EMLSAT00000009823, EMLSAT00000009823-705670 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009823
Unique NameEMLSAT00000009823-705670
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s639supercontigLSalAtl2s639:564648..566995 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009823 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009823EMLSAG00000009823-692589Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000043619EMLSAE00000043619-752547Lepeophtheirus salmonisexon
EMLSAE00000043620EMLSAE00000043620-752548Lepeophtheirus salmonisexon
EMLSAE00000043621EMLSAE00000043621-752549Lepeophtheirus salmonisexon
EMLSAE00000043622EMLSAE00000043622-752550Lepeophtheirus salmonisexon
EMLSAE00000043623EMLSAE00000043623-752551Lepeophtheirus salmonisexon
EMLSAE00000043624EMLSAE00000043624-752552Lepeophtheirus salmonisexon
EMLSAE00000043625EMLSAE00000043625-752553Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778618auto778618Lepeophtheirus salmonispolypeptide
EMLSAP00000009823EMLSAP00000009823Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009823

>EMLSAP00000009823 ID=EMLSAP00000009823|Name=EMLSAP00000009823|organism=Lepeophtheirus salmonis|type=polypeptide|length=461bp
MLLLLIFLLRIYDHLAKAEEIKGCTYPSGKRGYCVRPSKCTHGQKIQEQI
KRPALVSVTEAFSATFICEHGDYVCCLCSDVSVYRDIVPYDSCGCTDANT
CVPYNECPEFLSLIRLFASTRHLVNGAWYLVINSWRCDDHTVGNDAFRVC
CPSKYEQSYDDSSLRILNHPNRHILAPKSKCGRSRTPSIKSRIVGGRDAL
LGQFPAIANIGYERRHPKYGALLGIVYECGGVLIGERYVLTAAHCIEGIP
KGRRGPVTVRLGEYDLTKARDCSGGICAPEAQNFGVEEVVTHPNYTGHPN
LLNDIALIRLDKSYIENGFVNSICLPFEDNFERTYMGKTERPFIFVAGWG
ATDRRGRKFPKVLQYLELDIFPFDKCKDIYQSYGSNLSEGNTQLCAGGDM
GRDSCGGDSGSSLMLEDRSTGTWTTIGVVSFGPRRCGQKGVPAIYTKVDQ
FLNWILDNIYE
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mRNA from alignment at LSalAtl2s639:564648..566995+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009823-705670 ID=EMLSAT00000009823-705670|Name=EMLSAT00000009823|organism=Lepeophtheirus salmonis|type=mRNA|length=2348bp|location=Sequence derived from alignment at LSalAtl2s639:564648..566995+ (Lepeophtheirus salmonis)
AAGCCTTTTTGCTTTTCGTGATATAATTGATTGAGAAGAAGAAGACGCAT
TTTTGACATACATAAACTAACAAGTTACATCAGAATGTTACTGCTCCTTA
TCTTCCTACTCCGTATCTATGATCATCTTGCAAAAGCTGAAGAAATTAAA
GGCTGCACCTATCCCTCTGGAAAAAGAGGCTATTGTGTTAGACCATCAAA
