EMLSAT00000009366, EMLSAT00000009366-705213 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009366
Unique NameEMLSAT00000009366-705213
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s599supercontigLSalAtl2s599:317728..318678 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009366 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009366EMLSAG00000009366-692132Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041634EMLSAE00000041634-750562Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776310auto776310Lepeophtheirus salmonispolypeptide
EMLSAP00000009366EMLSAP00000009366Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009366

>EMLSAP00000009366 ID=EMLSAP00000009366|Name=EMLSAP00000009366|organism=Lepeophtheirus salmonis|type=polypeptide|length=316bp
MTSKDYYQVLGVPRGSSDEELKKAYRRLAMKFHPDKNKSPGAEERFKEIG
EAYEVLSNPEKRRIYDQYGEDGXKSNSGYQGVDPRDIFAQFFGTHDPFSN
IIGSGVYGASVEDMDIDISGLFGGHGRPPKKEPTIQRPIPISLEDIASGT
QKKMKISRRVVSQDGSYRMENKVVTINVKPGWKAGTKITFAGEGDKYPGK
IPADITFIIKDAPHPVFTRDGQDIFYKCKLSLRDALCGSVIQVPTLSGQK
IGLNLLNTIIKPGHTQRCSGXGLPDIKDHTKKGDLVVQFDIVFPDRLEKD
SXDILYDVLNKYTQQV
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mRNA from alignment at LSalAtl2s599:317728..318678-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009366-705213 ID=EMLSAT00000009366-705213|Name=EMLSAT00000009366|organism=Lepeophtheirus salmonis|type=mRNA|length=951bp|location=Sequence derived from alignment at LSalAtl2s599:317728..318678- (Lepeophtheirus salmonis)
ATGACAAGTAAGGACTACTATCAAGTACTGGGAGTCCCTCGCGGCTCAAG
TGATGAGGAGTTAAAAAAAGCGTATCGTCGATTGGCGATGAAGTTCCATC
CGGACAAGAACAAGTCTCCAGGCGCAGAGGAGCGATTTAAGGAAATAGGA
GAGGCCTACGAAGTCCTCTCCAACCCCGAGAAACGGCGTATCTATGATCA
GTATGGAGAGGATGGAGMAAAATCCAATAGTGGATATCAAGGAGTCGATC
CTCGTGACATTTTCGCCCAATTCTTCGGAACTCACGATCCGTTCAGTAAT
ATTATTGGCTCTGGCGTCTATGGGGCCTCTGTGGAAGATATGGATATCGA
CATTTCTGGACTTTTCGGAGGMCATGGACGTCCTCCGAAAAAGGAGCCTA
CGATCCAGAGACCCATTCCTATTTCACTCGAAGACATTGCCTCTGGAACA
CAGAAAAAGATGAAAATATCTCGCCGTGTCGTCTCACAGGACGGATCCTA
TCGCATGGAGAACAAAGTCGTCACAATCAACGTAAAACCTGGTTGGAAAG
CCGGAACGAAAATCACATTTGCAGGGGAAGGGGACAAATACCCAGGGAAG
ATCCCAGCAGACATTACTTTTATTATCAAAGATGCCCCTCACCCCGTTTT
CACAAGAGACGGTCAAGATATCTTTTATAAATGTAAATTATCWCTCCGAG
ACGCACTGTGTGGATCTGTCATTCAAGTTCCAACTCTGTCAGGACAAAAA
ATAGGACTTAATTTGTTGAATACCATAATTAAACCTGGACATACTCAGAG
GTGTAGTGGCTAKGGACTTCCTGATATCAAAGATCATACCAAAAAAGGAG
ATTTAGTTGTGCAATTTGATATCGTCTTTCCAGATAGATTAGAAAAGGAT
TCCWGGGACATACTCTACGATGTCCTAAACAAATACACACAACAAGTTTA
G
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