EMLSAT00000009417, EMLSAT00000009417-705264 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009417
Unique NameEMLSAT00000009417-705264
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s600supercontigLSalAtl2s600:255333..256953 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009417 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009417EMLSAG00000009417-692183Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041835EMLSAE00000041835-750763Lepeophtheirus salmonisexon
EMLSAE00000041836EMLSAE00000041836-750764Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775383auto775383Lepeophtheirus salmonispolypeptide
EMLSAP00000009417EMLSAP00000009417Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009417

>EMLSAP00000009417 ID=EMLSAP00000009417|Name=EMLSAP00000009417|organism=Lepeophtheirus salmonis|type=polypeptide|length=398bp
MSDLSGIKLDTNTDKDIFQKDVSEVFSTKYVLDKHVSVGLDSTYVLLLDF
NSSKDTIAGALSNGKVSLYTSDLIKKESFKVHEDSITGLQFSPTEPNLFY
TSSMDMEVKLWDLRTGGSQGQVKRFYDSSAKHPGWCHKPLTSFSVNASDR
FLTAGTEQVRGESYLLFWDSRSEELLGGYWNTHIDDITTLKYHISDPNKL
ASGSVDGVVNVYDISQPTEDEALSEAINTESSVQKIKWYNKESEDSXAII
THTEDIYLWRVSDSYPAQIFKRDQITSLGLRRSSVESAYVVDVHPSLDKS
LFFICGSRCPNNSCLRVSYPKKSKLKPYSDLKSSKILNELVSCSIMNENT
GDIVTGNESGLIIKWSPAGKGENDHCDNXVVSGKKSRSSKSXRKXKPY
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mRNA from alignment at LSalAtl2s600:255333..256953+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009417-705264 ID=EMLSAT00000009417-705264|Name=EMLSAT00000009417|organism=Lepeophtheirus salmonis|type=mRNA|length=1621bp|location=Sequence derived from alignment at LSalAtl2s600:255333..256953+ (Lepeophtheirus salmonis)
GTTTTCTTGGACGAAGTTTATTCATTCTTCTTTATGACGTCATCCTAATA TTATCATTTTTTAATGTAAACACGACGTTTCCATGTGTAGTTAATTACAA TTTACAACTTGAACTTAAATTTAATTAGTATTACAAGTCAATTGGCAATT ACTCAAGGCGGGGAGTTTGAGTTTTTACTGCATAATAAGTGACTGTTATT AATTATTACTTAAATATATTATTAACGAAGCCCTCGATAGGTGTTGAGTA CATCGATATTTATTTTATATAATTATATACGGCATATGCCGTATTGAATT TTATTAGATTGTAAAGGCCCTATTAAATCACTCATTCTCGCAATCGGGAT GTCAGACTTAAGCGGAATCAAGTTGGACACGAACACCGACAAAGATATTT TTCAAAAAGATGTTTCTGAGGTTTTTTCTACTAAATATGTCCTGGACAAA CACGTCTCTGTCGGTCTTGATAGCACATATGTCCTTTTATTAGATTTTAA TTCCTCAAAAGTGAGTGGTTAAATTCATCTTTCAGATGTATCCAACATCA GATAGAAATCATCCTTGCATTATGTTTACTTTACAGGACACAATTGCTGG AGCTCTCAGCAACGGAAAAGTGAGTCTCTATACCTCTGACTTGATAAAAA AAGAGTCATTTAAAGTCCATGAGGACTCCATCACAGGCCTTCAATTTAGT CCCACAGAGCCCAACTTATTTTACACAAGCTCCATGGACATGGAAGTAAA GCTTTGGGATTTGAGAACAGGAGGATCTCAAGGCCAAGTCAAAAGGTTTT ACGATTCTTCTGCTAAACATCCGGGATGGTGTCATAAGCCATTGACGTCT TTTTCTGTAAATGCCTCTGATAGATTCCTAACAGCAGGGACTGAGCAAGT GAGAGGAGAGTCTTATTTACTCTTTTGGGATAGTCGCTCCGAAGAACTTC TCGGTGGTTATTGGAACACTCATATTGACGATATAACAACATTAAAGTAT CACATATCCGATCCGAATAAACTTGCATCCGGTTCAGTTGATGGAGTGGT CAACGTCTATGATATAAGTCAACCTACAGAGGATGAGGCACTTAGTGAAG CAATCAACACTGAGTCATCTGTCCAAAAAATCAAATGGTACAATAAAGAA TCAGAGGATAGTRTAGCCATTATAACTCATACGGAAGATATATATCTTTG GCGAGTATCTGACTCGTATCCAGCACAAATTTTTAAACGTGATCAAATTA CTAGTTTAGGACTAAGAAGGAGCTCGGTTGAATCGGCTTACGTTGTTGAT GTGCATCCTAGTCTTGATAAGTCCTTGTTTTTTATATGTGGAAGTAGATG TCCAAATAACTCTTGTCTTCGAGTATCGTATCCAAAAAAATCAAAACTAA AGCCTTATTCAGATCTCAAATCCTCTAAAATTCTAAATGAGTTGGTTAGT TGTAGTATAATGAACGAGAATACGGGAGATATTGTTACTGGGAATGAGAG TGGATTAATAATTAAGTGGAGTCCTGCTGGTAAAGGAGAAAATGATCATT GCGATAATGWTGTCGTCTCTGGTAAAAAGTCTCGCTCTTCAAAGTCTKCT CGTAAATTKAAGCCGTACTAA
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