EMLSAT00000009287, EMLSAT00000009287-705134 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009287
Unique NameEMLSAT00000009287-705134
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s594supercontigLSalAtl2s594:464839..467515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009287 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009287EMLSAG00000009287-692053Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041204EMLSAE00000041204-750132Lepeophtheirus salmonisexon
EMLSAE00000041205EMLSAE00000041205-750133Lepeophtheirus salmonisexon
EMLSAE00000041206EMLSAE00000041206-750134Lepeophtheirus salmonisexon
EMLSAE00000041207EMLSAE00000041207-750135Lepeophtheirus salmonisexon
EMLSAE00000041208EMLSAE00000041208-750136Lepeophtheirus salmonisexon
EMLSAE00000041209EMLSAE00000041209-750137Lepeophtheirus salmonisexon
EMLSAE00000041210EMLSAE00000041210-750138Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777913auto777913Lepeophtheirus salmonispolypeptide
EMLSAP00000009287EMLSAP00000009287Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009287

>EMLSAP00000009287 ID=EMLSAP00000009287|Name=EMLSAP00000009287|organism=Lepeophtheirus salmonis|type=polypeptide|length=684bp
MDEKEKGFNLDLSDSFSSLSKESFIDSLSALSLEYGGSLWDLWVQMGCSS
GSSGAYRXQVVHNCLEEKFKAMMQEEEGHRSALFKNIEEHYKKLYSLSKE
LGISLEEPPAALSIIFLEKDLRDKVENLLQKKKERLSQLTSYVKQDVKLG
EMLAEEPYSITLHNIPSKEEELSLKKHVIYLTELKQERLSTFKAYKKSFA
DLLIKLDIEPANSFERAIFCETDESFLPLSEVRLCSVAKTIERLESQVQQ
NMRETERMRCRIRNVASKLELDEREISDFLHENPGFSSNELKALQFRLDE
LEVLKIEHMERFIVSSRKELREWWKKCFYNEKQQSLFSAFYSTIYSEELL
TEHEEEIEKIRTYYYNNEFLFHMVEQRHALWEKKLELEKKAKDPNRFNCK
STKFLKEEKDRRRVEKDLPKIEKCLEDAMDDYRLENGIEFLIGGLPYLTY
MEIQIKEHEDSIQREKVKKANAKKQLLIQESRYGSTPAKLNSTKRKAPNT
SDNSVTKRYKSDVTRGTVNSTRSSTRSTLTRSTSTRCNSTRSNLSRRRNI
LQSSIVVGSSEFKMTLSSLGDKDPFLNPLAINANSTRQTEMVRKLGQNTN
ITGEYLFFCRTPHNIKQTPKTTLATRGRAFNRRSRSAVQLSSKKSLVINV
SAKKSLFKTPSSKRVLTPINSFIRSSTLRARKKL
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mRNA from alignment at LSalAtl2s594:464839..467515-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009287-705134 ID=EMLSAT00000009287-705134|Name=EMLSAT00000009287|organism=Lepeophtheirus salmonis|type=mRNA|length=2677bp|location=Sequence derived from alignment at LSalAtl2s594:464839..467515- (Lepeophtheirus salmonis)
ATGGACGAGAAGGAAAAAGGATTCAACTTGGATTTGAGCGATTCTTTTTC
CTCCCTAAGTAAAGAGAGTTTCATCGACTCTTTGAGTGCCCTGAGCCTCG
AGTATGGAGGAAGTCTTTGGGATCTGTGGGTACAGATGGGGTGCAGCAGT
GGTAGCTCTGGGGCATACCGAGMGCAGGTGGTGCACAACTGTCTGGAGGA
GAAATTCAAAGCCATGATGCAGGAGGAAGAAGGACATCGATCTGCGCTCT
