EMLSAT00000009478, EMLSAT00000009478-705325 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009478
Unique NameEMLSAT00000009478-705325
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s611supercontigLSalAtl2s611:106938..108814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009478 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009478EMLSAG00000009478-692244Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000042088EMLSAE00000042088-751016Lepeophtheirus salmonisexon
EMLSAE00000042089EMLSAE00000042089-751017Lepeophtheirus salmonisexon
EMLSAE00000042090EMLSAE00000042090-751018Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772322auto772322Lepeophtheirus salmonispolypeptide
EMLSAP00000009478EMLSAP00000009478Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009478

>EMLSAP00000009478 ID=EMLSAP00000009478|Name=EMLSAP00000009478|organism=Lepeophtheirus salmonis|type=polypeptide|length=316bp
MYSYMTHGESYRSYPCSALFDISKCFYHVLKGFLLFFLNYVMPPKPKSLF
GEVALITGAGGGLGRELSLQLTDLGVKVICVDINKVSVEETCRITQKKGS
LGSRAFVCDISVPKEVGDLVKKISLLEDELGPITMLFNNAGIAHCKPFLK
HTNEEIQSLFQVNVISHMYLIKEYLPKFLDANKGHLVSIGSIAGSIGTAN
LVPYCSTKYAIRGLTESLFMELREMYPNTSVKMTTAHPYTISTSLIPKPK
NRFNSLFPIMNACDVASNVIGAVRRDEEVISMPPFASLASSFYKCFPRQV
QLAILDLLECGVYESG
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mRNA from alignment at LSalAtl2s611:106938..108814+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009478-705325 ID=EMLSAT00000009478-705325|Name=EMLSAT00000009478|organism=Lepeophtheirus salmonis|type=mRNA|length=1877bp|location=Sequence derived from alignment at LSalAtl2s611:106938..108814+ (Lepeophtheirus salmonis)
AAGAGTCTTAATATTAATTTTAAAATCCCTTTCAAATATAATATATCAAG TTATCATTCTTTTATTTTTACGATCAACTTTGCCAAATTTAAGTACAATT TAATGTGACTCCAATGGGTTAATAAGAATAACTTGTTCATAGAAATGGAC TATAATTTGTCAAAGAATACAAAATGTAGTTTACACTCATTTTTAGCTAG CTTTTGTATTCACGAGGGACATATCTGCATAAGTATGAGGTGGATTATTA TGAAATATATTTAAAAAAAGTTCAATACTTATTTCGACAAATTTGGAAAA ATGGAGTTTAGAAAGATGAATAAAATTATTTAAGGATCAATATTAATAAT ATGTTACATAACAGTTTATCATCTGTATAGATATTGATGGTTATATTATG TTCTATGAGCCTATAGTCGGTTTGAATGTGGTTTTTTAAAATGGAGAAAT TTTTACGCGTACGTCGCATAGCTCGTACCTATGCAGGCTACACTAGAAAT CCTAAAAATAAAATCACATGTACTCATATGTAAGTAGGTTATATTTTTCC TGTGTCTGCCACAACAAGGAACCTTTTGATTAAAGATGACACATGGAGAA TCCTATAGAAGCTATCCTTGCTCAGCTCTATTTGATATCTCGAAGTGCTT TTATCATGTTTTAAAAGGATTCCTTCTGTTTTTCTTAAATTATGTTATGC CTCCAAAGCCCAAGAGTTTATTTGGTGAGGTTGCATTGATTACTGGAGCC GGAGGTGGACTTGGTAGAGAATTGTCTTTACAATTGACGGATTTAGGTGT TAAAGTTATCTGTGTTGATATAAATAAAGTGTCAGTTGAAGAAACGTGTC GAATTACTCAAAAGAAAGGTTCTCTCGGAAGTCGTGCATTTGTTTGTGAT ATTTCAGTTCCAAAAGAAGTTGGTGATCTTGTCAAAAAAATTAGGTAATT TTATTGATGAAGGTTTTTCATAGAGTTTAACATTGCAATATTTTCTTTAC AGCCTACTGGAAGATGAGCTTGGTCCTATTACGATGCTTTTCAATAATGC GGGTATAGCTCATTGTAAACCCTTTTTGAAGCATACCAATGAAGAAATTC AATCATTGTTTCAAGTCAATGTAATATCTCACATGTATCTCATTAAGGAA TATCTGCCCAAGTTTCTTGACGCAAATAAGGGGCACTTAGTATCAATTGG GTCTATTGCTGGATCTATCGGAACAGCGAATTTAGTTCCATATTGTTCAA CCAAGTATGCTATTCGAGGATTAACAGAGTCTTTGTTTATGGAACTTAGA GAAATGTATCCGAATACTTCGGTTAAAATGACAACTGCTCATCCTTACAC CATATCCACAAGTCTTATACCAAAGCCCAAAAATAGATTTAACTCACTGT TTCCCATTATGAATGCATGTGACGTTGCTAGCAACGTTATTGGAGCAGTT AGAAGGGATGAAGAAGTCATATCGATGCCACCTTTCGCTTCATTGGCCTC GTCGTTTTATAAATGTTTTCCTAGACAGGTTCAATTAGCTATATTAGACT TATTAGAATGTGGAGTATATGAATCAGGTTGAAATATTCATAGGTTACAT GATAATAATATGATTCAGTGTTATCAAAACAATTAATTATATAAATAAAT AAAAAAGAGATCGTTTATTTATTTTAAATTTCATTTGGTATTTAATTAAA GTGTATTTTCAACATAAATAGATGGATTCAATAAATTATTAAATGTATAT ATATTCGGGAATACAGAGTAATAAACTTTAGACTGTAAATATATTTCTTA ACATGAGTATTTGGGATAATAAACAAATTTTGTAAAGAAATTAATTGAAT GACCAAATTTAAAATAATAAAACAGGA
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