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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s598 | supercontig | LSalAtl2s598:263887..269069 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000009347 >EMLSAP00000009347 ID=EMLSAP00000009347|Name=EMLSAP00000009347|organism=Lepeophtheirus salmonis|type=polypeptide|length=1546bp
MKEIEFDIRNDGSCFGHKDWFDSFYSVIFRFHEELPTNIKATTHDCLLNA
GDQLLQRVDSILNEQDPGASSFLLEPLHFRISAASLPGKGRKKNSTSGYD
WAGXXWEXSRMSAINFMYKILQLNVNRLFTPPVAEEDFINCIANAGFRIL
ENPVMAHQRNRSVRMSVIQVLSSLNSRFDYSLSCSFKLVQELKLFEHMVS
PLAEAVEVFXKEFNCKSIVMEIIQEISRLDMKELNRDTSATRSYSLFLFE
LTEKLPEYVRPSLSLLIVHLDGDSYMMQDLDEKSKDNRNQFLEYLEDHIH
DINAHVRSSVLSIWSKLCVAKSIPLGRQYSVLKLTMGRLLDKSSNVRKQA
VQLLTSLLQCNPYTFSLPIEELESQLNAESKKLQDLEGLIDKEQKKWDNE
DIELHLKEILESDDYGKENLPKEIVWDGAVHGEVSRRIKHLITRKTYINA
IALLMDARIKFPDEFSAESETISSLKDIYFSASMYDQPDEEALTKQRILV
AYLKDSVSFGKLMNDSLPIMCQLLGSKQSTDILEAIDFFVTAFEFGILNA
MMGVRKMLSLIWSNESVVKEAVVKAYRRLYIDVGTRSGGASQIVKNIIAL
VRGSTLGECTSLEALVGMLVETKDIGKECFQILWQIFTLVMPDSNEESSC
DAIMILGMIGLKDPSVVSSNVSIIIEHAFGERGLNNFQLVCEACKSLLKI
VPRHKSDDLETPFRYDSDDKLFESLHKIIGITRCESQNYIPMVKVAVTVI
YEFSEHPDRRMAQIALDLICAVCDDNNINMTEIKRLVYVAGQIAVCQLKH
LDISIFCEMKRRNHLREMKKEKKRKRKSVANIPNSASETPRNGNNDDDEL
VGAEGDDAEAEFIRNICENETVTGGNLLSHFVPFIVSLCSSQEHDDSLKT
VAALTLSKFMLVSNEFCDQHLRLFFTLLEKSKNETTRANMIIAAGDLSVR
FPNTLEPWTPRMYARLRDESSLVRSNTLTVLTHLILNDMIKVKGQISDMA
LCIIDKVDRISSMAKLFFTELARKGXSLYNVXPDIVSRLSSPEVGVPEEE
FREIMKFIICLIEKDKHLESLVEKMCHRFRVTKTDRQWRDLSYCLCSFSF
NDKAVKKLSDNFNCYSDKLYIQDVYDSLTSILVLAKKTVKNETKVIIEEL
EGKIEEAHERGLEDHTANERANKAKAGKANEELDEEEFNDATPLNNTDHS
PGVNGIRSNNKENVHCSPTVSSNMLSNEMRSSRRRRNNGQDNEHERVIST
PRNSVKHKKIAGLLDSDDEVSFHPRSLPKVRVTKNDEETANKNRRKTVNY
DPSLTPGVFTKFKEFKSLRNKRLTDKNTKDSSDDSEEDNNQSSSSIPNKK
KSSIIRTNSSKRKSVNKSFDNGSSEEEFSVRSSNKKTRTTATPVKSLRKK
KSSPIEELSSKKETISSVKKISTRSNRLEPPVSEDSPKKSSPEERINAII
KNKIPVLKLTRIESLRNGPYNNKSSPRDSSISRKSPHIETKSLSPSTETF
