EMLSAT00000010092, EMLSAT00000010092-705939 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000010092
Unique Name	EMLSAT00000010092-705939
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s664	supercontig	LSalAtl2s664:269628..274666 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000010092 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000010092	EMLSAG00000010092-692858	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000044861	EMLSAE00000044861-753789	Lepeophtheirus salmonis	exon
EMLSAE00000044862	EMLSAE00000044862-753790	Lepeophtheirus salmonis	exon
EMLSAE00000044863	EMLSAE00000044863-753791	Lepeophtheirus salmonis	exon
EMLSAE00000044864	EMLSAE00000044864-753792	Lepeophtheirus salmonis	exon
EMLSAE00000044865	EMLSAE00000044865-753793	Lepeophtheirus salmonis	exon
EMLSAE00000044866	EMLSAE00000044866-753794	Lepeophtheirus salmonis	exon
EMLSAE00000044867	EMLSAE00000044867-753795	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto775611	auto775611	Lepeophtheirus salmonis	polypeptide
EMLSAP00000010092	EMLSAP00000010092	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s664:269628..274666+

protein sequence of EMLSAP00000010092

>EMLSAP00000010092 ID=EMLSAP00000010092|Name=EMLSAP00000010092|organism=Lepeophtheirus salmonis|type=polypeptide|length=546bp
MYGLLLKNLSDYVKEVYGEQMWNKVVASLKIENDDFIIDKVYPEGQLLKM
SKKAIQVIGTSNEDFYEGMGAHFYYVLGQVCTQNDVLQKYVQILFYAQIK
AISKLIFSLDIDITLQKMEVIYDTVICTYDLKFANSIFSFDQSMQVAXKE
ASLPVRASIIFEMFPFCILFQDNLNVTCIGTALRHFIPQVVGQKLSSYFE
LVKPLIELTFEAVHSHSNNTFELATLEDVRRMVFIQEWHQMLFIACPILK
ELESLTTVGLFINELSMHDYSRETLLAQSQQYIETRISLNSLEAKSKILN
SQLTSLDAIKKKTDSLVYQMIPKSVATRLRNGEGSMNTCEAFECVTMLFS
DIVGFTTICSSLRPPQVVKLLNDLYTVFDFLVDQNAVYKVETVGDAYFIV
AGCPLRGSNHALKICDMAFDMVXGISILRDFSSGKNLEMRVGCHSGPVVA
GVIXNKMPRYCLFGHNVGLTEKFESNSLPMKIHISENSLTYDNNLDSSNE
ESKEKPQLSIKDNEDNSTPSPADFPSIDTDSQYCGGFNHSTVCNLL

mRNA from alignment at LSalAtl2s664:269628..274666+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000010092-705939 ID=EMLSAT00000010092-705939|Name=EMLSAT00000010092|organism=Lepeophtheirus salmonis|type=mRNA|length=5039bp|location=Sequence derived from alignment at LSalAtl2s664:269628..274666+ (Lepeophtheirus salmonis)
ATGTATGGCCTCCTTTTAAAAAATCTTTCTGACTATGTGAAGGAAGTGTA
TGGTGAACAAATGTGGAATAAGGTGGTAGCTTCCTTAAAAATTGAAAATG
TAAGGATTCATGAAAACATACCTATATATATATGTAGGCCTCATACTTTT
TTCTTCCTTTTCTCTCAGGATGATTTTATAATTGATAAGGTATATCCTGA
AGGGCAGCTTTTAAAAATGAGTAAAAAGGCGATCCAAGTGATAGGAACGA
