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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s612 | supercontig | LSalAtl2s612:171960..178221 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000009512 >EMLSAP00000009512 ID=EMLSAP00000009512|Name=EMLSAP00000009512|organism=Lepeophtheirus salmonis|type=polypeptide|length=1923bp
MCSDIWRNSLLLVWILFLCSPCNLKAQDVVARFQDEGSGLEGSEGPAFNH
LVVDKVTGRVYVGAXNRLYQLNPDLSRPVTVVTGPQEDTPQCSVLPKCAF
ATRLTDNVNKALVIDYAESRLVSCGSLFQGACSVRSLRNISHVEREVPES
VVANNATASTVAFIAPGPPDPPISRVLYVGVSFTVNGPFRTDLPAIASRS
LDGDKLFQIAETAVTTGTRMLVNSLARQTYPINYIYGFSSEGFSYFLTTQ
MKRTGASPFHSRLVRVCHDDPDYYSYTEIPIECISSDPSKNYNLAQAAYV
GKPGSDLASNLGITAQDDVLFAVFSESDSSEGEISSKPSKNSALCVYALK
SVRRKFMQNIQRCFSGTGFRGLDFISTSLKCINTRLSQIREDFCGLDVNT
PLGGELPVIAEPVLTFDNSLLTAVTATSTGDFTVAFIGTGDGYLKKVVVS
SANSGLEYSSIQISEESKVNSDIVFDLKRDHIYVMTEKQVSKVRVQDCSV
YTTCGECLGAKDPYCGWCSLENKCSLRGDCRDAAMDPLYWISYKSGRCTT
ITQVQPNELQRTTARTLTLSIDNLPSLSGQFLCVFAALGKTLITNATLTS
NGVTCTTPRNDLLPLIPANEHHFTSVLSVRMSEGPDFVSTNFTFFDCNTF
DTCSSCVSSNFPCDWCVDAHRCTHDTAEYCRNDILVTGVKRVGPSIRSGP
GFCPLINVTNDDGSSEILVSAGISKAIRVKIYNIANFISNTRFVCQFNIE
GRVTSVNAQMLGDIIYCDDMEFSYTSRAPNITASFAVIWGGSKPLDNPDN
IHVLIYRCKEMAENCGMCLSLDEKFECGWXQSSGKCEVKDKCGKDATSWL
DREKTCPNPMVLDFHPTTGPWEGGTNITIHGINLGKQFNDIYGGITVAGI
QCDPYEHLYQRTEKIVCKVDGPGTRKKRNGPVIVKVADFRGESSKDYEFI
DPRLTAIRPRRGPQSGGTRIKIIGKYMNAGSHIEAFIGDSPCEIVETRPD
KAICITSASKSLSKEPVKMIFDKGTRELENRKYEYVEDPIVDSAYSGSLG
GGVQKVPKGIVSGGINVTVEGQNFNYIQEPIFYVHYQGMRYKSNPCNVVD
NKKMFCLSPRVDSLVSKPWRNIDQPEPIDLNFGFVMDNVARVQNLSNVLN
SYLLLYPDPEFNKFDEEDGIKYYKSDYLTLNGKNLNRASKESDMKVRIGK
KFCNVTSLSLYQLTCKPXXXXXXXXXXXXXXXXXXXXXXXSYSSGNDAHL
PKPVLAGVILGACILLLIVIAILILYRRKSSESTRVLKNMQEQMDVLELR
VAAECKEAFTELQTEITELGTELQQGGIPFLNYRTYCVRILFPSVQDHPV
LQWDRPELQRKEKGLRMFGQLIMNKTFLVLFIRTLESNRYFSMRDRVNVA
SLIMVTLQSRMEYCTDILKTLLSDLIEKCIEGKSHPKLLLRRTESVAEKM
LSSWFTFLLYKFLHECAGDPLYMLYCAIKHQVDKGPLDMITHEARYSLSE
EKLIRQQIDYNQMTVYVSMSPQTIYMSGLDPQGESMDISVRVLNCDCISQ
VKDKALDTIYRAFPYSQRPKREDLDLEWRTGTSGRLILYDEDSTTKTEGD
WKRINTLNHYRVPEGALLTLVPKQSSMYNISTMSDKSDRHLYHKYETLNL
AKSGAGNGTSPPISRATSPLNPDYDSNGLKMWHLVRHDWGDDKDGDNRHN
KMVSEIYLTRLLSTKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFL
DDQALAHGINDIDVVHTWKSNSLPLRFWVNLIKNPDFVFDIGKSNIVDSC
LSVTAQTFMDXCSTSDHVLGKDSPSSKLLYAKDIPVYKDWVDRYYSDIKA