RRSSPRLKREASSSPGIHLKKKGTTKGDTTEQNSTTSSRNKLSRKK back to topmRNA from alignment at LSalAtl2s598:263887..269069- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000009347-705194 ID=EMLSAT00000009347-705194|Name=EMLSAT00000009347|organism=Lepeophtheirus salmonis|type=mRNA|length=5183bp|location=Sequence derived from alignment at LSalAtl2s598:263887..269069- (Lepeophtheirus salmonis)
ATGAAGGTTTGTTTATCCAAATTTGTAAAGGAGTTTGACGTTTCATTTTT
TGCATTAATAATCATAGGAAATTGAGTTTGATATTCGTAACGATGGATCT
TGCTTTGGACATAAGGATTGGTTTGACTCATTCTATTCCGTCATTTTCCG
GTTTCACGAGGAGCTGCCCACCAATATCAAAGCAACAACTCATGATTGTC
TTCTCAACGCGGGAGATCAACTGCTTCAACGGGTGGACTCCATCCTCAAT
GAACAAGATCCAGGTGCCTCAAGCTTTCTTCTAGAGCCTCTTCACTTTAG
AGTTCATACTTTCAATTCACTTAATCCACTCATTCTTGATCTTAATAACA
CTCATATTAGAGTTCCATCAGAGTAATAGCGATTTTCAGTACCTACAACA
CATGAAATATTTAATAAAACTATGTATTAGAAGGATTTATATCCTTTTAT
TTGCTGGTCCCATTTTCACATCTAACATTTGAGTGTTGTCCTTACTACTA
ATCAAAGAGGGATTTTATTTTTATAAAACTTGATAATTAGTGCCTCTAAA
ATGCTTGACGTCCCATGAAAACGCTAATAGCTTTGAATTAATCCTATTTT
TCTTTTCTTCAGATCCGGAAGCGAAATTAGAATGTCTCAATGATATGAAA
ATGATTGTTTATCTTATAANNNCAACTCACGGAACTCATTGAACGGGAAA
CTGTTGAAAAATCATCTCAGATATCCGCTGCATCCCTTCCGGGAAAGGGA
AGAAAGAAAAACTCTACGAGCGGATATGACTGGGCAGGYAWGYATTGGGA
GMCTTCCCGAATGAGTGCTATTAACTTTATGTATAAAATTCTACAACTCA
ATGTCAATAGACTCTTTACTCCACCTGTAGCAGAGGAGGACTTTATTAAT
TGCATTGCTAATGCAGGTTTCAGAATTTTGGAAAATCCTGTAATGGCCCA
TCAGCGAAATCGAAGTGTGCGGATGTCCGTGATTCAAGTATTAAGTTCAT
TAAACTCGCGCTTCGATTACTCCTTATCATGTAGTTTTAAACTAGTTCAA
GAATTGAAACTTTTTGAACATATGGTKTCTCCTCTCGCAGAGGCGGTTGA
AGTCTTTGNCAAAGAGTTTAATTGCAAGTCTATCGTCATGGAAATCATTC
AAGAAATTTCGAGGTTAGATATGAAGGAGCTAAATAGAGATACTTCTGCT
ACGAGATCCTATTCACTTTTCTTATTTGAACTCACTGAAAAACTCCCCGA
GTATGTAAGACCTTCATTAAGTCTATTAATCGTTCATTTGGACGGGGATT
CTTACATGATGCGTAAAAGNNATATTGGGCATACTAGGAGAGATTGTAAT
TAAAGTTCTATCTAAAGAAGATCTCGATGAAAAAAGTAAAGACAATCGCA
ATCAGTTCTTAGAATATTTGGAAGACCATATTCATGACATTAACGCCCAC
GTAAGATCGTCAGTACTTTCAATATGGAGTAAATTATGTGTGGCTAAGTC
