EMLSAT00000009673, EMLSAT00000009673-705520 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009673
Unique NameEMLSAT00000009673-705520
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s623supercontigLSalAtl2s623:283132..286240 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009673 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009673EMLSAG00000009673-692439Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000042909EMLSAE00000042909-751837Lepeophtheirus salmonisexon
EMLSAE00000042910EMLSAE00000042910-751838Lepeophtheirus salmonisexon
EMLSAE00000042911EMLSAE00000042911-751839Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775802auto775802Lepeophtheirus salmonispolypeptide
EMLSAP00000009673EMLSAP00000009673Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009673

>EMLSAP00000009673 ID=EMLSAP00000009673|Name=EMLSAP00000009673|organism=Lepeophtheirus salmonis|type=polypeptide|length=445bp
MHVVEMAGAYVFLFMMNSDLMIIQFLRRVPSMYHLLAPVIIFISLFSRHA
KSEDIFFKQLYGSCSTNSYMLTIYTSKPFSGRLFSKNFKECLSLGNGTRN
LILSVGLSCGAEFEKGLKFSDQIYVQKDPYLQQVDDEVVEIRCEPLKNGT
ASLIRYGENVDPIFYQNLRTRFAVNESKDSLETDKGHVRTAEWHNEVDNE
VDEGVYVQAWMDLLPLLSGYQHFFFIGQNVSLIIKWKNPKSKHQPKVGSC
FASSGKKESLRLTNPAGQSVQNIFPSNFTYYTSKSGITTATASFLMFKFA
NSNELILKCRLIFASKVPIILEARAENIDDDQGSEXKFNSLNQEIPSHYL
RSDDLSAQESTQELLEIERDFEEPLVCMSRLKMVLAFGVLILVLFIALVF
SCMLWSRAKSFTSQLNSNTKFPGGLIPRPFKRIPGPYVVSSLPYR
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mRNA from alignment at LSalAtl2s623:283132..286240+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009673-705520 ID=EMLSAT00000009673-705520|Name=EMLSAT00000009673|organism=Lepeophtheirus salmonis|type=mRNA|length=3109bp|location=Sequence derived from alignment at LSalAtl2s623:283132..286240+ (Lepeophtheirus salmonis)
ATGCATGTTGTTGAGATGGCAGGAGCGTACGTCTTCTTATTCATGATGGT
AATAAAAGTACCGAAAGGATAAAAGTATACAAGTGATATTATTATTATTA
TTATTAGAATAGTGACTTGATGATCATTCAGTTTTTGAGAAGAGTACCAA
GCATGTACCATCTATTAGCTCCAGTGATTATCTTCATCTCCCTATTCTCC
AGACATGCAAAGTCTGAGGATATATTTTTCAAACAGCTGTACGGATCCTG
CTCAACAAACTCATATATGTTAACCATTTACACATCAAAGCCCTTCTCGG
GACGACTCTTCAGTAAGAACTTTAAGGAGTGTCTAAGTTTGGGGAATGGA
ACTCGCAATTTGATTCTGAGTGTGGGTTTGTCCTGTGGTGCAGAATTTGA
AAAGGGACTCAAATTTAGTGATCAAATCTACGTACAAAAGGATCCATATC
TTCAACAAGTTGATGATGAAGTCGTGGAAATTCGATGTGAGCCATTGAAA
AATGGAACTGCCTCATTGATTCGTTATGGAGAAAATGTGGATCCAATTTT
TTATCAGAATCTGCGCACCAGGTTTGCTGTGAATGAGTCAAAAGACTCTT
TGGAGACGGACAAAGGACATGTTAGGACTGCAGAATGGCACAATGGTATG
GAGGTTGAAAATTCATATGTAAATGGTATTTCAATGTCATATTGCAAAAT