MPVISDQDMNAMLAEESRLHANEFNLNSALHELYSYAVKYNEQLILTLDE
DKFACKQRLVYKLEQVHNVMQGD back to topmRNA from alignment at LSalAtl2s612:171960..178221+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000009512-705359 ID=EMLSAT00000009512-705359|Name=EMLSAT00000009512|organism=Lepeophtheirus salmonis|type=mRNA|length=6262bp|location=Sequence derived from alignment at LSalAtl2s612:171960..178221+ (Lepeophtheirus salmonis)
AAAAGAGGGGGTTCCATATTCGTTTGAGTGTTCCCTGGAGTGAGACTCCA
ATTATAAAAAAAAGTAAATCAAGCTGAGAGAAAGAAGGAAGGAAAGAAAG
AAAGAAAGAAAGAAAAGAAAAGAAGAAGAAGAGGAAGAAAAGAAAAAAAA
GACTCGAGGAATTCTGAACGGAATTGCCATTGGAGTAACTAAGAAGGTGG
AGAAGTGGAGTCTAAAGGGAGAAATATAAAATATCAAGGCTGGAACAGAA
AGAGAAAGAATGTGAAGGATCCAGACGATGGATCCAAGGCGKTTGTGATT
GTTTAGAAGAAGAAAGTGAGCCTTGTGATCCTATGAGGGTCTGACTCTGC
GAGGGAGGCCACTGGGAACTGGGAAGTGGGAAGGGACTGGAAATGTGCAG
TGATATTTGGAGGAACTCTTTGCTCCTGGTTTGGATTTTGTTCCTGTGTA
GCCCTTGTAACTTGAAGGCCCAGGATGTAGTGGCTCGTTTCCAGGACGAA
GGGAGTGGATTGGAGGGGAGTGAAGGTCCTGCCTTCAACCATTTAGTGGT
GGACAAAGTAACGGGTCGTGTGTACGTAGGAGCCGKGAATCGGCTCTATC
AGCTGAATCCGGATCTCTCCCGTCCTGTGACAGTTGTTACGGGCCCTCAA
GAGGATACCCCTCAATGCTCCGTCCTCCCTAAATGCGCCTTTGCAACTCG
GCTCACAGACAATGTTAACAAGGCCTTGGTGATTGACTACGCTGAATCCC
GCCTCGTGTCCTGTGGCTCCTTATTCCAAGGGGCSTGTAGTGTGAGGAGT
CTGAGAAACATCTCGCATGTGGAAAGAGAAGTACCAGAGTCGGTGGTTGC
CAATAATGCGACTGCGTCCACAGTTGCTTTTATTGCACCAGGACCTCCGG
ATCCCCCTATATCTCGTGTGCTATATGTAGGAGTTTCATTTACTGTGAAT
GGGCCCTTTAGAACAGATTTACCCGCTATCGCAAGTAGAAGTCTTGATGG
AGACAAACTCTTTCAAATTGCGGAAACAGCCGTGACAACGGGAACCCGCA
TGCTTGTCAACTCCTTAGCTAGACAAACTTATCCCATCAATTATATCTAT
GGATTTAGTTCTGAAGGGTTTTCCTACTTCCTTACTACTCAAATGAAACG
CACTGGAGCTTCACCATTTCATTCTCGATTGGTTAGAGTTTGTCACGACG
ATCCAGATTATTATTCTTATACAGAAATTCCAATTGAGTGTATTAGCTCA
GATCCATCAAAAAATTATAACCTTGCACAGGCCGCTTATGTAGGGAAACC
AGGATCTGATCTCGCATCTAATTTAGGTATTACAGCTCAAGATGACGTTC
TTTTTGCTGTGTTTTCTGAAAGTGACTCATCGGAAGGAGAAATCTCTTCT
AAGCCTTCAAAAAACTCTGCTCTATGCGTTTATGCTTTGAAATCTGTTCG
AAGAAAATTTATGCAAAATATTCAACGTTGTTTTAGTGGAACAGGATTCA
GAGGACTTGATTTCATTTCTACGAGCTTAAAGTGTATCAATACTCGATTG
TCACAAATTCGTGAAGACTTCTGTGGTTTAGACGTTAATACTCCTCTCGG
CGGTGAACTACCAGTCATTGCTGAGCCTGTTCTCACCTTTGACAATTCTC
TACTAACTGCTGTAACTGCTACATCTACCGGTGATTTTACTGTTGCATTC
ATTGGCACAGGAGATGGCTACCTTAAGAAAGTGGTCGTTTCTTCTGCAAA
CTCTGGCTTGGAATATTCGAGTATTCAAATCTCAGAAGAATCAAAAGTCA
ACTCTGATATAGTTTTTGACTTAAAACGCGATCATATTTATGTCATGACT