GTAATGAGGATTTTTATGAAGGAATGGGAGCTCATTTTGTGGAATTAACG
GGGAAATTAGGATACTTGAAATTGATTTCATCACTTGGAAGAAATTTAAG
GAATTTTTTTGTGAATTTAGATAATTTACATCATTATCTAAAGTCAAAAT
ATCCTCGACTCAAGGCTCCATCTTTTTTCTTAACTTCCGAAACTGAAAGA
GGTATTTGAGCCCTTGAGTAATCATTTCGTATTGTCAATATATTTTAAGG
TATGATTCTTCAGTATCGAAGTAAAAGAAGAGGGTTTCAGTACTACGTTC
TTGGTCAGGTTTGTACACAAAATGATGTGCTTCAAAAATATGTTCAAATC
CTTTTTTATGCTCAGATCAAAGCCATTTCAAAACTCATATTCTCTCTGGA
TATCGATATCACTCTACAAAAAATGGAAGTCATCTATGATACTGTTATCT
GTACCTATGATCTCAAATTTGCCAATTCAATTTTCAGTTTTGATCAATCC
ATGCAAGTAGCTKAAAAGGAAGCCTCTCTTCCAGTTAGAGCCTCTATTAT
TTTTGAAATGTTTCCTTTTTGTATTTTATTTCAAGACAACTTAAATGTAA
CATGCATCGGTACGGCACTCCGACACTTTATTCCTCAGGTCGTGGGTCAG
AAACTCAGCTCTTATTTTGAGCTGGTGAAGCCTTTGATTGAGTTAACATT
TGAGGCTGTTCATTCACACTCCAATAATACATTTGAATTAGCTACACTGG
AGGATGTTCGTAATATAAATAAAGATTTCGATGCTACTTCAATTCCAGAG
TTTGATGATGAAATGAATATGGATGAGGTAATTTTTTGATATTGTATTTT
ATTTTTCCACAAGTTTTGTTTTTCAAATTTTTTTTACAGAAAAATTAATT
TTCAGTCTAATACTAAAGATTTTTGAACTTATTTTTCCAAAACAGGTAAT
TTTTTTTTTATAGGTGTGGATTTCGATTTTTTTTTTTCAAAAAATTTAAT
ATTTGAAATTTAATTATTTGAAAAATAGATGTGGATTTTGGAATTTTTTT
CCAATAATTAAATCATTTGTAAAAAAGCTGTCGATTTTGGATTTTTGAAA
TATTAAAAAAAAAAAGATTATATTAGAAACAAAAAATTGAATTTTTTTGT
GTATAGCGATGGATTTTTGAAATTTTTTTACGAAAATATTTGAAAAAAAA
TTAATATTTACAATTTCATTTTTGAAACTTTTTGTAAAAAATCTGTAGAT
TTTAGAAAAAAAAATTCCAAAAATTTTAATTTTTGTAAATAGCTACAGAT
TTTTGAAATATTCTTTCGAAAAAATTTAATTTTTGAGTTGTATTTCCCAA
CAATTTCAATTTTTTGTAAATAGCTGTGGATTTTTGAATTTGTTTTTTTG
AACAATTTAATATTAAAAAATTTGAATTTTGAATTTTTTTGTAAAAAAAG
TTGTGGAGTTTTGAATTTTTAATCCAAAAAATAAAAATTTTCTCTAAATA
GCTATGGATTTTTGAAACATTTTTCGAAAAAAAATCAATTTTTTGTGAAT
AGCTGTGTGTTTTGAATTATTTTTTTTTCCTTAAAATTAAATATTTAAAA
TTTGATTTTTTGAATAATTGTTGTAAATAACATGTGAATTTTGGAATTTT
AGTAAGAAAATTTTTTTTTTTGTTAATAGCTATGGATTTTGAAATATTTT
TCTCAAAAATTTGATATTACAAAATTTAATTTTTGAATTTTTTCCACAAT
TTTTAAAATTTTTTTTGTGAAAATCTATGAATTTTTGAAATATTTAAAAA
AAAATTTAATTTGAGTGTTTTTTTTATCAAAAAAATTACAAAAAAAAATA
AGGCCCCTCCCCTTTAAAATATAATTTTACAGACGACCTTGTGTAACGTT
TTGATATTTATTTGTATTATACTGCTTATTTTTACAACTTATTTTTCTTT
TGAAAGGATTTGGATAAGACTTTTCATATTAAAGGACGCATGGTTTTTAT
TCAAGAATGGCATCAAATGCTTTTCATTGCTTGTCCTATCTTGAAAGAAT
TAGAGTCCCTGACAACTGTTGGCCTTTTTATTAATGAGTTGAGGTGAGGT
TATTCATTAGTAATGGGATTAGGCTCTAAATACATAGTCCTTTTAGCATG
CATGATTATTCAAGAGAAACTCTTTTGGCCCAATCGCAACAATATATCGA
AACACGGATATCCCTTAATTCCCTGGAAGCGAAATCAAAAATTCTAAATT
CACAGTTGACAAGTCTAGATGCAATAAAGAAAAAAACGGATAGTCTAGTG
TATCAAATGATACCAAAATCTGTCGCCACAAGACTAAGAAATGGAGAAGG