TCAAGAACATCGAAGAGCACTACAAGAAGCTCTACTCCCTCTCGAAGGAG
TTGGGCATTTCTTTGGAAGAGCCTCCAGCGGCTCTGTCTATAATTTTCCT
GGAAAAAGATTTACGGGACAAAGTGGAGAACTTGCTCCAGAAGAAGAAGG
AGCGCCTAAGCCAATTGACATCTTACGTGAAGCAAGATGTGAAACTGGGT
GAGATGCTCGCGGAAGAGCCGTACTCCATCACTCTCCACAACATTCCCTC
CAAAGAAGAAGAACTCTCTCTCAAGAAGCATGTGATCTACCTTACGGAGC
TCAAGCAAGAGCGTCTCTCCACCTTTAAGGCATACAAAAAGTCATTTGCT
GACTTATTGATCAAATTAGACATCGAGCCCGCCAATTCATTCGAGCGAGC
TATTTTCTGTGAGACAGACGAATCTTTTCTCCCTCTCTCGGAGGTGAGAC
TTTGCTCTGTGGCTAAGACGATAGAAAGGTTGGAGTCTCAAGTCCAACAA
AATATGAGGGAAACGGAGAGAATGAGGTGTAGAATAAGAAATGTTGCTTC
AAAGCTCGAATTGGACGAAAGAGAAATTTCAGACTTTCTCCACGAAAACC
CTGGGTTTTCTTCGAATGAGCTCAAAGCAGTAAGTTTCTATGATATTCAT
TCATTCGATACCTTACCTTTTAATTTTTGAATTAGTTACAATTTAGATTG
GATGAGCTGGAGGTTCTTAAAATTGAGCATATGGAACGCTTTATTGTTTC
TTCCCGAAAGGAATTACGGGAATGGTGGAAAAAGTGTTTTTATAACGAAA
AACAACAATCCCTTTTTTCAGCCTTTTATTCAACTATTTATTCCGAGGAA
CTGCTAACGGAACATGAGGAAGAAATTGAAAAAATTAGAACATACTATTA
CAATAATGAGTTTTTATTTCATATGGTTGAACAGAGACATGCGTTGTGGG
AGAAGAAATTAGAATTGGAGAAAAAAGCTAAAGATCCAAATAGATTTAAT
TGCAAGAGTACAAAATTTCTTAAAGAGGAAAAAGATCGAAGACGAGTGGA
GAAGGTTAGTAGACAAAAATAAATTAATTCATTAGCGTATTTTAATTTCA
TTTATACTTGTAATAATAATGGACTTTAAACTTACAGGATCTTCCCAAAA
TTGAAAAATGCTTGGAAGATGCAATGGACGATTATAGATTAGAAAATGGA
ATCGAATTCTTAATTGGAGGATTACCTTATCTAACATATATGGAAATTCA
AATTAAAGAACATGAGGATAGTATACAAAGGGAAAAAGTTAAAAAGGCAA
ATGCTAAAAAACAACTTCTGATTCAAGAGTCAAGGTATGGATCTACACCA
GCTAAGCTCAACTCAACTAAAAGAAAAGCACCAAATACTTCTGATAATAG
TGTCACTAAAAGATATAAATCCGATGTAACTCGTGGTACCGTCAATTCTA
CTAGATCTGTAAGTTATTTTATCTCCAATAAATGATTCTACATAAAGTTA
AATTACACTTTTTAGTCTACACGGTCTACATTAACTAGATCAACATCTAC
TCGTTGCAATTCCACGCGGTCTAATCTATCAAGACGTCGAAATATTCTGC
AATCTTCTATTGTCGTTGGATCTAGTGAATTCAAGATGACGCTGAGCTCT
TTGGGAGATAAAGATCCATTCCTTGTAAGTGTATATCAAATGACTATTTA
TGTTATATATTGTGTTTTTTTCAATAGAATCCACTTGCAATAAATGCTAA
TAGCACACGACAAACAGAGATGGTGAGACAAATGTTTAATTAAAGTTATT
TCCGAATTAGCTGTTAACTTACATATATTACAATATGCATTTATGTACTT
TTTTGGACGATACAAATATATACCTACATACATATATGTTTGTTTTCGTT
GTTAGTGCATAATTGTTAACTTAGTTCGTACTCAAAGTCCCATTTATTGA
CATGGGAGAGTCTATTTTATACATTCAATTTATTATTTTTTAGGTACGTA
AACTTGGACAAAATACAAATATAACTGGTGAATATCTGTTTTTTTGTAGA
GTACTCATTTTTTTTTAAACTCCTAATTCAGATTATAACATTAGTTTAAC
TCTTAATTTTAGCATGTAGAGTGCTTAGACAGCTATTCATCTAATATTTT
ACCTGTTACAACCGTAATAAAATGATGATTTTTTTTATTATTATTGTTGC
AGACGCCCCATAATATAAAACAAACGCCAAAGACAACTCTTGCAACTCGA
GGAAGAGCTTTTAATCGTCGTTCTAGATCTGCTGTTCAACTTAGTTCTAA
AAAATCTCTTGTAATCAACGTCAGTGCTAAGAAAAGTTTATTTAAAACTC
CATCTTCAAAAAGAGTTTTAACACCCATAAACTCATTTATTAGAAGCTCA
ACTCTGAGAGCCAGAAAGAAGCTCTGA
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