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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s63 | supercontig | LSalAtl2s63:1087945..1093491 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000009838 >EMLSAP00000009838 ID=EMLSAP00000009838|Name=EMLSAP00000009838|organism=Lepeophtheirus salmonis|type=polypeptide|length=467bp
MSNIYVQEPPTQGKVLLETSVGDIEIELWAKECPKASRNFIQLCLENYYN
KTKFFRVIRDFIVQGGDPTNTGNGGESVFEGGAFKDEFHSRLRFVRRGLV
AMANSDKKDTNGSQFFFTMGQTPELQNKHTIFGKIAGDTIYNAMKLQEGE
VEDETPVRPHKIYKTRVIHNPFPDVAPRKNFSSRDDKKKEKKAPESKMKA
XKDFKLLSFGDEAEEEEDDLEETLKKEVSKPSGKSSHDLLEDPKLLKSSI
KLENEDAESPERKLEETNEDTLISIRDKLKRKSIKKVIEIKSSSSEGESE
DEEVKEKRRRKEEIQKEIKELKKSMRTDKGPLKDNLDGDSNLDEDQETEE
EKKNEILKDFHLQQKKFKEIQSNLPKKKTVDREKLTMQLLEQFKTKLAQA
TEEEEPELKNEDDDSGWMSHKLMFKSDNPVLAKDASTKNDDWFDIYDPRN
PINKRRRGDGSTSKRRK back to topmRNA from alignment at LSalAtl2s63:1087945..1093491+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000009838-705685 ID=EMLSAT00000009838-705685|Name=EMLSAT00000009838|organism=Lepeophtheirus salmonis|type=mRNA|length=5547bp|location=Sequence derived from alignment at LSalAtl2s63:1087945..1093491+ (Lepeophtheirus salmonis)
TTGAAATTGATTATTTACTAAATTTGAGTTTGAGTCTCATATATTGGGTT
GGGCATCAAATTTAGTGAAGTTAATGGAAAGACAATGCAGCCTTTCCCCC
GATTTTCAATTCTAATGAGATACTTTCATGCCTCCGAGGCAGTTTCAGGG
AGTAAAAAGGACTATAAAGCTCTAAAAAAGCTTAACCGCCGCCGATTGGA
GAGCCACTACGAACGTATAGATTCATCCAACCCTTTCAAAACCAACATTG
GAGTCGCCAATTCCTTAAAGTTTATGGAATTGAATGAGAAGGATCCTGGT
TTTGAGACAGGAAGACTACTCCAGGGTCCAGAAGAGGAAGAGATTGAACG
TTTGGGAGATGAAGTGAGTGAAAAGCGACAAAGATCTGTGGACAAGCATT
ACAAGGTATATTTAAACTTTAAACCCTTGATCCACTCTCACTGACTAATC
CCCTACAACAATTATTTTTTCAGCAATTATTGGGTAAAAATGAGATAAAA
CACATTATGGAAATGAAAAAGTTATTCCCAAAGCCAAAGGATCCCAATTT
ACTTACATGGATTGAAAAAGAAACCATTCGATATTTGAATAAAATGGATC
CCAATACTTGGACACCTAAAGCACTCTCTGAGAGCTTCACCTCCGCAGAT
GAAATCGTCATCAAAAAAGTTCTCAAGTCCGGAGGTTTTATTCACCCAGA
CCGAGTAGATGAGCATGACAAGGAAGTATTTCTGAATTGGAAACTCTTGA
AAAAAGATCAGTTACCCATTCGGAGTGAATTGAAAGCACAAATACTTTCC
AACAATGGCTCCTTCCAACAGCCAAACGCCAAACTTTTACCTACAGATGT
GACAAGCCAAGTGATTGCAAATAACATTGAAAGATTTGCTCCTCTACCCA
GGAAGATAAAAAAAGGACCTTTTGGCTCAATTATATCCGAATATAAACAT
AAAACCAGGACTTTAGAACGAGAGAAAAAAGAAGATGAAGGAGATGTTCA
TATTTTACCAAATTTGTTTAAAAACGATCAATTAATATTTGACGAAGCTA
ATATAAASGAGCCTAGTCCATATAGAGAAACGGCACTATTAGATACTTCC
