EMLSAT00000009535, EMLSAT00000009535-705382 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009535
Unique NameEMLSAT00000009535-705382
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s613supercontigLSalAtl2s613:205707..209068 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009535 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009535EMLSAG00000009535-692301Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000042327EMLSAE00000042327-751255Lepeophtheirus salmonisexon
EMLSAE00000042328EMLSAE00000042328-751256Lepeophtheirus salmonisexon
EMLSAE00000042329EMLSAE00000042329-751257Lepeophtheirus salmonisexon
EMLSAE00000042330EMLSAE00000042330-751258Lepeophtheirus salmonisexon
EMLSAE00000042331EMLSAE00000042331-751259Lepeophtheirus salmonisexon
EMLSAE00000042332EMLSAE00000042332-751260Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774494auto774494Lepeophtheirus salmonispolypeptide
EMLSAP00000009535EMLSAP00000009535Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009535

>EMLSAP00000009535 ID=EMLSAP00000009535|Name=EMLSAP00000009535|organism=Lepeophtheirus salmonis|type=polypeptide|length=702bp
MRPLPKEPSPEKPPAPLKKAGKLNISYPTKFTHVVHVGFDPDSGEFTGMP
ESWASLLVASNISKEMQRKNPQAVLDVLNYYEISNNQQKTNKYMTQRTPS
TTEPSPRPSYSSPTPPPAPVPPVAIEPSTKKTSSTPRTPSSNSEKQDEVM
PLPPPPIATRPEKTKSIYTKPVDEDEDEGALKVPKEVIESVKSSGASSTK
KPSSGTKERSSSKKKMSDEEILDRLKQIVTVGDPNRKYTKMEKIGQGASG
TVYXAIETATGMEVAIKQMNLQQQPKKELIINEIVVMKANKHPNVVNFLD
AYLVGEELWVTMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALDFLHR
GHVIHRDIKSDNILLGMDGEVKLTDFGFCAQISSEQNKRTTMVGTPYWMA
PXVVTRKQYGPKVDMWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGKP
EIKERDKLSPVFQDFLDKCLETNPALVSIGNVGQLAMDLLLSSIKPLKVG
ALYNDALVPIVGPDMANNSLMTAAEVFVKNKFVFLQLRSAIVKGYRKQWV
HDIIDWVKRMGKFKEIICLSSIDAHERSDDQIKQENFRYLSTQGDDVDFF
LSWKSLELKENFPSLPQHKTLTEFDKLHIPGGGFSKELYKQCSKEEGLIL
HILFTFSSEGDNVPDAMRLYEYFNSWKQQAEKVVIPSSWSHLYGNRVTAS
VF
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mRNA from alignment at LSalAtl2s613:205707..209068-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009535-705382 ID=EMLSAT00000009535-705382|Name=EMLSAT00000009535|organism=Lepeophtheirus salmonis|type=mRNA|length=3362bp|location=Sequence derived from alignment at LSalAtl2s613:205707..209068- (Lepeophtheirus salmonis)
AAGGCCCGTCTAAAAGTGAGATTTGTTACACAATCTAGGCTAACATCTAA TCGTCAAGATCACGTAACTCTACTTCCCGTTGAAATGAGGCCATTACCAA AGGAGCCATCTCCTGAAAAGCCACCTGCTCCTTTAAAAAAGGCTGGCAAA CTTAATATAAGTTATCCTACTAAATTTACTCATGTTGTACACGTTGGTTT TGACCCCGATTCCGGGGAATTTACGGGTATGCCTGAGTCATGGGCATCTC TTCTTGTGGCATCAAATATTTCCAAAGAGATGCAAAGGAAAAATCCGCAA GCCGTACTTGATGTTCTCAACTATTATGAGATATCTAATAATCAACAAAA AACGAACAAATACATGACACAGAGAACACCCTCTACCACAGAACCTTCTC CGCGTCCCTCGTATTCTTCTCCAACGCCGCCTCCTGCTCCAGTTCCTCCG GTAGCAATCGAACCTTCTACTAAAAAGACTAGCTCAACTCCCAGAACACC GTCTTCAAATTCAGAGAAACAAGATGAAGTTATGCCTCTACCMCCCCCGC CAATTGCAACGCGTCCAGAGAAGACCAAGTCAATATATACGAAGCCTGTT