EMLSAT00000010038, EMLSAT00000010038-705885 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000010038
Unique Name	EMLSAT00000010038-705885
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s661	supercontig	LSalAtl2s661:130915..135485 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000010038 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000010038	EMLSAG00000010038-692804	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000044648	EMLSAE00000044648-753576	Lepeophtheirus salmonis	exon
EMLSAE00000044649	EMLSAE00000044649-753577	Lepeophtheirus salmonis	exon
EMLSAE00000044650	EMLSAE00000044650-753578	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto772909	auto772909	Lepeophtheirus salmonis	polypeptide
EMLSAP00000010038	EMLSAP00000010038	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s661:130915..135485+

protein sequence of EMLSAP00000010038

>EMLSAP00000010038 ID=EMLSAP00000010038|Name=EMLSAP00000010038|organism=Lepeophtheirus salmonis|type=polypeptide|length=439bp
MTTKSWNVRIGLVLGLSFLLALCIRGLSSSFMGGNNFWIYRLLDNLSAYQ
LFLFPGGVLLLYLRKVHYFENSGNVNARLHKCLQIIFVGIKDLLPTQEGS
KSSSPSSKTPVSQKSKIITLLYCVVGLQVSYLTWGYLQERIMTRDYYDST
GKMKRFSDSQFLVFVNRILGFSLAILYLAFHSRGNPSGAPVYKYSYCSFT
NIMSSWCQYEALKFVSFPTQVLSKACKVIPVMIMGRIVSNKKYEYYEYVV
ACMLSFGMILFLFGTPSNGKETSANTTVSGAILLIAYMAFDAFTSNWQGE
LFTSYKMNSIEMMGGVNFFSCLLTSTSLLSQGAFYDSLVFMSQFPSFAFD
CVVLSVCSATGQLFIYHTISQFGPLIFAIIMTLRQSLAILISCFVFKHPL
NSLGIVGILIVFSAIFVKIYCGHRLRQLKKQAATIQRTT

mRNA from alignment at LSalAtl2s661:130915..135485+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000010038-705885 ID=EMLSAT00000010038-705885|Name=EMLSAT00000010038|organism=Lepeophtheirus salmonis|type=mRNA|length=4571bp|location=Sequence derived from alignment at LSalAtl2s661:130915..135485+ (Lepeophtheirus salmonis)
AAAAAAATGAATGAATATTTTATATAAATTACACCACTTATCAGAAACAT
GACAAGGTGCTGTTTTAAGCTACTAAATCCTCGTCGATTTCGGTCACTGT
TATTGACTATTTCATTACTGTGATAAGTAAAATAAAACCATCAAAATAAT
TATTTAATGATATATTGAATAACATTAGCTAGTGATATACAACACAATAT
TAGGTAATGACGGAATGAATGAATTAAGTAGTGATCTGTTTTTGCAAGAG
GCATCCTCTGCGGTATGAGTTATGACGTCATGAGTACGTGACTTGAGAAG
TGAAAGACGCTTACAGAAGTTAACTGCTACAACTATAGAAAGGTATTCAT