GAAAAACAAGTTTCAAAAGTTCGAGTTCAAGATTGTTCCGTTTATACAAC
TTGTGGAGAGTGTTTGGGAGCAAAAGATCCATACTGTGGGTGGTGTTCAT
TAGAGAACAAGTGTTCTCTAAGAGGAGACTGCAGAGATGCTGCCATGGAT
CCCTTGTATTGGATTTCATACAAAAGTGGTCGCTGTACCACTATAACTCA
AGTTCAACCTAACGAGCTTCAGCGAACAACTGCAAGAACTCTTACTCTAA
GCATAGATAATCTTCCATCTCTCTCGGGTCAATTTCTTTGTGTTTTTGCT
GCCTTGGGAAAAACACTTATCACTAATGCAACACTAACTTCAAACGGGGT
TACATGCACAACTCCCCGTAATGACCTTCTACCTCTTATTCCAGCTAATG
AGCATCATTTTACTTCCGTTCTCTCTGTCAGAATGTCAGAAGGCCCAGAT
TTTGTGTCAACCAATTTCACATTCTTTGACTGTAACACCTTTGATACATG
CAGTTCGTGCGTCTCTTCTAATTTTCCATGTGATTGGTGTGTTGATGCTC
ATCGTTGTACTCACGACACGGCTGAATACTGCCGGAACGATATTCTTGTA
ACAGGAGTAAAGCGTGTTGGTCCATCAATTCGATCGGGGCCGGGTTTTTG
TCCTTTAATAAATGTTACTAATGATGATGGAAGTTCTGAAATTCTTGTCT
CAGCTGGAATTAGTAAAGCTATTCGTGTCAAAATATATAATATAGCCAAT
TTTATAAGTAATACTCGCTTTGTATGCCAATTCAATATTGAAGGAAGAGT
TACTAGTGTCAATGCTCAAATGCTAGGAGATATTATTTACTGTGATGATA
TGGAATTTTCTTATACTTCTCGTGCTCCTAACATTACTGCCTCATTTGCT
GTTATTTGGGGAGGTTCAAAGCCTCTGGACAATCCGGATAACATCCATGT
TTTGATTTATCGTTGCAAAGAAATGGCGGAAAATTGTGGAATGTGTTTGT
CATTGGATGAAAAGTTTGAATGTGGATGGKGTCAGTCCTCTGGGAAGTGT
GAAGTTAAGGACAAGTGTGGAAAGGATGCTACATCTTGGTTGGATCGTGA
AAAAACGTGCCCAAATCCTATGGTAAGTCCCTTGTTTAAGATATATTCAT
GATTCTTTTTTATAAAAAATCAAAAATAATTAGTGGGATTTGATTATGAC
TGTACTTTTTAAACTTTTTACAGGTCTTGGATTTTCATCCGACTACAGGT
CCATGGGAAGGAGGAACTAACATTACAATTCACGGTATAAATCTTGGAAA
ACAATTTAATGATATCTATGGTGGCATTACGGTTGCCGGAATACAGTGTG
ATCCCTATGAACATTTATATCAAAGAACGGAAAAAATTGTATGCAAGGTT
GATGGCCCTGGAACGAGGAAAAAAAGGAATGGACCTGTGATTGTTAAAGT
AGCAGACTTTAGAGGAGAGAGTAGCAAGGACTATGAATTCATAGATCCTA
GATTAACAGCTATTCGACCTCGTAGAGGTCCTCAGTCAGGAGGGACTCGA
ATCAAGATAATAGGAAAATATATGAATGCTGGCTCACATATAGAGGCTTT
CATTGGAGATTCGCCTTGTGAAATAGTAGAGACTCGACCAGACAAGGCCA
TCTGTATCACTTCAGCTTCCAAGTCACTTTCAAAAGAACCTGTGAAAATG
ATATTTGACAAAGGCACACGTGAGTTGGAAAATCGAAAATATGAATATGT
GGAAGATCCTATTGTTGATTCGGCATATTCTGGGTCACTTGGGGGTGGAG
TGCAAAAAGTTCCCAAAGGAATCGTTTCCGGAGGAATAAATGTAACAGTC
GAAGGACAAAACTTCAATTATATTCAAGAGCCTATATTCTACGTGCATTA
TCAAGGAATGCGCTATAAATCAAATCCTTGTAATGTTGTCGATAATAAGA
AAATGTTTTGCCTTAGTCCAAGAGTTGATTCCTTAGTATCAAAACCCTGG
AGAAATATAGATCAACCAGAGCCTATCGATCTTAACTTTGGATTTGTGAT
GGATAATGTAGCTCGAGTGCAGAATCTCTCAAATGTTTTGAATTCTTACC
TTCTTCTTTATCCTGACCCAGAGTTTAATAAGTTTGATGAAGAAGATGGT
ATCAAATATTACAAATCTGACTATTTAACACTAAATGGAAAAAATTTGAA
CCGAGCTTCCAAAGAGTCTGATATGAAAGTACGGATTGGTAAAAAGTTTT
