EMLSAT00000009716, EMLSAT00000009716-705563 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009716
Unique NameEMLSAT00000009716-705563
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s627supercontigLSalAtl2s627:172122..174346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009716 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009716EMLSAG00000009716-692482Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000043099EMLSAE00000043099-752027Lepeophtheirus salmonisexon
EMLSAE00000043100EMLSAE00000043100-752028Lepeophtheirus salmonisexon
EMLSAE00000043101EMLSAE00000043101-752029Lepeophtheirus salmonisexon
EMLSAE00000043102EMLSAE00000043102-752030Lepeophtheirus salmonisexon
EMLSAE00000043103EMLSAE00000043103-752031Lepeophtheirus salmonisexon
EMLSAE00000043104EMLSAE00000043104-752032Lepeophtheirus salmonisexon
EMLSAE00000043105EMLSAE00000043105-752033Lepeophtheirus salmonisexon
EMLSAE00000043106EMLSAE00000043106-752034Lepeophtheirus salmonisexon
EMLSAE00000043107EMLSAE00000043107-752035Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773822auto773822Lepeophtheirus salmonispolypeptide
EMLSAP00000009716EMLSAP00000009716Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009716

>EMLSAP00000009716 ID=EMLSAP00000009716|Name=EMLSAP00000009716|organism=Lepeophtheirus salmonis|type=polypeptide|length=303bp
MILGEEMKRQLIPLLLLVLTINTIPCMAAAPKDARLISLLNVVTFQNSAC
AAASSTVSNPIQGTCFSAGECGAMGGRVDGTCASGFGACCVFTLTACTGS
IANNCTYIMNPGSPGICRIRLDFQNFVINTPMPDGTCPVEKFTVTSTSRN
NIPNFCGTLTNQHMYITTPTGPGDLGTLTINFDTTLMNANRRWNIKVTRI
HCSDTLSLPPDGCLQYFTGNSAIPDPFEISGGGPNVCLDAKLLISNGDPN
IICGQKFLNPTGKTSGQIIANTSPFILRLETKTPLKIAPPVTGFNLNYNQ
IPC
back to top

mRNA from alignment at LSalAtl2s627:172122..174346-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009716-705563 ID=EMLSAT00000009716-705563|Name=EMLSAT00000009716|organism=Lepeophtheirus salmonis|type=mRNA|length=2225bp|location=Sequence derived from alignment at LSalAtl2s627:172122..174346- (Lepeophtheirus salmonis)
ATGATTCTAGGAGAGGAGATGAAAAGGCAGCTGATCCCTTTACTACTCCT AGTTTTGACAATCAATACAATTCCATGCATGGCTGCAGCCCCGAAAGATG CACGTGAGTTTCCATTTAACCCATTTTTTACCCATTTTCTCACTCACTCC ATGATTCTTGTTTTTATTGTATGTAGGGTTGATTAGCTTATTGAACGTGG TAACGTTCCAAAATAGCGCATGTGCAGCCGCTTCCTCGACTGTTTCAAAC CCTATCCAAGGAACTTGCTTCTCCGCTGGTGAATGCGGAGCAATGGGGGG AAGAGTGGATGGMACATGTGCATCCGGATTTGGTGCTTGTTGTGTGTTTA CGTGAGTAGAGACAAAATCCTTAGATTTGAGTTTTATTCTGATTCACTTG CTAATCCATGAATATATGTAGACTAACAGCTTGTACGGGAAGTATCGCAA ATAATTGTACCTACATCATGAACCCTGGATCACCTGGTAACTTCAATGGA ATGGATAATATGTGTCGCTATACATTTGCACAAGGAAATGGAGGTAATCT TTTATATTTGTAGAGTTGTAGAAAGTATGACCTAAAACGCTTGCCAGATC TTTGTAGAAAGCAAAATATAAACTGTTAACCTATAAGTATGAAATAATAT CTAGTGCATCATGGACAAAGAGGATTTATTGGGAGTTATAAATTTAAGTC CCTCTTAGACTCAGAGTCGAATTGAGGATCGAAAACAGAGTAATCCCTAA TTACATTGCCCATCTTCTAGCTTCTCACTTGATCTATTGAGGGAGCATTC TTCAAATTATCAGAATTTTCACGTTAATTTTCGGTTTCATTTTTTTAGTT ATCTAGCAGCTCATATTTTTTACAGCTATAACTATGTTCGATTACATTTT TTTCATTAGTTAATTTTATTTTTTATTTTATTTAGGGATTTGTCGAATAA GGTAATAAGCCGTCTATGAGTTCTTCTTTATATATAGGTAGAATTCATAT CAATTATATTTCAGATTAGACTTTCAAAATTTTGTTATCAATACGCCAAT GCCAGATGGGACTTGTCCCGTTGAAAAGTTCACTGTGACCAGTACTTCCA GAAACAATATTCCAAATTTTTGTGGAACATTAACTAATCAACATAGTGAG AAAGAAATACATATCTTTAATACAAATTATATTTCGTTGTTTCTCTTCCT TCTTTTTTTTTTACATGTATGTATTAGTGTATATCACAACTCCAACAGGA CCTGGGGACCTAGGAACTCTCACAATCAACTTTGATACAACTCTAATGAA TGCCAACCGTCGATGGAATATCAAAGTCACGAGAATACATTGCTCTGATA CTCTCTCTCTGTAAGTTATTCCTTCCTTAAATCATATTTAGTCTTGTACA TTCAATTTCTCTTTATTTAGACCTCCTGATGGTTGTCTCCAATATTTTAC TGGAAATTCAGGTACTGTCAAGAATTATAACTTTGGAAAATTATTGGCAG CTCAGAGTTACAACAGCTGCATAAGACAGGAGAGAGGMAAGACAAATTTT AAGACAGCATATATACTTCCATAGGCACGTCTAGTAATCTCCTATTGTTG GGGTTTGGTCTGAAAATACTAGAGCAGTCTGATACCGTTATAGTTTTAAC GAATCCGTTCCAAATTCCGTATAGCAGTTCAAGTTAAATAAATCATTTTT TTATAAATCTAATTTTGAGTGGGGAAAATGACAGGAAATTTTGGTTTGGA CCGAATGTTGGTACAGATCTGTTAGGAAAATATTCCTTAAGACCAAACCG AATGACAAATTCGGTCTCGGACCGAGTCTCAACACTAGTATATACCTTTA AATATATTCATGAAATCGGTCTTTTATTTCCTTTGTAGATTTTTGCTCTC TTCAACTTACTGAGAGTAGTACAGCAATACCAGATCCTTTTGAAATCTCT GGGGGAGGTCCAAATGTTTGTCTGGATGCAAAGCTTCTGATTAGTAATGG AGATCCTAACATTATATGTGGACAAAAATTCCTAAATCCAACCGGAAAAA CTTCTGGTCAGATCATAGGTAAGTAAGAAATAATAACTTACCTTCACTCA TTCATATAACATTACTTGCAGCAAACACTTCTCCATTTATTCTTCGGCTT GAAACAAAGACTCCTTTAAAAATTGCTCCTCCTGTGACTGGCTTCAACTT GAATTACAATCAAATTCCATGTTAG
back to top
Add to Basket