GATACCATTGGGCCGTCAATATAGTGTACTAAAGTTAACTATGGGTCGGC
TACTCGACAAATCTTCCAATGTTCGTAAACAAGCCGTTCAACTTCTTACT
TCCCTGCTTCAGTGTAATCCTTATACGTTTTCCCTTCCTATTGAAGAACT
TGAGTCTCAACTAAATGCCGAATCTAAGAAATTGCAAGATTTGGAAGGGT
TGATAGACAAAGAACAAAAAAAATGGGATAATGAAGATATTGAGTTGCAT
TTGAAAGAAATATTAGAAAGTGATGATTATGGCAAAGAAAATCTTCCGAA
AGAAATTGTTTGGGATGGAGCAGTTCATGGTGAAGTTTCGAGAAGAATTA
AGCACCTTATAACACGTAAAACTTATATCAATGCAATTGCTCTCTTAATG
GATGCTAGGATCAAGTTTCCCGATGAATTTTCGGCTGAATCGGAAACAAT
ATCCAGCCTTAAAGATATATATTTTTCTGCATCTATGTATGATCAACCCG
ATGAAGAAGCTTTGACTAAACAAAGAATTCTTGTTGCTTATCTCAAAGAT
TCTGTCTCTTTTGGAAAACTTATGAATGACTCACTTCCTATTATGTGCCA
ACTTCTAGGATCAAAGCAATCCACTGATATTCTCGAAGCTATTGATTTCT
TCGTTACAGCATTTGAATTTGGTATTTTAAATGCTATGATGGGCGTTAGA
AAAATGTTGTCTCTTATCTGGTCGAATGAATCAGTTGTGAAGGAGGCTGT
TGTCAAGGCATACAGGCGTCTCTATATTGATGTTGGCACTAGATCTGGAG
GAGCTTCTCAAATAGTCAAGAATATTATTGCTCTTGTAAGGGGATCCACT
TTGGGCGAATGTACATCACTTGAAGCTCTAGTGGGTATGTTAGTTGAGAC
GAAAGATATAGGAAAGGAGTGTTTTCAGATTCTTTGGCAAATATTTACAC
TCGTTATGCCAGATTCTAATGAGGAATCATCATGTGATGCTATAATGATA
CTTGGAATGATTGGTCTCAAAGAYCCCTCTGTTGTGTCTAGTAATGTTAG
TATCATTATTGAGCATGCTTTTGGAGAACGAGGCCTAAATAATTTTCAAC
TGGTTTGTGAAGCATGTAAATCTCTTTTAAAAATTGTTCCCCGACATAAA
TCGGATGATCTTGAAACTCCATTTAGATACGATTCTGATGATAAACTTTT
CGAATCTCTACATAAAATCATTGTNCCAGGGTATAACCCGTTGTGAGAGT
CAGAATTATATTCCCATGGTGAAAGTCGCTGTAACTGTTATCTACGAGTT
TTCTGAACATCCAGATCGGCGTATGGCACAAATAGCATTAGACTTAATTT
GTGCAGTCTGCGACGATAATAACATTAATATGACGGAAATAAAGAGATTA
GTATATGTTGCAGGACAAATTGCCGTGTGCCAACTCAAGCATTTAGATAT
CTCAATTTTTTGTGAAATGAAGAGGCGAAACCATTTGAGAGAGATGAAAA
AAGAAAAGAAACGGAAACGCAAGTCCGTTGCTAATATTCCTAACAGTGCA
AGTGAAACTCCAAGAAATGGTAATAATGATGATGATGAACTTGTTGGAGC
CGAAGGAGATGATGCAGAAGCGGAGTTCATCAGAAATATTTGTGAAAATG
AAACTGTCACTGGAGGGAATCTACTATCACACTTTGTTCCATTTATCGTA
AGTCTCTGCTCTTCTCAAGAGCATGACGATTCTCTAAAAACGGTTGCAGC
TTTAACTTTATCCAAATTCATGCTAGTTTCAAATGAATTTTGTGATCAAC
ATCTTCGTCTTTTTTTTACTCTTTTGGAGAAAAGTAAGAATGAAACTACT
CGTGCGAATATGATAATAGCAGCAGGAGATCTTTCCGTTCGGTTTCCTAA
