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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s615 | supercontig | LSalAtl2s615:613087..620800 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000009561 >EMLSAP00000009561 ID=EMLSAP00000009561|Name=EMLSAP00000009561|organism=Lepeophtheirus salmonis|type=polypeptide|length=917bp
MTCLAKITSGSHGLPFFFQMLLLHCQIIIVFFHFTTLCYANSSLQLTSND
VLNINPSKNKAEIAKSSSIAHSPSNTTAQLNNRFELRCSSGKLENDVQWY
VMKESIFKKITKIGHNFRIHQNGSLIFRKIEKNDEGVYRCDIQVPDNSEN
GEKHYSYVASVIVESKVKIQSSPDVIRKEYGTSVKLNCAATGIPAPVIDW
IRSGNKIVQGTKYSPYSYYSRSSLTINVTETTNYTCKATNQMSSERSYDQ
KSFMVYVSEKVSDTDGKESKPKKCQGYCAPYNGRVCRRYLPGRGLVWFNI
SQDSSGGWLNEQITESLWKELISNLIEPCRSAAEALLCKYAFPDCALQDS
CAIGLPLCYEDCVALRSHYCFNDWALIMDNKRKDIFIEAXGHFRLPICEK
LPKYNNKSKICTKSSITTMRYEMATTSCMKGNGRFYQGSVNQTHEGVSCQ
PWFTSFPHTQTTPENIFPEMRNAGNNCRNPGGTEPEPWCYTVDPLIRWQY
CSIPKCDNVSKSFDYYENEGYDTRIREDYYKILMEVITPEFIGLLVSVGI
ATVAIIVITSLICANLCRKKSGYTQANVQNIDIDLDKLPENAAYHQTSGQ
INPRLEKLEYPRNDIIYIRDVGQGAFGRVFQGKAPGLKKGEEFTMVAVKM
LKEEATDDLLRDFEKEAILLSEFDHPNIVRLYGVCAIGKPMCLLFEYMAK
GDLNSYLRSNTPDNYIVRKPNGISLGSNQSSFMTDIKVSHVEQVSISKQI
CNGMVYLSDRKYVHRDLASRNCLIDQSGTVKIADFGLSQRVSLQEYFRGD
VSDNIPIRWMPLEAVLHNKYTIESDIWAFGILLWEIFSLALQPYYGLSNE
EVIKFLKEGNTLGCPENTPKSIYKIMKSCWNPNPSVRPMFRILHRELETI
EKELTILQRHYKSQKNS back to topmRNA from alignment at LSalAtl2s615:613087..620800+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000009561-705408 ID=EMLSAT00000009561-705408|Name=EMLSAT00000009561|organism=Lepeophtheirus salmonis|type=mRNA|length=7714bp|location=Sequence derived from alignment at LSalAtl2s615:613087..620800+ (Lepeophtheirus salmonis)
TTTCCTATGATGGTTTTCTTTGTGTTGTTGTTTTTGTAGTGGTACTATGT
ATAAAAGAAAAGAAAGTAGAATCACGATGTCTTCTTCCTACTATGTCTAT
TATTAAAATGGGGTCTTTAAAACCGACTCCATTTTTATTTTGTTTTTCTA
TTACATTTATGATTTTGATACTTGTAAGTGCCAAATTTATTATATAATTG
TTTCACTTAAAGAATTTGATGAATTATTATTTACTACAAACTCATTATCA
TATTAATTATAACATATAAACAATGATTCTCAATCCGTTCTTGTTTACTA