TCTGACTTTTTGAGTCTTTGTCCATTCTCCCGATTGAGTTGGAGTGAGCG
TAAGTTTCTGAGCAAGTGTTCTGATTGAATCATTATTAACAAATGGCAAT
ATACTAGTAATAGACCACCAAGTTCATATGTTTCGAATGATTAGCTCATT
CTGAACTGGAGAGGAATGACAACGAAATCTTGGAACGTTCGTATTGGGCT
TGTACTTGGACTCTCTTTCCTCCTTGCCCTATGCATTCGAGGCCTTTCCT
CGTCATTTATGGGTGGAAATAATTTTTGGATCTATCGACTCTTGGATAAT
CTCTCTGCATATCAATTATTCCTCTTTCCTGGAGGTGTACTCCTTCTTTA
TTTGAGAAAGGTCCATTATTTTGAGAATTCGGGGAACGTCAATGCTCGAC
TTCATAAATGTCTTCAGATCATCTTTGTCGGAATCAAGGATTTGCTGCCT
ACTCAAGAAGGAAGCAAATCATCTTCACCATCGTCTAAAACTCCCGTTTC
ACAAAAGAGTAAAATAATAACCTTGCTCTATTGTGTTGTGGGACTTCAAG
TTTCTTATTTGACATGGGGATATCTTCAGGTATGTTTTATCTAGAGTGTT
CTGGCTAAATGCTTTAACTCTTTTTAGTCTTTTTTTAATAACCCCCTACA
CGCTTGTAAAAACATTATTGCTGTTCAATATTCTTTGATGTCTATATTTA
TCGATTTTGAGAGCTTCAAAAAAATGTGTCTGGCCGTTTTTGAGGAAATA
GATATTTAATATTCGATATTCCATTTTTTAATAGGCTCAAAAATTAAGAT
TTAAGGGGACGGCAACGCAAGGTTTGCGAAATATAAATTTGGAAAAGATG
AGTTCATTCCCTAGAATGGAGATAATAAGTAAAAAAAGTTTTAAAAAGGA
ATAGAAATGGCATTAAAAGTATTGCTATTTATACAAAAATGAGTTTCTTA
TTTCTTATTCATTCTAAAATTGTGCTGTTCCATAAAGATAATTAGATCGG
TGCACGCTATACGCATTACACGTAAAGTATAGTTCTTATCCTTTTTAGAT
TAAGAAGGATCCATTTTTGATTTATAAAATAATTAATWTATATATATMTA
GTTCTACAAAACTTATTCTTTCAAAAAGTCAATTTGACATCACTGTATTT
TATAAATAAAAAAATTACTTATTAACAAAAGNTAACTAATTTTCCCTTGA
AAATATAAACTAAAATGTATTTAATAATATTGCAGTAGTACACTTATGAT
TTTATCAATCAAGCGCGGACTTACAACTCCMAAWTTTTTTTTTTTTTTTT
GGRGCCTATTAGAAAATGGAAAATTGGACAAAATAGACCGAAACATTTTC
TTGAAAATCTCAAAATCAATTAATATAAACATTCAGGAATAATAGACAGC
TTTCAAAAGTGTTGGGAACGATTTCGATTTAAAAAAAGTTATGTTTTTAC
TAGCATGTATACATATATATATATTAAGTCATAAAAAATGATTTAATTGA
ACATCTTAATTTCTTTTGATGTAACTTAATTTACTAGATAAGAGTTAAAG
CGTTTATACTTCTGTCTAATTATAGGAACGAATAATGACACGAGATTACT
ATGATTCCACGGGGAAAATGAAACGATTCTCAGATTCTCAATTCCTCGTT
TTTGTCAATAGAATCCTGGGCTTCTCCCTTGCCATTCTCTATTTAGCATT
TCATTCACGAGGTAATCCATCCGGAGCTCCAGTCTATAAGTATTCTTACT
GTTCTTTTACCAACATCATGAGTAGTTGGTGCCAGTACGAAGCCCTTAAG
TTCGTATCCTTTCCGACTCAAGTTCTCTCAAAGGCCTGTAAAGTCATTCC
AGTTATGATAATGGGACGCATTGTCTCTAATAAGAAGTATGAGTATTATG
AATATGTTGTAGCATGCATGCTATCATTTGGTATGATTCTATTCTTATTT
GGAACTCCAAGCAATGGAAAAGAAACGAGTGCTAACACAACTGTATCTGG
AGCAATTCTTCTCATCGCTTACATGGCCTTTGATGCATTTACATCCAATT
GGCAGGGKGAGCTCTTTACGTCTTACAAAATGAATTCAATTGAGATGATG
GGAGGAGTTAATTTCTTCTCTTGCCTACTTACATCAACCTCACTTCTTAG
