACTCAAAAGGATGCTTTAATTTAATTTTTTTAAATTTTAATGTC
ATCATTTTGAATCATGACCCCCTCGAGTCTTTTTTAGGTGTTTTATATAA
TTTTTATGAAACATATTTATTGATTAATTACTATTTAAACTAAAAAAAAG
ATAATTTTTAATTCCTTTTACAAGTTCTACTTTCTCTCCCGTACTCCTTA
TCATCATTGTTGAGCTCATATTAGTACATACATATTTCGGCAGTTTGTGA
GGTTATATGATTTTTTTTTCAATCAAATTTCATTTAGAAAATCAAAAAAC
AATTTTATGGAATAAATACGTCGATAATCTGATTAAAAAACTAAGCAATT
AAGCCCAGTGAGTTAACATGTACTTTTTTTAAATTATTGGGGGTTCGAAG
CACTTGGGATAAGTATAAAATTTGGTATTGTTCTCATCTGGATTTGACTG
TATTTACAAAAACATAATCATTACGTTAATGTATAAAAACATTTATTTAT
TTTAGAAATATTATGTTGATTCTAAAGTTCCGGTGTTAATAGTAGCCAAT
AAGAGTGACTTACCTTCAGTTCGTCAAGATTACATTTTGCAACCTGAAGC
TTTTTGTGCCAAACATAAGGTAATATTTTTTTAAAGATATTATGAGCTAA
TTATTGCCATGTTTTGAGCTTAAAATTCTAATTTAGATATTGGTGTTTTA
GAATATATGTAATGTTTTAGTCTTCAAAATCATTTATTTTTTCTCAGTTA
CCACCTCCTCAGCCTTACAACACCAAAGGAAGGGTTAAAACAGATATGTA
CGTCAAACTCGCAACCATGGCAGCATTTCCGTAAGTCTAAGGAAATATCT
CATTATTTGTTTGTTTTTGATTTTTGAGCAACCTCGGCATTTCAAAAATG
TTAATAATATTCTATGTATTTCTAGTCATTTTCAAGCAGCTTGGACTCTT
TTCTATAAAGGATGGTAAAAAATCACTCAAATTTTATTGTAGTTTATCTC
MCAGCCAATAATTATTATTTTCCGTACTTTATAATTAATTATTTTTTGTT
GCTAATCAACAAATTTTAATTGGGCGAGGAGGGGTTCCAAGCTGAAGTCA
AAGTAATTTAATAATAATTCCATTCTTAATTTATCTTCATATTTTTTTTT
TTGATAAAAACTAATAAATGATTTAACTTATTTATATACACATATATATA
TATGTTTAGTAATCTAAGAAGATTGGTACACGCTATGATTATGAAAAGCT
CACCTCGTGAGTGGATTGGTAGTTTCAGATATTTKACAACGTAAGTTTAA
GTTCAAATTGTTTTTTTTGTGAAATTATTTGTCAAAATTTTAAAAGATTG
ATGCATTTGGAACCCTATATATGTATTTCATTCATTATTTCTGAATATAT
TTGATATATAACTTTTCAGCTATCACTTAAATAGTAAAAATACTTTTAAA
AAAATAGTGATTCAATCTCTATTTTCATTTAGGCACTTCAATCAAATGGG
TCTGGTTGCCCAGGATACTGGATTGCTCACGTTTGGAATTGGTATCGCTA
TTGCTATAGTCACTAGTGCAGTTGTAATTAAAATGGTTCGAAGCTACACT
TAAGGCCTAATAAAGGACTCCATTGTATTTGTAGTTCGTGATGTTGATCT
GCTCAAATTTGCCTTAGATTCAATCTTACACTGCAAAGGCCTGTCGTATC
CTTTTTAATTTATTATGAAGTATAGTTATAGTCCTTATTAATTTTATAAA
ATATTATAGATAACACTCTTTCAAAATATATAATATGACGTTGATGGTCC
CCAAGTTGGATTTATATTTTGGCATAGAC
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