ATCCATGAACACATGTGAGGCTTTTGAATGTGTGACCATGTTGTTCAGTG
ATATTGTTGGATTCACAACCATTTGCTCCAGTCTAAGGCCTCCACAGGTT
GTCAAGCTTTTGAATGATTTATACACTGTATTTGACTTTTTAGTGGATCA
AAACGCTGTCTACAAGGTTGAAACCGTAGGGGATGCTTACTTTATTGTAG
CAGGATGCCCTTTAAGAGGAAGTAATCATGCACTCAAGATCTGTGATATG
GCTTTTGATATGGTTGYTGGAATATCCATTCTTAGGGATTTTAGTAGTGG
GAAAAATCTGGAGATGAGAGTTGGATGTCACTCAGGTCCAGTTGTTGCTG
GAGTTATTGMGAATAAAATGCCTCGATACTGTCTATTTGGGCACAACGTG
GGCTTAACTGAGAAATTTGAATCCAATTCACTTCCCATGAAAATACACAT
TTCCGAAAATTGTAGAGCTCTTCTTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCGCAATACATAA
CAGTAGAAAGGAAGGAAGAGGGATTATCGCAGAAAGTAGGAGGTCTTAAG
AGCTATTTTTTGACATCTAAGGAAAATAGAAAACCCATCAAGAAACAGAC
TATTAAAGTTCTTTTACCAACCGACTCAGAAACACCCAAGGTGGATGGTG
AACCCAATGGAAAGGGTATACCGCATACTTACTTTTAAATACATGCTTGA
CTCTTTTTAACGATGGCCTATTTAGATTGGCTATTTTGGAACTCATCACA
GATATATTTTCCTTTAAACAAATTGCCTATATGCCTAGATCTAAACCTGC
TTTTGATCATGATCATCCATGCCATATATATAATTATAAATACCACACAT
TGCACTGCATTAAGTAAATATATTTATGCAGTTAGTGATGAAAATTTCGT
GTATTTTGGGCATGTTAAAAAATGAAAATCAACATGGTAAAGCTAATAAT
TTGAATAATATTTTGAAGGAGACCAGCTTAGCTGTTATATACATATATTT
CATTAGATTAGCTATAATCAGCTGTAATGAGAGCGAGGGGATAAATAAAT
AAAGAAGGGCATTGGCAAAAATTACTCCGAGTCCAACAAAGACGTCCATC
AAACCCTCAACCTTACTCTCCTTTTTTTATAGGCCCTAATGAAGGTTCAA
TCAGGTTTTGAATAGAGTTGAATGTAGTAGGATACAAAGTTCAATGCTCA
AGAGTTAAATACGAATGACAAAGGCTCAAGAAAAGAAAATTCATTCCTCA
GATTACCAATTCCCAAAAAACGGGCGTGCTAAAAAATACACAAGATTTAC
ATCACTATATATAATGCAACTACCTCAAGGGATATATAAATGCAAGGTTA
TGCCATCACGCAATGGGGGTTCCTGGAATTTTCAATTTGATGTACCGTAC
CGACTGCTGGGCAGGACAACCCGATTTTGACGTCATAGAGTATAACAGTT
GTATTCTTAACTGTAACAGTCAAGGAAGGCGATATTTAGCTACTTCTGGC
AACAGTATATACTATTTGACGTCACTATTAAAAGGCGTGGTGGAAGTCAA
ACTTAAGTCAGAAAAGCGTTATGGTATAACCTTGTGTTTCTATTAACCTT
GAACTACCCTATGATAATATCAATATTGTATGTACTGAGTATAAGTAGTC
CGAATAAAGGAGCTTATTTATTCTTCATAATTTTTAAGGGGAACCAGAAA
TTATAATATTTCTTGATATTCATAGAAATACTTATTCAAATGATTTACTT
ATAAGGGCAATTTCAAATCAACTTGACAAATAAAAAGACAAAATTCTACT
AGACCGTTACATAATATGATGAATTTTTTTAGAAAAAGCTCTTACTTATG
ATAACAGTACGTCTTTTTTTCTATTTCTTTTTTTTTTTTTGGTCAAACGG
ATCTAAGGGAGTCCTACAGGCTATGGTTCCCTGTGACTAATATTTCAAAA
GAGCAGCATATTAAAAAATGTTTGCAAAAGAAGTAAAAAGCAAGGCAAAA
ATAAAAAATATTCAAAATAATACCCCTACCCCCCAAAAAAGAATTAAACA
AACAAAATTGTTAAGAAGTGGCATACTGTGTAAATCTATAGTATAGAGGC
TGAAACATACATATCATTACATTTCTAGATCTGGATTCTTCAAATGAAGA
GTCAAAAGAAAAGCCTCAATTAAGTATCAAAGACAATGAAGACAATTCTA
CTCCTTCGCCAGCAGATTTTCCCTCAATTGATACCGACTCTCAGTACTGT
GGAGGCTTCAATCATTCTACAGTTTGTAATTTATTATAA

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