ACATACATTTATAAGTGATAATTATTATTTCGAGAATCTGTTAGAGTCTT
TATTGTTATTCTTCCTACAAATAATTCTACATATGAATTTATTCCGTGTA
CAAGTGTGAAATAAAAAACATTCCACTATAGTTATTAAACGTTGAATAGA
GCCTCATATGTGTCAATCCAATCAGGAATATCAAAACGTGATGATGTTAG
ATACATATTTTAATCTATAATAATAAGTATGTACAAAAAACATCTAATTT
ATAGAGAGAGATTATTATAGACTTTATGAATATTTCCTGTATGATTTAAA
TTACTCGACAACAAGATCCTTCCGAAGATTTTTTCAAATGTTATAATATA
TATATTGTACAATGTACATTAAATCATATTTTTCATGAGGAAATAAACAG
GAAACGTGCATTTGATTTTAATTCTTGTGATTGTGAGTGAGTAAAGAGTT
GTGCCTATTTTGNNNNNNNNNNNNNNNNNNNNNAAAAATAATTAATTTTT
TTTTTGTCAACATTTATTTTACGAATAATTTAGATTTTTTACATTTATAT
GATAATATGCTCATTAATGAATGAATCTTGAAAATATTAATTATTTATCA
ATTTTATATATATTTAATTAATGATTTTTATTAGCAATGCCTTAATAGTG
TACCATTTGCATTGATTTAAGATAATTAAAACAGCACATGGTGTGAAGGA
ATAAAAAACCTTCACTTCTCCTTTCAGACCCCCAAATGAGCTTTTCCTAA
TATATTTATGACTTCCTTTGAGAGTAATAACATATTGTTTTCTTATAAGG
TTTTTTTTTTTTTTTTGAAACTACACAAATTATCTTATTCTTCAGCCTTG
AAACGTTTTCGACTTAATTAAAAACAATAATCACTAAAAATAAAATTCTT
ATTGCCAGACCATCTTTGATATAGTATGTGTATCCAAAACAATTTCTACT
ATGTATACATAATTGGGTGCTATGTGTACCCTTGTATGTAGACGTAACCA
AGTCTTTTTTTTTTTTGTTAAAATGGAATCATTAATCATTCAAGTTTATT
ATACATTACAAACCATAGTAATACAAATGTATATATACATATATTTATGG
AATTTTAAATTTCAAAAATAAAATAGGGATCCAACTCTGGGGTCTCTTTT
GTTATGATATGTATCTCTTTTTATTTTATGCAACCAATCTCAAGGACTTT
AAATATACATACATACGTACTTGCCCATCTTTTTTAGTGCTCCCTAACAA
TGTCTTGGAAGCAAGTCTCTTTCAAATTATTTATATGTTTTTTAAAGAAA
TAATATTAGAACGTAGGAAGATGCTTCGATTAATCCATGTTCTAGCGATA
TGCGTCCGCGAACACAGATGTTTTGATTTTTTGAAGGATTGGATGTCAAA
TGTTTTGTTTTTTGTGTGTTTTTTAATATAGAAATAGAGATTCAATTTCC
TAAGATGTACTAATATGCATTTCTCAATTTTTCAGTTATAAAAAGATCAC
CATCTTAGAAGACTCTTACTCAAAGTATTCCATTATTAATAATATTACTC
CACCGTTGTTTCTTACTCAAGATCTTATTCAAAATTATGATGAAATTCGA
TCTCAAACTTATTATAATAGGGGAAAGATATTTCACGAAATTCCATTCAT
AACATCAACAACATCCTTTAAGACGAAGAAGTGTGCAAGAAAGCCGGAAA
ACAACATGCAGGAGAAGCAAAAAAAAATCACTTAACATAAATATATGACC
TGTCTAGCCAAAATCACGAGTGGAAGTCACGGATTGCCTTTCTTTTTCCA
AATGTTGCTCTTACATTGTCAAATAATTATTGTATTTTTTCACTTTACGA
