EMLSAT00000009388, EMLSAT00000009388-705235 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009388
Unique NameEMLSAT00000009388-705235
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5supercontigLSalAtl2s5:1273082..1274294 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009388 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009388EMLSAG00000009388-692154Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041734EMLSAE00000041734-750662Lepeophtheirus salmonisexon
EMLSAE00000041735EMLSAE00000041735-750663Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780586auto780586Lepeophtheirus salmonispolypeptide
EMLSAP00000009388EMLSAP00000009388Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009388

>EMLSAP00000009388 ID=EMLSAP00000009388|Name=EMLSAP00000009388|organism=Lepeophtheirus salmonis|type=polypeptide|length=79bp
MNHRVICLLYLFPFLADGTLTQTRIKLNPLTGGYENISVIVSSELPPEKC
PQILDKIKIREIKSMCKCIELICCNHLIT
back to top

mRNA from alignment at LSalAtl2s5:1273082..1274294-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009388-705235 ID=EMLSAT00000009388-705235|Name=EMLSAT00000009388|organism=Lepeophtheirus salmonis|type=mRNA|length=1213bp|location=Sequence derived from alignment at LSalAtl2s5:1273082..1274294- (Lepeophtheirus salmonis)
ATGAATCATAGAGTTATTTGTCTGTTATATCTATTCCCTTTCCTTGCGGA
TGGAACCCTTACACAAACACGTATCAAGCTAAATCCTCTTACGGGAGGTT
ATGAAAATATATCCGTCATTGTCTCTTCCGAACTTCCTCCAGAAAAGTGT
CCACAAATTCTAGATAAAATTAAGGTAAGTGATTTTTATTTATATCATTA
TGTTTTTCGTGTTGTGAAGTTTAAAAAAAAACTTTATTAAAACCTTCATG
AAAAAAATAAATTTTTGAATTTGGCGCCAAAGAATTTCTGAGATTTGATT
GGTGTGGGTAAAGGGGTGAATGGGTGAATGAAATGAAGACAGGAACGGAA
AAGAGGGAGGAGCTGGAATTGAAGGAAACTGCAGTGAATGAATGGACTGG
GATTACTCCTCATTGTTATGAGTAAATCATTCATCCTTTGAATCAGGGTT
ACAATCTGGCTGAGCTGAGTAAGTCTGTATTTCTTTTGGGTTTAGTGACA
CTCTTTTGATGTTCCAACAAATAGGACTCTTGGTCAGATAGTATCTGTTT
TAGTAATATCTATGAATAAAACAAATGTGCCCTCTCAACACTAAAACTAG
TTTGAATGATTTTTTTTTAAATTGAGTGAATCCTTTCTTTGCGCCGCAAA
TTGCACTTGATGTAGCCAAAATTGATTGTCACAATAAAGGTATGAGATAT
TGGGACCGATATACGCCTCCGAAATAAAATAATGCCTCTAAACATTAGCT
GAAATTATTGTTTATTTTAACTCATAACACAAATTTGAGTACAAAGCCTA
TAATTAACTCAAATTTGTTCAAGAAATATTGGGTTGTATGCATATATGAA
GTAAAACAATGAATTGGTTTAAGATTGTTTTTATTTTGAGGTACCACATA
TCTACCGGATGTTTTGTTAAACGATAAAAAAAGGTTCCTGACAAAATGTA
AGAAAAAGGGCATCAAGTGGTGGTTTGTTATTGTTTTATTACGTGAGCAA
CTTTCATCAAAGATTTAGATACAATTCTTATTTGCATCAACTTACAAGAC
ATTAAATATCGAGGGATGTCTTAAGGTACAAAAAAACAAAATCAGGGTTT
TCATTGCAGAAATATGAAACATTAACCAATAAAACTTTTTTTTGAAGATA
CGGGAAATAAAATCTATGTGCAAATGCATCGAATTGATTTGTTGTAATCA
TCTTATTACATAG
back to top
Add to Basket