CCAAGGAGCATTTTACGACTCCCTGGTCTTTATGTCACAATTCCCATCTT
TTGCGTTTGATTGTGTTGTTCTATCTGTTTGCTCTGCAACGGGACAGCTT
TTTATTTATCATACAATTTCTCAATTTGGTCCCCTCATTTTTGCTATTAT
CATGACACTCAGACAATCTTTGGCTATATTAATATCCTGTTTTGTATTCA
AACATCCATTGAATTCTCTGGGTATTGTTGGGATTCTCATTGTTTTCTCT
GCTATATTTGTCAAAATCTATTGTGGACACCGACTGAGACAACTAAAGAA
ACAGGCCGCTACAATACAGAGAACTACTTAATTACTTTATATTTTAATTG
ATAGATTTATCACAAGTGTTATGAATAATGTCTTTGTACTGGGTACAGTT
TATTTTGTTATGAATACTACGCGTAGCTCCAATTTTTTTCTTTTACGTAC
TGATCATTTTTAACTATTATTTGAGTCGCAAATAAATACACAAGTTTATT
ATATACATTATACATACTTATTATAATATATAGTCTTTCAGTCACGTTTT
TAGTACTTTCACATACCTTGATAGGTTTCCTCTGAAACAAATAATTTTTT
AATGTACATTGTACATAGATACACTTATCAAAATAACTACATTAGCAGGG
GAAAACTACGTAAATTCTTAAAAATAAATATATTTCATCATAAAATATAT
AATATATATATATATATATACTCGATACTTATTCAATAAACAAAACTTGG
TAACATTATCATTATTAAAATAAAGATTCTTTTACGGGACGACTGTAGGT
AATCTAAAAAATTAGAATAGAGCTTAAATATGTACTTAACTATCTAAAAA
AATATATATGGACACAGTAACCAATAGATTTGCCATTAAAACACAGCACC
AAATAATATTAACAAAAATAGAATTATATAAAGAGGGGGAATTGATGTTT
ACGTCGTCATTATTTGGGTCCGTAGGAACCAACAGGAAGACGACTAAATC
CTGGAGCAGGTAATCCCTGAGATGATTTAGACTTTAATCCACTAGTATTT
GTTGAGGTTAAGGGATAGTTTCTTGGTGATGGTATCGTCTTATTCCAAAA
TTGCTGCTGTTTTGGTATAGACCCATTACTCATTGGATAATGTGCAGACT
TTCTTCGATTGACGAAAGATTGTTGTTGTTGTAATTGACGAGAATCAATA
TTGTTTCTTCTTGGTATGTCTGTTGATGAATATCTGAGAGAGTTACTCAC
AGAGGTCTGAACTTTTAATCTGGACTCTTTCGGAGTAATTGGACTTGGAC
TCCTTGACTCTCTATGAAGTGATACACTACTGTTTCCTCCATATCGAAAT
CCTTCAACTTTTTTTATTCGAGGAGTTGTATTAAACGAGGAAGAGCTAGC
CGGCGGTGATGAAAATCGACTTTCGGTATTGGGACTATAATCATCACTTC
GATCAAGGATACATTCTGCAGAAAGAGATTTTCCCTGAGAATTTGTTGAA
GGGAATCTTCTAGACTCATATCTCATACCCAATTGATTATAGGCCCGAAT
GGTTGGAGAAGACTCTTGTTGGGAGAGAGGGCGKCTATTCATGGTAGTTG
TTGGAGGRTTTCTATATTTTGGAGGAGGGACACGGGAAAATTTTGGCACG
TAAGTTGTGGTAGCATTAATGTTATTATTCATGACAGTATTAGCTGTATT
ATTAGAAGTGGACATTCCTGTATTTGAAGTAGAATAATGTGGGATTGAAG
AGTTCTTTGTGATGGGTGAGGGTGGAGGAATGGATTTTGATCTCAAACTC
TGGGGCTGATGGTAATGTGTCCCTCGTTTTAAGGGAGAGTTATTGTTTGA
AGCATTATTATACTTCAAGGATGGAACAGGAAGAGATCTTTGATGCGAAG
CTGTTGTGTTTGTGTTCGAAGTAGTTGATACCGTTGTCGTCGAACTTAAT
GGCTTKACAAWGAGATTTKTTGCAGTAACTAATTTCGCCTTTTGGGAAGT
GGTACATGTTGATGTCGTCAAGGGTGGTACATAAGTCACCATGTCTTCCT
CTACAACTTCTTGATTATGTT

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