CTCTTTGTTATGCGAATTCCTCATTACAACTCACATCAAATGGTAAGAAA
AGAAAAGAACAGATTTACATTCTCAATCTGCATATTTTGTCCATAAATTC
TACTTGAAAACAACTTTGTAGTGGGATGTACAATATAGAGATGAATTACA
AAGTCACATTAAGTCCATTTAGTAGAAACATTAAAGTGATTTATGGATTT
TAAAAATAATTATTACTATTTTATCATAGAAACGAGTTTTGTTTCTTCTT
TAAATGCACATTAATTAGCTTAATAAATGCTTGTGCTCATTGAGGATTTG
ACCTTAAAATATGGTCAGTGGCGTGTTGTTTATATCAATATTATTATGGC
CAATCTTTTAAATCGTTGCTGCTTGCATGATGATGATGATGACAAGTCAT
GAAATCATATATGGTTATATATTTGCATTTTATATGTGCAATACATATTG
AAAATAAAATATATGTTTTTAATGGATTATTGTTTTTCATACATGTTCAT
ATAATATAGGTGCATACATGCATTCAAATTGATTTATATCAGGCTAATAA
CATATGTTATAAAAAAAAGTTAAATTATATACAACTTTGAGAAACGGTTA
TTATTAGTATCAATGTGTAAAAGACGACTCTCCAAAGATAAAATAATAAA
AAAATTATTTATTAAACTATTAATTATTTTCATGTCGAATACATGATATT
CAATCCCTCCTCCCCTGCAGAGACTAAAAAAAGGATATAATATCATATTA
TCAGAATAGATTCCAATGATTCCCTTATGAGAAAATTTGAGTTTATGATG
TAGTCGTTCTGTAAAAAATCATTTTCATTTGTATAATTTTTCATTCAATT
AAAATTTTTATGTCCGTATAAATCTTCTTTTTTCAAATAATAGATGAAGA
TGGTAATAAGAGCAAATTGAATAACTGCAGTCTTCATACGTTATGTACCA
TGTGCAACTTGTCCATTTATTTAATTAATTTTTCAATTTATTTTTTTTCG
CAAAATAATTAACTTTTATTTTACCTTGTATACTATGTATAGGGATGTGA
TAATTGTCGAAATCCTCCTGAGTGTAAATAAAAAAGAAAATTATTTGTTG
GCAAGTTTTGATAGGCGATATATCTATATAAAAACTATAGTTCTTGCTCG
CAAATAAATTTGAATTTTCAAAATAGGGGGGGGGGGGGGTGGCTAATTAA
TAAGAGCATTAATATATTGCATGTTACCAACCTATACCTTTTTTAATGCA
TGCTTACGAGTAGTATGTGTCAGTACTAGAAATTATTAAAAAGAAAAATT
ATAGGGAGACGTGATCAAGGAACCAAAATTATCAATTTTAGGACTGAACT
GGACAAGTTGCAGTCTCAGTCTTAAATAAGGATCGACACTAAACTACACA
TGAGGCTTCCGACAATTTTCACATCCCTAACTACTAACTATGTACATCTA
AGCTATCTCTGAGAATTTTTTTTAAACTATTTATCATGGGGTGCTACTAC
TTCCCTGAAGGAATTAGTATGTTGATACTTTAAAAAAAATGTTTTCTTAG
CTGTTTCTTTAAACTAATACTTATGGTGTATTGTTTCTCCTTTATGCATA
TTATGTAAAGAATATATAACTTAAAGTAGTTTGTAACTCATTTTCGTTAG
ACAATCTAGAGTAAATAACTCGTGAGTTTGTTTATTTAACAAGGCAATAG
TTTAAAAATTATTGGTGTTTTTTTTTGTTATTTAAAAATATATATTCTCG
TACATTGTAAACTGTATTATGCTTAGGGATGTGAAAATTGTTGATATCCT
CGTGAGTATACATTTCAAAAAAAGTATATGTAAGTAACCTGCTGGACATT
AGTGCTCTTATCAATTTTGTCTCCCTAACGTATTAGCCAGCTAGCTTTGG
