EMLSAT00000009451, EMLSAT00000009451-705298 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009451
Unique NameEMLSAT00000009451-705298
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s607supercontigLSalAtl2s607:176320..181083 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009451 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009451EMLSAG00000009451-692217Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041969EMLSAE00000041969-750897Lepeophtheirus salmonisexon
EMLSAE00000041970EMLSAE00000041970-750898Lepeophtheirus salmonisexon
EMLSAE00000041971EMLSAE00000041971-750899Lepeophtheirus salmonisexon
EMLSAE00000041972EMLSAE00000041972-750900Lepeophtheirus salmonisexon
EMLSAE00000041973EMLSAE00000041973-750901Lepeophtheirus salmonisexon
EMLSAE00000041974EMLSAE00000041974-750902Lepeophtheirus salmonisexon
EMLSAE00000041975EMLSAE00000041975-750903Lepeophtheirus salmonisexon
EMLSAE00000041976EMLSAE00000041976-750904Lepeophtheirus salmonisexon
EMLSAE00000041977EMLSAE00000041977-750905Lepeophtheirus salmonisexon
EMLSAE00000041978EMLSAE00000041978-750906Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773946auto773946Lepeophtheirus salmonispolypeptide
EMLSAP00000009451EMLSAP00000009451Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009451

>EMLSAP00000009451 ID=EMLSAP00000009451|Name=EMLSAP00000009451|organism=Lepeophtheirus salmonis|type=polypeptide|length=593bp
MIAYKESDALLSWNVPHPLTQKLPEKVCDFIKEGNDSQIIHRDDDEEDFV
LLSRSKRHNEYMSLRQTRCPLLLVADYRFYKEMGGSSSKTTVNYLISLID
RVHKIYEDTIWKDTSGSSGFSGMGFIIKKILVHRKPTLVQDGQVHYNMEK
SSWDVRNLLEVFSRDDSHKHFCLAHLFTDIKFEGGILGLAYVGSPRRNSV
GGICTPEYFKNSHTLYLNSGLSSSRNHYGQRVITREADLVTAHEFGHNWG
SEHDPDSSECSPSASQGGSYLMYTYSVSGYDINNKKFSPCSLRFIRKVLL
AKSSRCFSEPEESFCGNLRVEGDEECDAGLLGSEDTDACCDENCKLRPMA
KCSDKNSPCCESCNFVLRGAKCRAANLGTCEQESHCTGDKASCPTSRAMR
DGTQCLEKGECRKGECVPYCEIQGKQSCMCDTEKNACKRCCRERTNSSCY
PALDQRGMEDQLPDGTPCYQGFCNKGICERTMQDVVERIWDFIEDFNINS
VLKFLKDNVVGVVVFISLLFWIPCSCLISYVDRKRAEKDEEEWKWMTHNQ
LIHPRDNRRIVEISVPRSHTPCNGRRDLNRDHYHPSRNRLSAL
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mRNA from alignment at LSalAtl2s607:176320..181083+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009451-705298 ID=EMLSAT00000009451-705298|Name=EMLSAT00000009451|organism=Lepeophtheirus salmonis|type=mRNA|length=4764bp|location=Sequence derived from alignment at LSalAtl2s607:176320..181083+ (Lepeophtheirus salmonis)
TAAAGTGCATAATATTTGTACATTAGAGAAGGACTCCCTACGGATATCCA