TACGTTAGAACCTTGGACTCCCAGGATGTATGCTAGATTACGAGATGAAT
CCTCTCTTGTCAGAAGTAACACATTAACTGTTCTTACTCATCTCATTTTA
AATGATATGATAAAAGTAAAGGGGCAAATATCAGATATGGCTCTATGTAT
TATTGACAAGGTGGATCGAATTTCTAGCATGGCTAAGTTATTTTTTACTG
AATTGGCTAGAAAAGGAAAWTCTCTATATAATGTTATNCCTGATATCGTT
TCACGACTCTCCAGCCCTGAAGTTGGAGTTCCCGAAGAAGAATTTAGGGA
AATAATGAAATTTATTATATGTCTAATTGAGAAGGATAAACATTTAGAGT
CTCTTGTTGAAAAAATGTGTCACCGGTTCAGAGTCACTAAAACAGATAGA
CAATGGAGAGATTTGTCATACTGCCTCTGTTCCTTCAGTTTTAATGATAA
AGCAGTTAAAAAGCTCAGTGATAATTTCAATTGTTATAGTGATAAACTTT
ACATTCAAGACGTCTATGATTCTCTAACTTCCATTCTAGTGCTTGCCAAA
AAGACTGTTAAAAACGAAACTAAAGTTATTATCGAAGAGCTCGAAGGAAA
AATTGAAGAGGCGCATGAAAGAGGCTTAGAAGACCACACTGCAAATGAAA
GAGCTAATAAGGCAAAAGCTGGTAAAGCCAATGAAGAACTAGACGAAGAA
GAATTTAATGATGCCACCCCTTTGAATAATACAGATCATTCTCCTGGGGT
GAATGGGATACGTTCTAATAATAAAGAAAATGTACATTGCTCCCCCACTG
TAAGTAGTAATATGCTGTCTAATGAAATGAGATCATCAAGAAGAAGAAGA
AACAATGGTCAGGATAATGAACATGAAAGGGTTATTTCTACACCTAGAAA
TTCGGTAAAACACAAAAAAATCGCTGGCTTGTTAGATAGTGATGATGAAG
TTTCTTTTCATCCTCGTAGTCTACCCAAAGTGAGGGTAACTAAAAACGAT
GAAGAAACTGCTAATAAAAATAGGAGAAAAACTGTAAACTATGATCCAAG
TCTAACTCCAGGTGTTTTTACTAAATTTAAGGAATTCAAGTCTCTCAGAA
ATAAGAGACTCACAGATAAAAACACGAAAGACTCTTCTGATGATTCAGAA
GAGGATAATAATCAATCCTCCTCCTCTATTCCGAACAAAAAGAAAAGTAG
CATCATCAGAACGAACTCAAGTAAGCGGAAATCTGTCAATAAATCCTTTG
ACAATGGCTCTTCTGAAGAGGAGTTTTCTGTAAGGTCTTCGAACAAAAAA
ACAAGAACCACTGCTACACCTGTAAAATCTCTACGAAAGAAAAAATCTTC
ACCAATTGAGGAGTTGAGTAGTAAAAAAGAAACCATAAGTTCCGTAAAAA
AGATAAGTACAAGATCCAATAGATTAGAACCACCTGTATCGGAAGACAGC
CCAAAAAAATCTTCTCCTGAGGAAAGGATTAATGCAATTATAAAAAATAA
AATACCTGTCCTCAAACTTACAAGAATTGAGTCTCTTCGAAATGGACCCT
ATAACAATAAGTCTTCACCTCGGGACTCCTCCATTTCACGTAAATCCCCT
CATATTGAGACTAAGTCTCTATCTCCTTCAACTGAAACTTTTCGTCGCTC
TTCTCCTCGATTAAAACGCGAAGCTTCATCCTCTCCTGGAATCCATTTGA
AAAAGAAAGGAACGACGAAAGGAGATACTACAGAACAGAATTCAACTACA
TCCTCGAGAAACAAATTAAGTCGGAAAAAGTAA back to top
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