EMLSAT00000009677, EMLSAT00000009677-705524 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009677
Unique NameEMLSAT00000009677-705524
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s623supercontigLSalAtl2s623:345770..348621 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009677 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009677EMLSAG00000009677-692443Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000042923EMLSAE00000042923-751851Lepeophtheirus salmonisexon
EMLSAE00000042924EMLSAE00000042924-751852Lepeophtheirus salmonisexon
EMLSAE00000042925EMLSAE00000042925-751853Lepeophtheirus salmonisexon
EMLSAE00000042926EMLSAE00000042926-751854Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776656auto776656Lepeophtheirus salmonispolypeptide
EMLSAP00000009677EMLSAP00000009677Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009677

>EMLSAP00000009677 ID=EMLSAP00000009677|Name=EMLSAP00000009677|organism=Lepeophtheirus salmonis|type=polypeptide|length=885bp
MGSRTTRKKKESSKRRWGEGNGFEGAGGYMNAKKNKLLQQFHDDKEINES
DSKSSIFKGVSIFVNGYTDPPSDELRRIMMEHGGSFHHYLIPRKTTHIIA
TNLPETKIKNLKGDEVIVNPSWITDSVKTGSLLDYKPYLLYTNSNKNQPQ
IKFDKISRVTKDANDENFIGEFYGNSRLHHISSMACNFKTLVSEMRDAKL
DDLYPAREKLKSLKHRSSTEPVIMHIDMDCFFVSVGLLCNPVLKGEPVGV
THSKNGEGPSSSTTVNNSMSEIASCSYEARAAGVKNGMFVGDAMKLCPNI
KFIPYDFDAYVKVATKLYEIVANYTLNIQAVSCDEMLVDLKDIQADPIEF
AEVLRKEVFEFTGCHASVGIGGNILLAKLATRNAKPNGVFRISSDEREIA
EFMKSVSLSDLSGVGRKMVFRLKENFNVSLCGEVRAKLTLQDLQKEFGTK
TAEXNYGIRFQEEAEAYDFLERLSKEVSIRCRNLNILGGRSITLKLMIRA
DGASKETSKYMGHGICDNKSRTSTLSMATREKSVILREVKCLLKKMDVVV
SDIRGVGIQIGKLDKKNSDSLAGSTSVLMSFINKVNPLDTSSSSKELSIN
QQSPSKNCNPSYPNSKELSNDLSLSMSQIDQNVFKSLPEDIKMEIELQMK
IKKSNKCNNKELPKSRITKMNDTSRLSYSQLDQDVLAQLPQELLEEVKNT
YGSGPSTRNSSKTADNAFKVLMSPSKSKSPLKKKSPVKRRGRKPTVVSPK
KQLLEEKFSVDLMKKEDSCNVEVVRQNGRLEFSSPPPPSDADLNGVRDLE
GIRELIFEWIRSSDSPTQDDIETVSSFFFIKLSESEYDFVRSLLLQLRRL
TSIKDEDSPWRSFYLNLYEKVQSIMINKEGLKLYV
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mRNA from alignment at LSalAtl2s623:345770..348621-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009677-705524 ID=EMLSAT00000009677-705524|Name=EMLSAT00000009677|organism=Lepeophtheirus salmonis|type=mRNA|length=2852bp|location=Sequence derived from alignment at LSalAtl2s623:345770..348621- (Lepeophtheirus salmonis)
ATGGGAAGCCGAACCACAAGGAAGAAAAAAGAATCCAGCAAAAGGCGATG
GGGTGAAGGAAATGGATTTGAAGGCGCCGGGGGATATATGAACGCTAAAA
AGAATAAACTTCTTCAACAATTCCATGATGATAAAGAGATAAATGAATCA
GACTCGAAGAGCTCCATTTTCAAAGGAGTTTCTATTTTTGTAAATGGATA
TACGGATCCACCAAGTGATGAGTTGAGAAGGATTATGATGGAACACGGTG
GATCATTTCATCACTACTTAATTCCAAGAAAAACTACTCATATCATAGCT
ACAAATCTCCCCGAGACTAAAATCAAAAATCTCAAGGTAAAAATAGTATA