GTAACGTGACATCACTTTCGTTGTATCAACTCACTTGTAAACCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAAGTTATTCAAGTGGAAATGATGCACATTTACCGAAGC
CTGTCTTAGCTGGTGTTATTTTAGGTGCCTGTATACTTTTGCTAATTGTG
ATTGCCATTCTCATTCTGTATCGTCGCAAATCATCTGAAAGTACTCGAGT
TCTAAAGAATATGCAAGAACAAATGGATGTTCTTGAATTGAGGGTGGCTG
CCGAGTGTAAGGAAGCTTTTACTGAATTACAAACAGAGATTACGGAGTTA
GGGACAGAATTGCAACAGGGTGGAATACCTTTCTTGAATTACAGGACATA
CTGCGTTCGCATATTATTTCCATCTGTTCAAGATCACCCAGTTCTGCAAT
GGGATCGCCCTGAGTTGCAAAGAAAAGAAAAGGGCTTGCGAATGTTTGGT
CAACTGATAATGAACAAGACCTTTTTAGTTTTATTCATAAGGACTCTTGA
ATCTAATCGATATTTTTCCATGAGGGATAGAGTTAATGTAGCCTCTTTGA
TCATGGTAACTTTGCAAAGTCGTATGGAATATTGCACTGATATTTTGAAG
ACTCTACTTAGTGACTTGATTGAAAAGTGTATTGAAGGCAAGTCTCATCC
AAAACTATTACTAAGGCGCACTGAGTCGGTTGCTGAAAAGATGCTCTCTT
CCTGGTTCACGTTCCTGTTATACAAATTTCTGCATGAATGCGCGGGAGAT
CCTTTATATATGTTATACTGTGCAATTAAGCATCAGGTAGATAAAGGTCC
TCTTGATATGATTACCCATGAGGCTCGTTACTCCCTTAGTGAAGAAAAAC
TAATTCGTCAACAGATTGATTATAATCAAATGACTGTGTATGTCTCAATG
AGTCCTCAAACAATTTATATGTCCGGATTAGACCCCCAAGGGGAGAGTAT
GGATATATCAGTCAGAGTTTTAAATTGTGATTGTATTAGTCAAGTTAAGG
ATAAGGCCCTCGATACGATTTACAGGGCATTCCCCTATTCTCAAAGACCC
AAAAGAGAGGATCTCGACTTGGAATGGAGAACAGGAACCTCAGGGAGGCT
GATTTTGTATGATGAGGACTCAACGACCAAGACTGAAGGAGATTGGAAGC
GAATTAACACTTTGAATCATTATCGTGTCCCTGAGGGAGCTCTCCTTACT
CTAGTTCCCAAACAGAGTTCTATGTATAACATATCCACAATGTCCGATAA
AAGTGATCGTCATTTGTATCATAAATACGAAACTCTAAATTTGGCCAAAA
GCGGAGCTGGTAATGGAACTTCTCCGCCAATTAGTAGAGCAACTAGCCCC
TTGAATCCAGACTACGATTCCAACGGATTAAAAATGTGGCATCTAGTTCG
TCATGATTGGGGCGATGACAAGGATGGCGACAATCGACATAATAAAATGG
TGTCTGAAATCTATTTGACACGACTTTTGTCTACGAAAGGCACTCTCCAG
AAATTTGTAGACGATTTATTCGAAACCATATTTAGTACAGCACATCGAGG
CTCCGCCTTGCCCTTGGCTATTAAGTATATGTTCGACTTTTTAGACGATC
AGGCATTAGCTCATGGAATCAATGATATTGATGTAGTGCACACATGGAAG
AGCAATTCATTGCCACTTCGCTTTTGGGTAAATTTAATTAAAAATCCCGA
TTTCGTTTTTGACATTGGGAAGTCAAACATCGTGGACAGTTGTCTTTCAG
TCACGGCGCAAACTTTTATGGATGSTTGCTCAACTTCGGATCATGTTTTA
GGCAAAGACTCTCCAAGTTCTAAACTCCTCTATGCCAAAGACATTCCGGT
TTACAAAGATTGGGTGGATCGATATTATAGTGATATTAAAGCTATGCCAG
TTATTAGTGATCAAGATATGAACGCCATGCTCGCAGAAGAGAGCCGACTT
CACGCCAACGAGTTTAATCTCAACTCTGCTCTTCATGAGTTATATTCCTA
TGCTGTTAAATATAATGAACAATTAATATTAACTCTTGACGAAGATAAAT
TTGCGTGCAAACAAAGACTTGTGTATAAATTGGAACAAGTGCATAATGTT
ATGCAAGGTGAT back to top
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