AATAGGATCACTCATCAGAGATATTCATTAGTGTAATCGACTGTTCTATC
GCTCTTGTTCTTCCATTTTAATTGATATATATCCCACACCTCTAAAGTAA
TTGAAAATCCTCAAAGATAACTACTCAGTTTTGAAATAAATAAATTTTGA
CTCCTCCAAATTCCATCTCACTATACTAAAGTATAAAGAAGCTCTCAGCA
TGTATGATTTCGTATTGTTCAGATATATGGCTACAAATAATATACTCATT
AATATAATAAAAATCTACATATATTCCATTCTAAACAGGTAACTATATCA
TAAAAATAGAATTACGTTCCAGATTGAGATAAGAGCAATAGAATTATATC
TAGCTAGTCATTTGAAACATTTACAAAAACTTAATTGATAACATAAAATC
GTTCCTTTCCCTAAGTGAGGCTTTAGCTGACGCAGATGTTTACAAAGCAG
TTGTATAGTGCGTATTATTGAGGCAATAATAGCTACATTTGATTATTTTG
TGGGCGCGAAAAAGAAGAGAAGCATTCTGAAGCGGATTACTAAGCTTGAA
TCATGATTCATGAATATGATATGATATATTATTTGAAAATTTTATAAAAT
GAGAACTGAATGCTGAGCAGTTCAAACGTTTTTACTTGATCATGAGCTGA
TGTGAAGTATAAATTGTGCAGCATTCATGTATATTTCTAGTAAATATTCT
AGTTTGTCTAGGCGAACTTGTTCAGATTTCTTTGTTATTTACAATATGTA
CGCGTCTTTACACGATTCTCAATCCATTAGATTTCAAATATCGAATGAAT
TTACATCCTAGATCTTGTTTATAATTTATAGGAGAACAGAACAAAAGTTA
TTGTCTTGTAGCTTTGACGTTTGTACTGAGACATCATATATAAATGGACA
CTCCCTTACATAATCACGTATCAACACTACATTATTAGAATAGATTTGAA
TGTCGTACTCGAAATATTGTACTTATATTTCAGTGCACTATTCAATATAT
GACCACTTTTGTCATGTACAGAATGCTAGAAACAAATCATTATAATAAAT
TTACTCGAAAATGAAAACGAAATCTTCAAATCTTTATTATTAATTACTTT
ATAAGACTAGAGCGCATCTACGCTTCAAATAAATAAGGCACAATTTATTT
TCTCATCAAAAGTCATCAATGAGGAAATTTAAGAGTTATTTAATCATTTT
AAATATGATTTAGTTCAATTTTTTAGGGTTTTTGTTTCTTCTTTAAATTA
CATTACTTCAATTAGTTAAAGGATTTTTTTTAGCGAGGTTGTGAGACGAT
CAAATATTACTAGCCAACATCTACTTCTTTGTACGTATGTATTAACAGTT
TTTATTCTTGCTACTTCAAATCTTCCCTCTATTATAAAAATAGGAAAGCA
TTGATTGTTCGTTGAGCTGAGAGGAGGGGGCATCGTCAACCATGTCGAAC
GAGGAAGTGTCATCTTTCTCTAATTCGATGGTAGGTAATGGTTAGAGGAC
AAAACAAGTCCTATTAGCAATTATGGGTATTATTTTCCACCCTAGTGTAA
TCTTTAGTTCTTTCATTGATTATAATTAAATACTACTATTATGATATTAT
CTATTTCTATTAGTGAAAAGTTTTTAACAAGATAACATGGGAATTGATAA
TGATTTGGCTCAAACTTTTGGTGCTAATTTGTTTACAAGGATGGAGTCTG
TCCGACATTACAAAAAATCTTCGTCATTTCGAAATTTTGAGTGCTTCAGA
TCTTTCTCATAGCATCGTAAAAAGAGGCCTTGCAGATTCGAACCATCAAT
ACAATAAGATCAAAGAAGTAGGATTCAAGGCATTGGGTAATGGTTTAACA
AAATTAATCGTTAATATATTTAATTGTATTAGTTAAAGTGTTTTAAATAT
TATGAATCCTTAATATTTTCCTTTTAATTTCATGCAGGTCGAGAATTCCG
ACTCCTTTTATCCCCTAAAACTGGCCTGTTACATAAGAGTTTTAAAGCTG
TCGAGGAAAATGAAGATGGAAGTTTCTCCAATGTCTACATTGACCCAGAA
TCATTTTACCAGGGGCGTGTTTTCGGTGAACTTTCCTCCAATGCAGTTGT
TCATTTTTCGGAGGAGGGAATACTTACTGCTAAAATCCAGACTTCTGAAG
ACACTTATCACGTAGAGCCTGCATGGAGATTTTTTGTCAGATTCAGAATA
TGATCTAGGAAGTAAAATGATTGCCTATAAAGAGTCAGATGCTTTATTGA
GTTGGAATGTTCCCCATCCTCTCACTCAAAAACTGCCAGAAAAAGTATGT
GATTTTATAAAGGAAGGGAATGATTCCCAAATAATCCATAGGGATGATGA
TGAAGAAGATTTTGTTCTTCTGTCGAGATCTAAGAGGCATAATGAATACA