GAGTTGACCTAGGTTTTTAGGGTCAGCAGATGCTACTGTTACTGCAGCAG
ATGGCTTTGTATTTTGCATCTGGCCTTTATAAATTGCATAAATGTGAATA
TTTTATTAAAGGGGGGAGAGAGGAATTATTCAGATCTTGCTAAATAGCAA
CAGTGTATTATGAAGGTCCGGGGGGAGGGGGAGCGTATATAAATGAATCA
TTGGAATGATATATTTATATACATATATATGGTTGCTCAGAGTCCCCAAA
GAATCTCATAAAAGTCTTGAGAATCGGAGTAATTATTTCACTTTTATTAT
TTTTAGACATAGTTTATTTAGTTGAATTATTATTTAAATGATGCTAAATT
TATACAAATATAAATATATGTACATATATTTATATTTGTGTGAATTTGAG
AAAGTAAAAGTTAAGACAAAAAAAAAAAATTATTTTAACACACACGTTAT
GATATACGAAAATTTGCTACCCCAAAAAACTCTCTCTAAGGTTTTTATTT
TATTTTATGTCACATAATGTAGAAATGTCTGGAAATAATGTCATATCATA
TGAATTTATCTTTAATTCCCTGTATAAAGTAAGTGAAATTATTATGTGTA
ATGACGATTTCAATCTAATAATTAGGTTGTATAGAATAAGTAACTACGGA
ACCATTAAAACGTATTTTCACTCAACCTCATAAATTACTGTTAAATGTTA
TACAGCACAATACATATTTCAATTTCTTCCMCCATTTTCTTTTTTTTTTT
TAATATAATTATTATCAAACCTGTGGAACCGTTATTGATTTTCTTTTTTA
TATATATTAAAGACAGACATGCTTTTTAGAAAAAAAAAATCCTAAGAATT
ATATTTGTACAAACATGTTGTATATACGTATATTAGAAACTCATTGTTAA
AATTTTCTGCATTTCATAATTAAATTTCAAATTTCTCTCATATTTCATGA
CTATTACATAAAGATATAGTTGTTTCATGACTTTTAGTAGATAAATAAGG
ATTATGAATTAATATCTAGAGTGGAAAATTATTTTCTATTTTAATAAGTA
TGTTTAAAAATCATGTTCTATTAATTAATTCTAAAAATTGGGGACTTTGT
AGCGAGTTATACATTGCTTTAAACAAATGATATAAAATAAGTCATTTTTC
TAATTAATTATATATTTGCATTTAATAGAAGTTGATAATGAAGTGGATGA
AGGGGTGTACGTACAAGCCTGGATGGATCTACTCCCTCTTTTATCCGGAT
ATCAACACTTTTTTTTTATTGGACAAAATGTAAGCCTCATTATCAAATGG
AAAAATCCAAAGTCAAAGCATCAGCCCAAAGTAGGCTCCTGCTTTGCTTC
CTCCGGGAAGAAGGAGTCTCTTCGTCTTACAAACCCTGCTGGTCAATCTG
TGCAAAATATATTTCCCTCAAATTTTACATATTATACTTCCAAATCTGGA
ATCACAACTGCAACTGCCTCCTTTTTGATGTTTAAATTTGCAAACTCCAA
TGAACTTATCCTTAAGTGTCGACTTATTTTTGCATCAAAAGTACCCATTA
TATTAGAAGCTAGGGCCGAGAATATTGACGATGATCAGGGCTCTGAARCA
AAATTCAACTCTTTAAATCAAGAGATACCTAGTCATTATCTTCGATCCGA
TGATTTATCTGCACAAGAGTCAACGCAAGAGCTTCTCGAAATTGAAAGGG
ATTTTGAGGAGCCCCTGGTTTGTATGAGTCGCTTAAAGATGGTTTTAGCC
TTTGGGGTTTTGATCCTTGTTCTATTTATTGCACTCGTTTTCTCATGTAT
GTTATGGTCTCGTGCCAAGTCTTTTACAAGCCAATTGAACTCCAACACAA
AGTTTCCTGGTGGACTCATTCCACGCCCTTTTAAGAGAATACCTGGACCC
TATGTTGTATCAAGTTTGCCGTATCGATAAACGACTTGGAAGTTATCCTT
CCTTATTCATTCAGAGTCTTGAAGAAGAATTGTCTATTTATAATAGGGTT
GGGAGTCGTCATGGGACAGCCTCGAGTCTTTAGTCAGTACCTTGCATTTC
TTTCTTAATTATTTATACCGTTTTCAAAATATCAAAATATACGACCATGA
GATTATAATAAATAATGTTTTACACACATATAGGAGTATCTCATCATTTT
AGTAATCTATGTAGCACAGGGATTAACTCTGCGTCAAATTGTTGCTTAGA
TTCTCATTCATTAGAATTAGTATTTATTTATTATATATATACATTATGTT
ACTTTATTTGCAAAAGTTTTAATTGAATCTTGTTATTGCATGACATTGCG
GTACACTGTTGATTATACTGAAGTATGTACAGCCAGGAGTAAGCGTTCTT
TGTGCCATATCAATCTACACATAACCTACAATTGACATACATAATACATA
TCATTTAAA
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