CTATAGAGCATCGCTTTTATAGTTCTACCTGGAAAAGTAGAGTTATTAAT
TACATTTAATTTATCTTATCTTTTTTATTGAATGAATGGTGCAAACTTAC
AAAGTTATATAATTAGATTTGAATGTTCAATTTGTGTTTATTCCCTAGAT
GTACTCAATATCAATCCTTCCAAGAATAAGGCTGAAATTGCTAAATCTTC
TTCAATTGCACACAGTCCATCAAATACTACTGCCCAATTAAATAATCGAT
TCGAACTCAGATGTTCCTCTGGGAAATTGGAGAATGATGTTCAATGGTAT
GTGATGAAAGAGTCCATTTTCAAAAAAATCACTAAAATTGGTCATAATTT
TCGAATTCATCAAAATGGTTCTCTTATATTTCGAAAAATTGAGAAGAATG
ATGAGGGTGTGTATCGTTGTGATATCCAAGTTCCAGACAATAGTGAAAAT
GGAGAAAAACATTACTCTTATGTTGCTAGTGTCATCGTTGAATCCAAAGT
CAAGATTCAAAGTTCACCTGATGTTATTCGAAAAGAATATGGGACTTCAG
TGAAGCTTAACTGTGCTGCTACGGGGATTCCTGCTCCTGTTATTGACTGG
ATCCGTTCTGGAAATAAGGTATTCAATGCTTCCTTTCATGTTGGTTCTGT
GCTTGCTTTATATTTTAACATTTGGGTGATACAGATATAATCTAATAAAG
TGTATTTTTTATGTCGAATGATTACTAACTTATCTCTTTGTTTCTTTTCT
CTTTTTGTGCACCTAACAAATTAACAAACATAGTTCTCCATTATTAACGG
GAAGTCTGAGGTATTTAACCTTAATTATATATTTAAATACTAATGTGACT
CTTTTTTTCTTTTAATTACCAAACTACTAAAATATTTTCACTCATAATGA
ACCAATCTTCAATTATAGATTGTTCAAGGAACAAAATATAGTCCTTATTC
ATACTATTCAAGATCAAGTCTGACAATAAATGTGACTGAAACAACCAATT
ATACCTGTAAAGCAACAAATCAAATGAGTTCGGAGCGATCATACGATCAA
AAATCTTTTATGGTGTACGTTTCTGAGAAAGTTTCCGATACGGATGGAAA
AGAATCGAAGCCAAAAAAATGTCAAGGATATTGTGCTCCTTATAATGGGC
GGGTCTGCCGTAGATACCTCCCTGGTAGAGGCTTGGTTTGGTTCAATATA
TCCCAAGACTCGTCCGGCGGGTGGCTTAATGAACAAATTACAGAGAGTCT
TTGGAAAGAGTTGATTAGTAATCTGATTGAGCCCTGTAGATCTGCTGCCG
AAGCGCTTTTGTGTAAATACGCGTTCCCTGATTGTGCTCTTCAAGATAGC
TGTGCCATAGGCCTTCCTTTATGTTATGAGGATTGTGTGGCTCTTAGGAG
TCATTATTGTTTCAATGACTGGGCCCTTATTATGGATAACAAACGAAAGG
ACATTTTTATCGAGGCTAYAGGACATTTTCGACTACCAATTTGTGAAAAA
CTGCCTAAATATAATAATAAATCAAAAATATGCACGAAATCTTCAATTAC
TACAATGAGATATGAAATGGCTACAAGTAAGATTTTCTTATATCAGTCAA
TCTCTTAACATTTACCAATGCATTTGTTAAAAATATTTCCAGCTAGTTGC
ATGAAAGGGAATGGAAGATTCTACCAAGGTTCTGTTAATCAAACACATGA
AGGTGTTAGTTGCCAGCCCTGGTTTACTTCCTTTCCGCACACCCAAACCA
CACCTGAAAATATATTTCCTGAAATGAGAAACGCTGGCAATAATTGTAGG
AATCCTGGAGGAACTGAACCTGAACCATGGTGTTATACAGTTGATCCTCT