ATTAATTTATCGAAAGAACCTCACATGACGGCTAATGAGTTTAAAGAGGT
ATATTTCAAATCAAAGGCAAACAAGGAAAACATTGAACTCGTTCTTAAAT
CTGAAATAAATCCTATTAAAAGAAAATKCTTTCAATGGATTCAAGAAGAA
ACTGTCAAGTCTAGCCATGAATCAGAAGCTGTAAAGCTAGATGCAGATGA
AATAATCAAGGAAATAAAATGAATTTAGTCCTTTCTTTTGTAGTTTCCTC
TAATTAAAATACATTCTTTTGAAGTTTTGTTTTCTTTAAAGTGATATTAA
GTTCATTTTAAATCTTTTATATTATTTCAGATATGAGTAATATATACGTA
CAAGAGCCCCCAACTCAAGGAAAAGTCCTACTTGAAACATCTGTTGGGGA
CATTGAAATAGAACTATGGGCTAAAGAGTGTCCGAAAGCATCTAGAAACT
TTATACAACTCTGTCTCGAAAATTATTATAACAAAACAAAATTTTTTAGG
GTAATCAGAGACTTTATTGTTCAAGGCGGAGATCCGACCAATACTGGAAA
TGGTGGTGAATCTGTGTTTGAAGGAGGAGCATTCAAGGATGAATTTCATA
GTAGGCTGCGATTTGTTCGAAGGGGTCTCGTTGCAATGGCCAATTCAGAC
AAAAAGGATACGAATGGAAGTCAGTTTTTTTTTACTATGGGTCAAACCCC
TGAGTTACAAAATAAGCATACCATTTTTGGTAAGATCGCTGGTGATACCA
TTTATAATGCTATGAAGCTGCAAGAAGGAGAGGTCGAAGATGAAACTCCA
GTTCGACCCCACAAAATATACAAGACTCGAGTAATTCATAATCCATTCCC
TGATGTTGCTCCCCGCAAAAACTTTTCGTCAAGGGATGACAAAAAGAAGG
AAAAAAAAGCTCCAGAAAGTAAAATGAAGGCAGKTAAAGACTTTAAACTC
CTCTCATTTGGAGATGAAGCTGAGGAAGAAGAAGATGATCTTGAAGAAAC
CTTGAAAAAAGAAGTAAGCAAACCCTCTGGAAAGTCATCTCATGACTTAC
TTGAGGATCCAAAACTATTAAAATCTTCCATTAAATTGGAAAATGAAGAT
GCAGAGTCACCAGAAAGGAAGTTAGAGGAAACAAATGAAGATACTTTAAT
AAGCATACGTGATAAATTAAAAAGGAAATCCATTAAAAAAGTTATTGAAA
TTAAAAGTTCTTCCTCTGAGGGAGAGAGTGAGGACGAGGAAGTGAAAGAG
AAACGAAGGAGGAAGGAGGAGATTCAAAAGGAGATCAAGGAACTTAAAAA
GTCAATGAGAACTGACAAAGGGCCTTTAAAAGACAACCTCGACGGTGATT
CAAATTTAGATGAAGATCAGGAAACAGAAGAAGAAAAGAAAAATGAAATA
CTCAAGGACTTTCATCTTCAACAAAAGAAATTCAAAGAAATCCAATCTAA
TTTACCTAAAAAGAAAACTGTGGATCGAGAAAAACTGACTATGCAGCTCT
TGGAACAATTTAAGACAAAACTAGCCCAAGCAACAGAGGAGGAAGAGCCT
GAGCTGAAGAATGAAGATGACGACTCAGGCTGGATGTCGCACAAATTAAT
GTTCAAAAGTGACAATCCTGTTCTAGCTAAGGATGCTTCTACCAAGAACG
ATGATTGGTTCGACATCTATGATCCAAGAAATCCTATAAATAAAAGAAGA
AGGGGGGACGGATCCACTTCAAAAAGAAGAAAATAACTTTTTTTTAATAT
GTTTTTAAATAATGGCACCTTTTTGAATTCAAGGTCACGATCAACTTTCA
TTTTGATTTGTTCTCATTGAATACTTAAAGGAATATTGCACTAAAAGAGT
TTTATGATTATTGATCTTTCATTTATTTTGCCATTTTATGATATGAAATA
TTATTACATATGTTTGTATATCATATGTACATTATGACATTAACAATACA
AATCAGGTTTTGTCACATTTAGTACAAGTTAAAGGCATTCCCTGCGCGCG
TATATGTATAAGAAAAGCTTCTGTCAAAGAATTTACATAATATACGAAAC
CATTTGTACCTTCTTCCTTCAACGTGTACTCTTACTTTTTATGTAGTCCA
ACATTGAGGAGTGTCATGTTTCATATCTTTGAAACAACTCTCCGATGCTT
TAATCGAGGAAGCTATAGGAAGAGGCGCCTCATATTCACTAACAAATACG
TTGCTGGCCGAGGACGAAAATCCTACTGTTTCTTCACAGTTTTAGTGGGA