TGAGCTTGCGTCAAACTAGATGCCCCTTGCTTCTAGTTGCTGATTACAGA
TTTTATAAAGAAATGGGAGGCTCAAGTTCGAAAACAACTGTAAATTATTT
GATAAGGTATGCAATAGTCTTTATAGAGACAAGAAACACGTAGTATAGTA
GGGTTTTAATGTTTTAAATAAATCATTTCAGCCTTATCGATCGTGTTCAT
AAAATCTATGAAGACACCATTTGGAAGGATACAAGTGGAAGCTCTGGATT
TTCAGGAATGGGATTTATAATAAAAAAGATACTAGTACATCGGAAGCCTA
CGCTTGTTCAAGATGGGCAAGTGCATTACAATATGGAGAAGTCATCATGG
GATGTTCGAAACCTCTTGGAAGTATTTAGTAGAGATGACTCTCACAAACA
TTTTTGCCTTGCTCATCTCTTTACGGATATTAAATTTGAGGGTGGGATCT
TAGGCTTAGCTTATGTGGGATCTCCTAGGCGGAATTCTGTGGGTGGCATA
TGTACACCTGAATATTTCAAAAATAGTCATACATTGTACCTGAATTCTGG
ACTTAGTTCAAGTCGCAATCATTATGGTCAAAGAGTTATTACTCGGGAAG
CTGATCTAGTGACTGCTCACGAATTTGGTCATAACTGGGGATCGGAACAT
GACCCTGATTCATCAGAATGTTCTCCTTCAGCCAGTCAGGGAGGATCATA
TCTGATGTACACCTATTCTGTTTCTGGCTATGATATAAATAATAAGAAGT
TCTCACCATGTAGCCTACGATTCATTAGAAAGGTATGTATACATATATTG
AGTGTCCTCGAATTTTAATTACATACCATCCTTTGTTAGGTTTTATTAGC
TAAGTCAAGTCGATGTTTTTCTGAGCCTGAAGAATCATTTTGTGGTAATC
TTCGTGTTGAAGGAGATGAAGAGTGTGATGCAGGTCTACTAGGATCAGAA
GATACAGATGCTTGTTGTGATGAAAACTGTAAACTTCGTCCTATGGCTAA
ATGTTCGGATAAAAACTCCCCTTGTTGTGAAAGTAATACCAATGATTTTA
TCACAATTGAAATAAAAGTATATTACACTTTTTTTAATTAGGTTGCAATT
TTGTTTTGAGGGGAGCCAAATGTAGAGCTGCTAATTTGGGAACATGTGAA
CAAGAGTCTCATTGTACTGGAGATAAAGCATCATGTCCAACTAGTCGTGC
AATGAGAGACGGAACCCAATGTTTAGAAAAAGGAGAATGCCGAAAAGGTG
AATGTGTACCCTATTGTGAAATTCAAGGCAAGCAATCATGTATGTGTGAC
ACCGAAAAAAATGCTTGCAAAAGGTAAAATATATAATTGTTTTGTAATAT
TTACTCTTAAGAGCATCAAGTAGTAAAGAATCAATTCTATTGAGCCTTAT
TGGTGTATTAATTTTTTGGTAGATTGTAAATCTAGATTATTTTTAGATGC
TGCAGGGAAAGAACAAATAGTTCATGCTATCCGGCCCTGGATCAACGTGG
AATGGAGGATCAGTTGCCTGATGGAACACCTTGTTATCAAGGCTTTTGCA
ATAAAGTAATAGTTTTCTATGCATCTACTTTTGGTAATTTATCATAATGA
ATGTCTTTGTTCTTAGGGGATTTGTGAAAGAACCATGCAAGATGTTGTTG
AAAGAATATGGGACTTCATAGAAGATTTTAATATTAATTCTGTGTTAAAG
TTTCTGAAAGATAACGTTGTGGGAGTAGTAGTTTTTATTTCATTATTGTT
TTGGATTCCATGTTCGTGCTTGATTTCCTATGTTGATCGTAAACGAGCCG
AGAAGGATGAAGAGGAATGGAAATGGATGACACATAATCAACTGATTCAT
CCGAGGGATAATCGACGAATTGTTGAAATATCTGTTCCTCGGAGTCATAC
TCCATGTAATGGAAGGAGAGATTTAAATCGAGATCATTACCACCCATCCA
GAAATCGTCTTTCAGCCTTATGATATTTCAAGTTTAGTTTGACATTGGTT
AATTTTGTAAGTATCCGTTAGTCCTAATATACCAATTATAAAAAAGGTAA
GAGTACCTTTTTTCCCCCACAATCACTCCCTTCATGCTGTTAAATATTCA
CCAACTGCCATATCAATGCTCAAAATCAACATGGGTTGTGATGATGCTGT
ACAAGATTATTTATATTTAGGATTTATTATTGTATCACTTTTTATATGTA
CTCGATGAATTAAATTACACTCACAAAATTTTAATATTATTTTTGTATTT
ATTCAGTGCGATTAATCTGTTCTATAATTTATGTTCTCTGAATGTACTTT
AACACCCACTTTTA
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