EMLSAT00000009876, EMLSAT00000009876-705723 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009876
Unique NameEMLSAT00000009876-705723
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s642supercontigLSalAtl2s642:301507..302282 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009876 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009876EMLSAG00000009876-692642Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000043904EMLSAE00000043904-752832Lepeophtheirus salmonisexon
EMLSAE00000043905EMLSAE00000043905-752833Lepeophtheirus salmonisexon
EMLSAE00000043906EMLSAE00000043906-752834Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776079auto776079Lepeophtheirus salmonispolypeptide
EMLSAP00000009876EMLSAP00000009876Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009876

>EMLSAP00000009876 ID=EMLSAP00000009876|Name=EMLSAP00000009876|organism=Lepeophtheirus salmonis|type=polypeptide|length=221bp
MKLFFIFVSLGXVVGEFSXEWTLWKKLHGKRYASFQIEELDSKCYKENRI
KIQKHNAEAQNGFHTHTLAMNKFGDLLQSEFLQGYTGLAKGSFSGDNTVI
LENSAPVPSYINWTKNGAVTEVKDQGGCGSCWAFSTSGTVEGQYFTKNKK
LLSFSEQQLVDCSSDFGNKGCNGXLMDNAFNYLIANKGIATEKXYPYIGD
EEKCSYNKTLAAXXXHLFQRR
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mRNA from alignment at LSalAtl2s642:301507..302282+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009876-705723 ID=EMLSAT00000009876-705723|Name=EMLSAT00000009876|organism=Lepeophtheirus salmonis|type=mRNA|length=776bp|location=Sequence derived from alignment at LSalAtl2s642:301507..302282+ (Lepeophtheirus salmonis)
ATGAAACTATTTTTTATTTTTGTYTCCCTTGGASTTGTGGTTGGAGAATT
CTCCKGTGAATGGACTCTATGGAAGAAACTTCACGGAAAAAGATATGCTT
CTTTCCAAATTGAAGAACTAGATTCAAAATGTTACAAAGAAAACAGAATC
AAAATCCAAAAGCATAATGCAGAAGCCCAAAATGGATTTCACACTCATAC
TTTGGCAATGAACAAATTTGGAGATTTAGTAAACGATTATCCACATTCTC
CATTGATTGAAAATATCTACTTTACATTTACAGCTTCAAAGTGAATTTCT
TCAAGGATATACTGGATTGGCCAAAGGATCCTTTTCAGGAGATAACACTG
TTATTTTAGAAAACAGCGCGCCTGTTCCTTCTTATATTAATTGGACGAAA
AATGGAGCAGTTACAGAAGTCAAAGACCAAGGAGGGTGTGGATCATGTTG
GGCTTTTTCGACTGTCTGTATTTTAATAAAGATCTGGAATCTTTAATATG
GATATCTTTAAATTTCAGTCTGGCACTGTAGAGGGACAATATTTCACCAA
AAACAAGAAGCTTCTTTCATTCAGTGAGCAACAATTGGTGGATTGCTCCT
CAGATTTTGGAAATAAGGGATGTAATGGTGYATTGATGGATAATGCCTTC
AATTATCTTATTGCTAATAAAGGWATAGCWACAGAGAAAAAMTATCCATA
TATAGGAGATGAAGAAAAATGTAGTTATAATAAAACATTGGCGGCACANN
NNNNTCACCTCTTTCAAAGACGTTAA
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