TGTATCTTTTGGATCCTTTTTATCAATAAAAAGTACCTTATGAAGAATTT
TTTAGAGGATGATTGGTGGTCGGGTTCACCGATATGGGACGAAGATAAAA
AACCACATCTAAATCCACACGTTTTTCAATTTCTCCTGGATTCACCAACA
ATTTGCTCCAAGAATGAGAATGTAGATTTATTAGTCATGGTTTCTTCTGC
TTATCATCACTTGGATCGACGTGATGCAATTCGTAATTCATGGGGATCGA
AGAAGTGGAGAGAACCACGAAATATTAAGGTTGTGTTTTTATTAGGACAT
GTCACAAATAAACAATCCGATATATATGTAGAAAACAACAAAAACAATGA
TATCATTCAGGAGGATTTTAAGGTTGGTATAAAGTATATGAAATGTACAT
ATATTATAATCTGAGAATTTTAAGAGAATCATATTAGTGTATACAATTCA
CAGTTATATATACTCGTATTATGTAGGTAAATAGGTTAAAATGTCTTATT
CTTGAATAAAATACATATCAAACATAACATGCTTCTTAGAGCAGATGAAC
GAATGATAAGTGAAGCTTTGAAAATAATTAAATCTTACCTCAGCTATGTT
AAAGAGTTGATTCGTCGTTTCCCTCCTCTATTAAAACCGTTTTTCTTACA
TTATTATAATTAATTTGATAGGATACTTACTACAATTTGACTCTAAAGAC
AGTCATGGGCCTCAAATGGACATCGATTTATTGTCCCCAAGCAAAATTTG
TACTAAAAACGGATGATGATATGTTTATTAGCATTCCAACTCTTCATACA
GCCTTACAGAAGGATCTTCATTTTGATAAACACATTGTTGGTAAGTGAAA
TTCAACAATATTTGAAGAAGTTCAATGTTTATTTTTTTTCGATTGAAAAA
TATTATTTAGGTTGTATAAAAAATAATCCAGAAACAGCTCCTCAACCAAT
TCCCTCTTCTTCCAAATTTCAATCTTTACCACATGCACATCCTCTATTTG
TGGCTGGTGCAGGATACATGTTACCTGGTCAAGGATTAATTCGTGATTTG
TACTACGCATCCCTTAGAACAAGGTTTTTTGCAATTGAAGATGTTTTCAC
CACAGCTCATGTTGCATCCCGCATTGGGCTTCATCCTCCAGTGCATGACT
CTAGATTTTCATGCGGAGAGATGAGTCCGATCAACTATGAAAAATTAGAC
TTTGTACAGAATTGTAAAAGACTTAAATACAAATTTACAGAGCACAAAGT
CAAGCCAGAGGATATGAATAGTCTTTACAGTATTTTAAATAGTAATGATT
GTATGGATATGGAAGTMCGATGATTTATTTGAACCATTGCATTGTCCCGT
TAATGTTCTTTTTTTGTCAGATGGGATACAGAAATTTAACGTAGATTATT
TTTTGTATTTCAATTTGCTTTTATTTAAAATGNCAAATATTTTTCATTTG
GTAGATTATATTCAAATCAAGATTCAAATTATAAGAATCAATGCTTTAAA
AAATATGTATGCACAATTTGGTATCTACAGCCATTCTCTAAAATGTTTTA
TGTATATAAAATGTTTATACCATGAATACTCTGTTTAATACTTTTTTTTT
TTGATGTACGTATATTAAAAAACGACAGTGTATTACGRCGACATGGTATT
ATTTATTATATCCATACAATTTCAGTATAGATCATCGTTTGAATTGTTTT
ACCAACCTTAATGATGAGGAACTCCATTTAATACTCTAAAACCTTGAAAA
TTATTCCGAATGTCCGTTTAATTAAAAAAATTTTTAGTCTCTTTATTCTT
AATAGTTTATTTGTTCGTTTTATTTTGAAGTAAAGTGATCAAATAATATG
TAATGTGCCAACAACGTGAATTTTATATATACCCTGAAGATATTTTGATG
TTTGTCAGTACTTAATAAATAACTTATTATTTTGTATTTTTATCCAAGTG
TGACCTGTAGGCCATAGATACCTATAGATTGCTTAAGGGCGCTGTCGTCG
AAGCATTTCATGTCAGCTATTGTCGGGGGCAGATAATCAATCAAATTTAT
TATTATAANNGAAAGAGTACATTAAGTGATCATGCAATACTTTATACTTT
TAAATTAGAGGGATTACTATACAGATAGATAATGTTTTTTGATTATTACC
ATTCTCGTTGTTATATTCTCTATGGTGTGAACTTAGACCTAATACCT back to top
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