CAAAATCTTAACCTTGTTTGAAAATTAGTTGATGTTTTAGGGTGACGAAG
TTATAGTTAATCCTAGTTGGATCACTGACTCCGTAAAAACGGGATCTTTA
TTGGATTATAAACCATATCTACTCTATACGAATTCAAACAAAAATCAACC
TCAAATTAAATTTGATAAGATTTCTAGAGTTACAAAGGATGCTAATGATG
AAAATTTCATCGGGGAATTTTACGGCAATTCCCGCTTACACCATATATCA
TCCATGGCCTGTAATTTTAAAACGTTGGTTAGTGAAATGAGAGATGCAAA
GTTGGACGATTTATACCCTGCAAGAGAAAAATTAAAGTCCTTAAAACACA
GAAGTAGTACTGAGCCGGTGATTATGCATATTGATATGGATTGTTTCTTT
GTATCTGTGGGACTACTTTGTAATCCTGTGCTCAAGGGGGAGCCTGTTGG
TGTAACTCATTCCAAGAATGGGGAAGGGCCCTCCTCATCCACAACAGTCA
ATAATTCCATGAGTGAAATAGCGAGTTGTTCATATGAGGCTCGAGCAGCA
GGMGTTAAAAATGGAATGTTTGTTGGAGATGCCATGAAGCTCTGTCCTAA
TATAAAGTTCATTCCGTATGACTTTGATGCATATGTTAAGGTTGCAACAA
AACTTTATGAAATCGTTGCCAATTATACATTGAATATCCAGGCCGTAAGC
TGTGATGAAATGTTAGTCGACCTCAAGGTTAGTACTCTTTATATGTAGAG
ATTTGTTTTTGCATATTTTGAATCTAATAATAAATTAGGACATCCAAGCT
GATCCAATAGAATTCGCTGAGGTTCTTAGGAAAGAAGTATTTGAATTCAC
GGGCTGTCATGCCTCAGTTGGAATTGGAGGAAATATTTTACTTGCTAAAT
TAGCTACAAGGAATGCAAAACCGAATGGTGTGTTCAGAATCTCTTCGGAT
GAAAGAGAAATTGCCGAATTTATGAAGTCTGTATCTTTGTCTGATCTTTC
TGGAGTTGGTAGAAAAATGGTTTTTCGACTAAAAGAAAATTTCAATGTTT
CACTTTGTGGAGAAGTTCGCGCCAAACTAACACTTCAGGATCTCCAGAAA
GAATTTGGAACCAAGACCGGTAAAAATATATATAACGGTGTTCGTGGCGT
CANCTGATGTGACAATCAGCTATGGCCATGAAAGGAAATCTGTATCAGCC
GAAGMCAACTATGGAATTCGATTTCAAGAAGAAGCTGAGGCCTATGACTT
TTTGGAGAGACTCAGCAAGGAAGTATCTATTCGTTGTCGGAACCTTAACA
TCCTTGGAGGTAGAAGTATTACACTGAAATTAATGATAAGGGCAGATGGA
GCTTCTAAAGAAACTTCTAAGTACATGGGGCATGGCATATGTGACAATAA
GTCAAGAACTTCGACGCTCTCAATGGCAACAAGAGAGAAAAGTGTCATTC
TCAGAGAAGTCAAGTGCTTGCTCAAAAAGATGGATGTAGTTGTATCTGAT
ATTCGGGGTGTTGGTATACAGATTGGGAAATTAGATAAGAAGAACAGTGA
TTCTTTGGCTGGMTCAACCTCTGTTTTAATGTCTTTTATTAATAAAGTGA
ATCCTTTAGATACATCGTCATCATCTAAAGAACTATCAATCAATCAACAA
TCTCCTTCGAAAAATTGTAATCCTTCATATCCAAACTCTAAAGAACTATC
TAATGATCTGTCCCTATCGATGTCGCAGATTGATCAAAATGTATTTAAGT
CTCTACCTGAAGACATCAAAATGGAGATAGAGTTACAAATGAAAATTAAA
AAAAGTAATAAGTGTAACAATAAAGAACTCCCAAAGTCCAGGATCACCAA
AATGAATGACACTTCACGTCTATCTTATTCCCAACTAGATCAAGATGTGT
TGGCACAGTTACCCCAGGAATTACTTGAAGAAGTTAAAAATACATATGGA
TCGGGACCATCTACACGTAATTCATCTAAGACTGCTGATAATGCCTTCAA
GGTTTTAATGAGCCCTTCTAAATCCAAATCTCCTTTAAAAAAGAAAAGTC
CTGTCAAGCGTCGTGGACGAAAGCCCACTGTTGTCAGTCCAAAAAAACAA
CTCTTAGAAGAAAAGTTTTCCGTTGATTTAATGAAAAAAGAGGATTCATG
TAATGTTGAAGTAGTTCGGCAAAATGGAAGGCTGGAATTTTCATCTCCTC
CTCCACCATCAGATGCCGATCTAAATGGTGTAAGAGATCTTGAAGGAATT
AGAGAACTAATCTTTGAGTGGATTCGTTCCAGTGATTCCCCTACGCAAGA
TGACATCGAAACCGTTTCTTCCTTCTTTTTCATCAAGTTATCCGAATCTG
AATATGATTTTGTTCGATCGTTACTTCTACAACTACGACGTCTCACGTCC
ATAAAAGACGAGGATTCACCTTGGAGATCATTCTATCTTAATTTATATGA
AAAAGTACAAAGTATTATGATAAACAAAGAGGGACTTAAACTCTATGTAT
GA
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