GATTCGTTGGCAATATTGCTCCATTCCAAAATGCGGTAAGATAAAATTCT
AATATCATTTGAATTTAAAATACATAAACTTAATTTCAATTCTTGTTTTT
TAATGGAATATTTAGATAATGTTAGTAAATCATTTGACTACTACGAAAAT
GAAGGCTATGATACACGAATAAGAGAAGATTATTACAAGATACTCATGGA
AGTTATTACTCCCGAATTTATTGGACTTTTGGTATCTGTGGGTATAGCCA
CAGTTGCTATAATAGTTATTACGTCATTGATTTGTGCCAATTTGTGCCGA
AAGAAATCAGGATACACTCAGGCTAATGTTCAAAACATCGACATTGATTT
GGATAAATTACCAGAAAACGCTGCATATCATCAAACCTCGGGTCAAATAA
ATCCCAGATTAGAAAAGTTAGAATATCCTCGCAATGACATTATTTACATT
CGTGATGTTGGCCAAGGAGCGTTTGGAAGAGTATTTCAAGGGAAAGCGCC
TGGGTTGAAAAAAGGAGAAGAATTCACGATGGTTGCTGTTAAAATGCTCA
AAGAGGAAGCAACAGATGACTTACTTAGAGATTTTGAAAAAGAAGCAATT
TTACTTTCAGAGTTCGATCATCCTAATATTGTTAGGCTTTATGGAGTATG
TGCCATTGGGAAGCCCATGTGCCTATTATTTGAATATATGGCTAAAGGTA
AGGCATATTGAGCTAAGATTAATAATTTTACCTGATGCTAAACATTCATT
TTAGGGGACCTCAATTCTTATCTTCGCTCAAATACCCCTGACAACTACAT
TGTTCGCAAACCTAATGGTATATCACTAGGGAGCAATCAATCCTCATTTA
TGACTGATATTAAAGTATCTCACGTGGAACAAGTTTCGATCTCCAAGCAA
ATTTGTAACGGAATGGTCTATTTATCAGATCGCAAATATGTTCACAGAGA
CTTAGCTTCTCGAAATTGTCTAATTGATCAGTCTGGAACGGTTAAAATCG
CAGATTTCGGTTTGAGTCAGAGAGTATCTTTACAAGAGTACTTCAGAGGA
GATGTGTCTGATAATATTCCTATTCGATGGATGCCTCTAGAAGCTGTTCT
TCATAATAAATATACCATTGAGAGTGATATTTGGGCATTTGGAATTCTTC
TTTGGGAAATATTTAGTCTTGCTCTTCAACCCTATTATGGTTTGAGTAAT
GAGGAAGTAATTAAATTTTTGAAGGAAGGCAACACTCTTGGATGCCCTGA
GAACACACCCAAGTCGATTTATAAAATTATGAAATCCTGCTGGAATCCCA
ATCCTAGTGTGAGGCCCATGTTTCGTATTCTTCATCGTGAGCTTGAAACT
ATTGAAAAGGAGTTGACCATATTGCAAAGACATTACAAGAGCCAAAAGTC
AATAGTTTCTGTGGAATCCATGGGAAGAATGACTCCACAARCCCCAAAAT
RTTTTYAAWAAGAGATCWTTRTATWAAYAAGCCATAATTTATTAAATAAA
CTAGTCAATCTCATGATTTTTTTAGAGAAAAAAATAAGATAATATCTMTT
TMTTATWTRTMTAGWTTTTTTTTTCAGTMTTTTTTTTTTTTTGTACTTTT
MGGTTNNNTTACTTTTGGTGCACAACTAACCAGGGTTTTTTTTTTTTTCW
TTTATATACCAAATACACATCAGATAATTGCTTATCAAAATTATCTTTCG
AACTTTTTATAGTATTTCTATATTATTTATTATACAATTTTATTACCACT
TTTATTAYTAATACATATATTTATATATATGATAATAAATATGATATATT
CAAGAAATTCTTGA back to top
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