EMLSAT00000009878, EMLSAT00000009878-705725 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009878
Unique NameEMLSAT00000009878-705725
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s642supercontigLSalAtl2s642:322542..323700 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009878 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009878EMLSAG00000009878-692644Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000043908EMLSAE00000043908-752836Lepeophtheirus salmonisexon
EMLSAE00000043909EMLSAE00000043909-752837Lepeophtheirus salmonisexon
EMLSAE00000043910EMLSAE00000043910-752838Lepeophtheirus salmonisexon
EMLSAE00000043911EMLSAE00000043911-752839Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776369auto776369Lepeophtheirus salmonispolypeptide
EMLSAP00000009878EMLSAP00000009878Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009878

>EMLSAP00000009878 ID=EMLSAP00000009878|Name=EMLSAP00000009878|organism=Lepeophtheirus salmonis|type=polypeptide|length=325bp
MKLFLIFVSLGLVAGELSGEWTLWTKLHGKTYTSFEIEELRFKIFEENRI
KIQKHNAEAQNGLHTYSLEMNQYGDLLQSEFLQGYTGLAKGSYSGDNTVI
LDNSAPVPSYVNWTKNGAVTAXKNQEACGSCWAFSTTGSVEGQYFIKNKK
LLSFSEQQLVDCSSDFRNEGCNGGWMDNAFKYLIANKGIATEDTYPYTAT
DGVCVYNKTMAAGRISSFKDVKHGSEDQLKLAVAQIGPISVAIDASSGDF
QFYKKGVYVDEECSSKYLDHGVLAVGYGTDKGTGLDYWLXKNSXSASWGD
QGYIKMARNHKNMCGIASLASYPVI
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mRNA from alignment at LSalAtl2s642:322542..323700-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009878-705725 ID=EMLSAT00000009878-705725|Name=EMLSAT00000009878|organism=Lepeophtheirus salmonis|type=mRNA|length=1159bp|location=Sequence derived from alignment at LSalAtl2s642:322542..323700- (Lepeophtheirus salmonis)
ATGAAACTATTTTTAATTTTTGTGTCCCTTGGACTTGTAGCTGGAGAATT
ATCCGGTGAATGGACTCTATGGACGAAACTTCACGGAAAGACATATACTT
CTTTCGAAATTGAAGAACTTAGATTCAAAATTTTTGAAGAAAACAGAATC
AAAATCCAAAAGCATAATGCAGAAGCTCAAAACGGACTTCACACTTACAG
TTTAGAAATGAATCAATACGGAGATTTGGTAAACGTTTCTTCCCATATTT
AATTTAGTGAAAATATCTACTTTACATTTACAGCTTCAAAGTGAATTTCT
TCAAGGATATACTGGATTAGCCAAAGGTTCCTATTCAGGAGATAACACTG
TTATTTTGGACAACAGCGCACCGGTTCCTTCTTATGTTAATTGGACCAAA
AATGGAGCAGTTACGGCAGKCAAAAACCAAGAAGCTTGTGGATCATGTTG
GGCTTTTTCGACTGTATGTATTTGAACAAAAGATCTGGAATCTTTAAATA
TGTGTAGCTTTAAATTTCAGACTGGCTCTGTAGAGGGACAATATTTCATC
AAAAACAAGAAGCTTCTTTCCTTCAGTGAGCAACAATTGGTGGATTGCTC
CTCAGATTTTAGAAATGAGGGATGTAATGGTGGATGGATGGATAATGCCT
TCAAATATCTTATTGCTAATAAAGGTATAGCTACAGAGGACACATATCCA
TATACAGCAACAGATGGCGTCTGTGTTTATAATAAAACAATGGCAGCAGG
ACGAATTAGCTCTTTCAAAGACGTTAAACATGGAAGCGAAGACCAATTAA
AATTGGCTGTTGCCCAAATCGGTCCAATTTCTGTTGCCATTGATGCCTCA
TCTGGCGATTTCCAATTTTATAAAAAAGGTGAATTATCACTAGTTGATTA
GTTTTTTCTTAATTGTACGCTTATTGAGAGTAATATTTTATCGATAGGTG
TTTATGTAGATGAAGAATGTAGTTCTAAGTATTTGGACCACGGTGTTTTG
GCTGTTGGTTATGGCACGGATAAGGGAACGGGATTGGATTATTGGCTTKT
CAAAAATTCATKGTCTGCATCTTGGGGAGATCAAGGATACATCAAAATGG
CCAGGAATCATAAGAACATGTGTGGCATTGCATCACTGGCTTCATATCCC
GTCATTTAA
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