GATGAGGATGAGGACGAAGGAGCTCTTAAAGTGCCAAAGGAAGTTATTGA ATCAGTTAAATCTTCTGGTGCCTCGTCTACGAAGAAACCATCATCAGGCA CAAAGGAAAGAAGTTCTAGTAAAAAGAAGATGTCGGATGAGGAAATATTG GATCGTTTAAAACAAATCGTAACAGTTGGAGATCCAAATCGAAAATATAC GAAGATGGAAAAAATTGGCCAAGGTGCTTCTGGTACTGTGTATMCAGCCA TTGAAACTGCGACAGGAATGGAAGTTGCCATCAAACAGATGAATCTTCAA CAACAACCCAAAAAAGAATTAATTATCAACGAAATAGTAGTCATGAAAGC AAACAAACATCCGAATGTAGTCAATTTTTTGGATGCATATCTCGTGGGAG AGGAGCTTTGGGTAACTATGGAGTATTTACCTGGTGGATCTCTTACGGAT GTGGTTACAGAAACTTGTATGGATGAGGGCCAAATTGCTGCAGTTTGTCG GGAGGTTTTACAGGCTCTTGATTTTCTTCACAGGGGCCATGTTATTCATC GTGATATAAAATCTGATAACATTCTTCTTGGAATGGACGGTGAAGTCAAA TTAACGGATTTTGGCTTTTGTGCTCAAATTTCAAGTGAACAAAATAAACG AACCACAATGGTTGGTACTCCTTATTGGATGGCCCCTGMAGTTGTTACAA GGAAACAGTACGGTCCTAAAGTAGATATGTGGTCTCTAGGAATTATGGCT ATTGAGATGATTGAGGGAGAACCTCCATATTTAAACGAGAATCCATTGAG AGCACTTTATTTGATTGCCACGAATGGCAAACCTGAAATTAAAGAGAGAG ATAAATTGTCTCCAGTTTTCCAAGATTTTTTGGATAAATGTTTGGAAACT AATGTTGATAAACGTCCCTCTGCTGACGATTTACTTCGCCATCCTTTTCT CAAATTATCCAGACCACTCATATCCTTGAATCCACTCATTCTTGCGGCCA AAGAAGCTGCTAAATCAAATTAGAAGGGGTGGAGGATTTTGAGCTGCAAT AGTGTATAAAAATTAAATAAAAGTTCTTACTACCAATTATAATAACTTCA TTCTTTTTTTGTTGCCATTAATATTATACATTAACGCTAAATGATATGAT GAATATCCTATTTTTTCTAAAGTATTAAGTCAGCTTTTTTTTTATAATGA AAAAATAAATTATAATTATTTTGTTCTTTCGTTATTGTCATAACATCATT ATAATAAAATTGAGTGCCTTTAGTTGTTTATTTGTCTCCCAGTCCTACAT CATATTAATAGGTCTCTGTTCGACACACTAAGTCAAGAAATATTATGCGT CTTAATTATTTCATTTTGTTTAGTTTAACTCTAATCATTGCAAGCTCTCA CTCAATTTGCTTTATCCACCAATCATCATTCATAATTATGTAATGTGTGT GCAAACATTGGTTTGAATTTATTGTTCAAAAATAGTGATGTACTTATTCA TTGTGTTTGTGTACCTCTCCGACACAAATTATAATTATTAATAATATATT ATAATGTCTTTATAGAAGCTATTTTTCCATAAAATTTATTGCCCGCTACT ACTATAACATACCAATATTTCCCTGACAAAAATAATACCTTGTCGTAGTT ATATATTTATTTTATTTTTCCATCTTTAACGCGAATAAAAGGATGCATTT CATTTATGAACACACACTTATTGTTGTTATTTCTTTTCTCACCTAACTTT ATCGGCTTTTTWAGGGGAGAGGKTCTAATTTTTSATTCTTCTTATCATTT TAAAGCCTGCACTCGTTTCCATCGGAAATGTTGGTCAGTTGGCAATGGAT CTTCTTCTATCAAGTATTAAACCACTCAAGGTGGGAGCCTTATATAACGA TGCCCTTGTTCCTATAGTCGGTCCAGATATGGCGAACAATTCATTAATGA CTGCGGCTGAAGGTGAATTGATATCTTATTATCTGACAATTTTTCAATCA TAGTAAACGATATCTTTTTCAAAAAATAATAATTAGTATTCGTAAAGAAT AAGTTCGTGTTTCTTCAACTGAGATCGGCTATTGTTAAGGGCTATCGGAA ACAATGGGTTCATGACATAATTGACTGGGTCAAACGAATGGGTAAATTCA AGGAAATAATTTGTCTCTCTAGCATTGATGCACATGAGCGATCCGATGAT CAAATTAAACAGGAAAATTTTCGATATCTTTCAACCCAAGGCGATGATGT TGACTTTTTTCTAGTAAAATCCTTTATATATATATATATGATGCACACAA ATGATTAATTATATAAATACTCTTTCTAGAGCAAAGAGTTGGAAATCTCT GGAATTAAAGGAGAATTTTCCATCCCTTCCTCAACACAAAACCCTGACTG AATTTGATAAGCTACATATTCCTGGAGGAGGTTTTTCCAAGGAGCTATAT AAACAATGGTAATTAATCAATTGAATATGTAATATCACTTTTTTAATATT TGACTTTTATTTCCATTGAGCAGTAAGGAGGAGGGACTGATACTTCATAT TTTGTTCACCTTCTCTTCTGAAGGTGACAATGTTCCAGATGCAATGAGAC TCTATGAATACTTTAATTCCTGGAAACAGCAGGTACGTTCTCTGCGAACT CTTTTAAAGATTTCTTACTCATTAATTTGAATATTATTAGGCGGAAAAAG TGGTCATTCCCTCTTCTTGGAGCCATCTCTACGGTAATCGTGTTACTGCA AGTGTTTTTTAA
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