EMLSAT00000009238, EMLSAT00000009238-705085 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009238
Unique NameEMLSAT00000009238-705085
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s588supercontigLSalAtl2s588:466746..467909 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009238 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009238EMLSAG00000009238-692004Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041009EMLSAE00000041009-749937Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777941auto777941Lepeophtheirus salmonispolypeptide
EMLSAP00000009238EMLSAP00000009238Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009238

>EMLSAP00000009238 ID=EMLSAP00000009238|Name=EMLSAP00000009238|organism=Lepeophtheirus salmonis|type=polypeptide|length=387bp
MGPSGGSNPTSNAAVHERNYCLRLNDYEKKYAESFRSLRDDESFADVTLV
AGCSSEDDSSTSFKAHRVILSACSSYFHSLLIKTLSPWHVHPVLLLTDVR
PRDLHALLDFMYLGQVNINNEALSSFLAVAQRLRIKGLCETTFQIPKKDP
VYVATGHGKRAKFMTTTTSSVLRSTTQQIIQQHPHKTTDAPIILATSAAN
QEEVPSSAVTEFISSNDGEFIPSLPSHPFMINTDPTTPTPAAMVTIEDKM
NEPQDLTPTHTEVISPSTPKKDRNNRKTCGYCHKDFHEMSLKRHIKDVHF
KNENTFVICPQCCKQYASQNSLYSHLNRVHGVKKEMMEGIQIQNVTGNAG
TPGGGNITVPSGGTPETASSPSDGIMDLAHHSDSSNE
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mRNA from alignment at LSalAtl2s588:466746..467909-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009238-705085 ID=EMLSAT00000009238-705085|Name=EMLSAT00000009238|organism=Lepeophtheirus salmonis|type=mRNA|length=1164bp|location=Sequence derived from alignment at LSalAtl2s588:466746..467909- (Lepeophtheirus salmonis)
ATGGGCCCTTCGGGAGGGTCCAATCCTACCTCCAACGCCGCAGTGCATGA
GAGAAACTACTGTTTGCGGTTAAACGATTATGAGAAGAAATACGCGGAGT
CTTTCCGTAGTTTGCGAGACGACGAATCTTTCGCAGACGTCACATTGGTT
GCGGGCTGTTCCTCTGAAGACGACTCGTCCACGAGTTTCAAGGCCCATCG
TGTGATTCTGAGTGCATGCTCCTCCTATTTCCATTCACTTTTAATAAAGA
CACTGAGTCCCTGGCATGTGCACCCTGTTCTACTTCTCACGGACGTCCGC
CCCAGAGATCTTCACGCCCTACTTGATTTTATGTATTTAGGACAGGTGAA
CATCAACAATGAGGCCCTGAGCTCCTTCCTTGCTGTAGCACAAAGATTGC
GCATCAAGGGACTTTGTGAGACGACTTTTCAAATACCTAAAAAAGACCCA
GTCTACGTGGCCACGGGTCATGGTAAACGAGCCAAGTTCATGACGACCAC
CACTTCCTCTGTTCTACGTAGCACAACTCAACAAATCATTCAACAACATC
CCCATAAAACCACAGATGCTCCCATAATACTTGCTACATCCGCTGCGAAT
CAAGAAGAAGTCCCCTCCTCCGCTGTAACTGAATTTATATCTTCCAACGA
TGGGGAATTCATACCTTCACTTCCCTCTCATCCTTTTATGATTAACACGG
ATCCAACAACACCCACACCCGCTGCAATGGTCACGATTGAAGATAAAATG
AATGAACCTCAGGATCTAACTCCAACACACACTGAAGTTATATCCCCATC
CACACCCAAGAAAGATCGCAATAACCGCAAGACATGCGGCTATTGCCATA
AAGACTTCCATGAAATGTCTCTCAAAAGGCACATAAAGGACGTTCACTTT
AAGAATGAGAATACTTTTGTCATCTGTCCACAATGTTGTAAACAATATGC
AAGCCAAAATTCTTTATACTCTCATTTAAATAGAGTCCATGGCGTCAAAA
AGGAAATGATGGAAGGGATTCAGATACAGAATGTTACAGGGAATGCTGGT
ACTCCAGGTGGTGGGAATATCACTGTCCCCTCAGGTGGTACTCCGGAAAC
TGCATCTTCGCCCAGCGACGGAATTATGGATTTAGCTCATCACTCGGATA
GTTCAAATGAATAA
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