EMLSAT00000009894, EMLSAT00000009894-705741 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009894
Unique NameEMLSAT00000009894-705741
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s643supercontigLSalAtl2s643:527852..528501 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009894 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009894EMLSAG00000009894-692660Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000043987EMLSAE00000043987-752915Lepeophtheirus salmonisexon
EMLSAE00000043988EMLSAE00000043988-752916Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778391auto778391Lepeophtheirus salmonispolypeptide
EMLSAP00000009894EMLSAP00000009894Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009894

>EMLSAP00000009894 ID=EMLSAP00000009894|Name=EMLSAP00000009894|organism=Lepeophtheirus salmonis|type=polypeptide|length=171bp
MNHPPYLLHIPRPTRQFITVSHSDVYINSLIPYVSNHQSTPNIITNMKTF
VALSALLALALADHPAPXQPAPAPYQPAPSYNEVPAAYQYQYAVKDDYSG
VNFGADETRDGYATKGSYTVALPDGRLQTVTYSVTDAYSGYVADVTYSGE
PKYAPYKPAPAPYKPAPVYHA
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mRNA from alignment at LSalAtl2s643:527852..528501+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009894-705741 ID=EMLSAT00000009894-705741|Name=EMLSAT00000009894|organism=Lepeophtheirus salmonis|type=mRNA|length=650bp|location=Sequence derived from alignment at LSalAtl2s643:527852..528501+ (Lepeophtheirus salmonis)
GAGTAATGAACCATCCCCCTTATCTTCTTCACATTCCACGCCCAACGAGA
CAGTTTATAACTGTATCACACTCTGATGTATATATAAATAGCCTAATCCC
TTACGTTTCCAATCATCAGTCCACTCCAAACATCATCACGAATATGAAGG
TAATAAATTTAAAAATATATGTATTTATTTCAATTCATTCATTTAATTAT
TACATTCCAGACCTTCGTTGCCTTATCCGCTCTCTTGGCTCTTGCTCTTG
CTGACCACCCAGCTCCCTKCCARCCAGCCCCTGCRCCCTATCAACCAGCT
CCTTCCTACAATGAAGTCCCAGCTGCCTACCAATACCAATATGCTGTCAA
GGATGACTACTCTGGAGTCAACTTTGGAGCTGATGAGACCCGTGATGGAT
ATGCCACCAAGGGATCTTACACCGTTGCTCTCCCCGATGGTCGTCTCCAA
ACTGTAACCTACTCCGTGACTGATGCCTACTCTGGCTATGTTGCTGATGT
TACCTACTCTGGAGAACCCAAATATGCCCCCTACAAGCCTGCTCCTGCTC
CCTACAAGCCAGCTCCCGTTTATCATGCCTAAGAACCAATCATTCTATCC
CCATTTCTTGGTTTTAAATTGTTATATTTATCTATTTATTAAAATAAAAC
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