GTGTACTCACGGACAGAAAATTCAGGAACAAATTAAGAGACCGGCTTTAG
TGAGTGTAACAGAAGCCTTTTCAGCAACATTCATTTGTGAACACGGGGAT
TACGTTTGCTGTCTTTGCTCTGATGTTTCAGTATATCGTGACATAGTGCC
ATATGGTAATTTAATTCTCAAAAGCTCAATGATGCTTTGTAAAGTTTGTT
CTTTCTCATTTCTAAAAGTGATATCTATATTCTACAACAATTCTATTTAT
TTTTTAAAGTAACTCGTAATATCGTTGTGAGGGATAGTTGAGAATCTTAT
TCCACGTAGTTATGGTAAAGTGACCCCCATTAATTCATATTACTCTTCTC
TCATAGATAGTTGTGGATGTACAGATGCAAATACCTGTGTCCCTTACAAT
GAATGTCCAGAATTTTTAAGTTTGATCCGTCTTTTTGCAAGTACAAGACA
TTTAGTAAACGGAGCTTGGTATCTAGTCATAAATTCATGGAGATGCGATG
ATCATACAGTGGGAAACGATGCTTTTAGAGTGTGTTGCCCTTCCAAATAT
GAACAAAGTTATGATGATAGGTACGATCAGCCAAAGACATTTTCATCGAT
GTTACAACGAACTCCGTATGTAATTTAGAAAAAGAAATATGAAGTACCGG
ATTGAATTTTTAGGAAGAGAGATCAATTTAAAAAAATCTTTTTTCAATAT
TCCTTACATTCTGTTTTAATTATATAATCAAACAAGTAAATTTTGAAATT
ACAGTTCACTGAGAATATTGAATCATCCAAACCGTCATATCCTAGCACCA
AAATCTAAATGTGGTAGAAGTAGGACTCCAAGTATAAAATCTCGAATCGT
CGGGGGAAGAGATGCCCTTCTAGGGCAATTTCCGGCTATAGCAAACATTG
GCTATGAAAGAAGACATCCAAAATATGGAGCTCTACTGGGTATAGTTTAT
GAATGTGGAGGGGTTTTGATTGGAGAACGGTACATTAATTTACTTATATT
ACATATTTATGTAATAATAAAATTAAATTTTCAAAGCTATGTTCTGACTG
CTGCTCACTGTATAGAGGGGATACCTAAAGGAAGGCGTGGCCCGTAAGCT
AATATCATTCTTTTATTGAATTAACCTTTTGTCTTGATATATTTTGAAAT
AGAGTAACTGTAAGGCTAGGAGAATATGATTTAACCAAAGCCAGAGATTG
CTCAGGAGGCATTTGTGCACCGGAGGCTCAAAATTTTGGAGTGGAAGAAG
TAGTTACTCATCCTAATTATACAGGACATCCTAATCTCTTGAACGATATT
GCTTTGATACGACTTGATAAGTCTTATATTGAAAACGGTATTAGGAATTA
ATGTGCTAAAATAGTTTAAATATAGAACTCCCTACATATATTAATTATTC
GTGTTTTAAAATTGCATTTACTATGAGGATAAATTTTATATATCTGAGAC
TAATATTAATCCCAGGTTTCGTTAATTCTATTTGCCTTCCGTTTGAAGAC
AACTTTGAAAGAACTTATATGGGAAAAACAGAACGACCCTTTATTTTTGT
AGCTGGTTGGGGTGCAACAGACAGAAGAGGTGAGTGAAAATATTAGATTA
ATTTATTTATAGCATATAAACTTAGTTAATTCAATAAAAATTACATACAC
TCATAATTTTACAAGGAAGAAAATTTCCAAAGGTTCTTCAGTATCTTGAA
CTTGATATTTTCCCATTTGATAAATGCAAGGACATATATCAAAGTTATGG
ATCGAATTTATCTGAAGGAAACACTCAACTTTGTGCAGGAGGGGATATGG
GTAGGGACTCATGTGGAGGAGATTCCGGCTCTTCTCTCATGCTCGAAGAT
CGATCCACTGGAACATGGACGACCATTGGAGTTGTTAGTTTCGGTCCTCG
AAGATGTGGACAAAAAGGTGTACCTGCTATTTATACTAAGGTGGATCAAT
TTTTGAACTGGATCCTTGATAATATATATGAATAATTGGGAATAATTCTC
TTGGAGACTAAAAAACCATAGTTATATTACATCTTTTGTTACATATCTGA
TCTTTAAACATATAGTTATAGGTATAGCATGTCAAGTAAAGCAATATTTA
TGTGTAATTTGTTTTTTTAAATAAATTTGAAAATACATATATTCTGTA
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