EMLSAT00000009407, EMLSAT00000009407-705254 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009407
Unique NameEMLSAT00000009407-705254
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5supercontigLSalAtl2s5:303399..304469 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009407 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009407EMLSAG00000009407-692173Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041807EMLSAE00000041807-750735Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776123auto776123Lepeophtheirus salmonispolypeptide
EMLSAP00000009407EMLSAP00000009407Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009407

>EMLSAP00000009407 ID=EMLSAP00000009407|Name=EMLSAP00000009407|organism=Lepeophtheirus salmonis|type=polypeptide|length=356bp
MTSSSTSSIYPFSRSSSYPSSLNNHLSYPHRYFSFSQNSLLFRLEDFELR
ETIGTGTFARVCLVKHKFTHAYYALKILSIKDVVRLKQVEHVKNETNILS
ELRHPYIVNLVWKYKDPKFLYMVFPYISGGELFSYLRTAGRFNVPTSLFY
ISEIVCALEYLHSQSIVYRDLKPENLLLDRDGHLKITDFGFAKRISDRTW
TLCGTPEYLAPEIIQSKGHNRAVDWWSLGILIYEMLAGYPPFFDDNPFGI
YEKILGGKIDWPRQMEPVTKDLIKKLLVQDRTKRLGNMKNGAEDVKKHRW
FKSLDWDDVLNKKYKPPIIPNVRHEGDTKNYDYYPETDLTKAIPASERDI
KLLEDF
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mRNA from alignment at LSalAtl2s5:303399..304469-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009407-705254 ID=EMLSAT00000009407-705254|Name=EMLSAT00000009407|organism=Lepeophtheirus salmonis|type=mRNA|length=1071bp|location=Sequence derived from alignment at LSalAtl2s5:303399..304469- (Lepeophtheirus salmonis)
ATGACGTCTTCCTCTACATCTTCTATTTACCCCTTCTCCAGATCCTCTTC
CTATCCTTCATCTCTAAATAACCACTTATCATATCCTCATCGATACTTCT
CATTCAGTCAAAATAGTCTTTTGTTCCGACTAGAAGACTTTGAACTTAGA
GAAACCATTGGAACAGGAACATTTGCTCGTGTTTGCTTAGTGAAGCATAA
ATTTACACATGCGTATTATGCACTCAAAATCTTAAGTATCAAGGATGTTG
TACGATTAAAACAGGTGGAACATGTCAAAAATGAAACAAATATTCTCTCG
GAGCTCCGCCACCCCTACATTGTTAACCTCGTTTGGAAATATAAGGACCC
AAAGTTCCTCTACATGGTTTTCCCCTATATCTCTGGTGGAGAATTATTCT
CTTATCTACGAACTGCAGGACGATTTAACGTTCCCACCTCACTTTTCTAT
ATCTCAGAGATTGTTTGTGCTCTCGAGTACCTCCATTCGCAAAGCATTGT
GTACCGTGACTTAAAGCCTGAAAACTTACTACTTGATCGTGATGGTCACC
TTAAAATTACAGATTTTGGATTTGCCAAAAGGATATCAGATCGTACATGG
ACTCTCTGTGGCACACCAGAATACCTTGCACCAGAGATCATTCAGAGTAA
GGGTCATAACCGAGCAGTTGATTGGTGGTCCCTAGGAATACTCATATATG
AAATGCTGGCTGGCTATCCACCCTTTTTTGATGATAACCCATTTGGGATA
TATGAGAAAATCCTTGGGGGAAAAATCGACTGGCCAAGGCAAATGGAGCC
GGTTACAAAGGATTTAATAAAGAAATTACTCGTTCAAGATCGTACGAAAC
GTTTAGGAAACATGAAAAATGGTGCTGAGGATGTCAAAAAACATCGTTGG
TTCAAATCTCTGGACTGGGATGATGTTTTGAATAAAAAATATAAGCCTCC
AATTATTCCCAATGTTAGACATGAAGGTGATACTAAGAACTATGATTACT
ATCCTGAAACGGATTTAACAAAAGCCATACCTGCATCAGAGAGAGACATT
AAGTTACTAGAAGATTTTTAA
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