EMLSAT00000009970, EMLSAT00000009970-705817 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009970
Unique NameEMLSAT00000009970-705817
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s651supercontigLSalAtl2s651:156413..157627 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009970 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009970EMLSAG00000009970-692736Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000044342EMLSAE00000044342-753270Lepeophtheirus salmonisexon
EMLSAE00000044343EMLSAE00000044343-753271Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773474auto773474Lepeophtheirus salmonispolypeptide
EMLSAP00000009970EMLSAP00000009970Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009970

>EMLSAP00000009970 ID=EMLSAP00000009970|Name=EMLSAP00000009970|organism=Lepeophtheirus salmonis|type=polypeptide|length=336bp
MGSLERLCLRWNEYESNFKQGFSDLRQNEELFDVTIISGSKIIKAHKVIL
CACSPVFRSIIGSAPVQTYPLIYLRGINFYYLELLLSFMYYGEVSVDKEE
LDDFISIAQEFQIKGLSNYSTPLKRCESQPSTSSTVSTDLTPYPPHDSQD
LSIVRDDINDSLTKSLPNIEKEECNIVDESNTLEFTQNASEQMERNNDSH
DISIVRDDLNNSLSKSLTNSENEECYGSEQMETNNDASECILLEQNQDYD
EALNTEIIQYYSKQKTGKGYQCKKCNYKAQTRHLLHNHVEARHIVTKGFI
CSICEKKYKTRQSLYLHKYRTHKGXSVVFEGPKVIR
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mRNA from alignment at LSalAtl2s651:156413..157627-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009970-705817 ID=EMLSAT00000009970-705817|Name=EMLSAT00000009970|organism=Lepeophtheirus salmonis|type=mRNA|length=1215bp|location=Sequence derived from alignment at LSalAtl2s651:156413..157627- (Lepeophtheirus salmonis)
ATGGGATCTCTTGAACGCCTTTGTTTGCGATGGAACGAGTATGAATCGAA
TTTCAAGCAAGGTTTTTCGGATCTCCGTCAAAATGAGGAACTTTTTGATG
TGACGATCATCTCTGGATCAAAGATCATCAAGGCTCACAAGGTCATTCTA
TGTGCATGTTCTCCTGTATTTCGTTCCATCATTGGATCTGCACCCGTCCA
GACATATCCCCTGATTTATTTGAGAGGGATCAACTTTTATTATCTGGAGC
TACTCCTTTCCTTTATGTATTACGGGGAAGTGAGTGTGGATAAAGAGGAA
CTCGATGATTTCATTTCCATTGCTCAAGAGTTTCAAATCAAGGGTCTCTC
AAATTATTCTACTCCCCTAAAAAGATGTGAATCTCAGCCCTCTACCTCCT
CCACTGTTTCAACTGATCTCACTCCATATCCACCTCATGATTCTCAGGAT
CTTTCCATCGTAAGGGATGATATAAACGATTCCCTCACCAAATCTTTACC
TAATATAGAAAAAGAAGAATGTAATATTGTGGATGAGAGCAATACTTTAG
AATTTACGCAAAATGCATCAGAACAAATGGAAAGGAATAATGATTCCCAT
GATATTTCCATTGTAAGGGATGATTTAAACAATTCCCTCTCTAAATCTTT
GACTAATTCAGAAAATGAAGAATGTTATGGATCTGAACAAATGGAAACGA
ATAATGATGCTTCAGAATGTATTTTATTAGAACAAAACCAAGGTTTGTAT
TTCTTTTATTAACAAACAGAGGTGGAAAAAGTCCTTATAAATATAATACT
TCAAGTCCTCGGAAAATGAGATGTAATTCATAGACTATTGTAATTTTAAA
ATATGGACTCACTCAAGTTGAGTACAAGTACTTCCGTTTAATAGTAATTG
AATAATGTTTCAATTGAATTAATATTTGTTATTTTTTAAATTCCAGACTA
TGATGAAGCCTTAAATACAGAGATTATTCAGTACTACTCCAAGCAAAAAA
CGGGAAAGGGATATCAATGCAAAAAATGTAACTATAAGGCTCAAACGCGA
CATCTTTTGCATAATCATGTTGAGGCCAGACACATAGTTACAAAGGGTTT
TATTTGCTCCATCTGCGAGAAAAAATACAAAACAAGACAAAGTCTCTACT
TACACAAGTACAGAACACATAAAGGTSATAGCGTCGTTTTTGAAGGTCCC
AAAGTTATTAGATGA
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