EMLSAT00000010112, EMLSAT00000010112-705959 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010112
Unique NameEMLSAT00000010112-705959
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s668supercontigLSalAtl2s668:190059..194758 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010112 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010112EMLSAG00000010112-692878Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000044974EMLSAE00000044974-753902Lepeophtheirus salmonisexon
EMLSAE00000044975EMLSAE00000044975-753903Lepeophtheirus salmonisexon
EMLSAE00000044976EMLSAE00000044976-753904Lepeophtheirus salmonisexon
EMLSAE00000044977EMLSAE00000044977-753905Lepeophtheirus salmonisexon
EMLSAE00000044978EMLSAE00000044978-753906Lepeophtheirus salmonisexon
EMLSAE00000044979EMLSAE00000044979-753907Lepeophtheirus salmonisexon
EMLSAE00000044980EMLSAE00000044980-753908Lepeophtheirus salmonisexon
EMLSAE00000044981EMLSAE00000044981-753909Lepeophtheirus salmonisexon
EMLSAE00000044982EMLSAE00000044982-753910Lepeophtheirus salmonisexon
EMLSAE00000044983EMLSAE00000044983-753911Lepeophtheirus salmonisexon
EMLSAE00000044984EMLSAE00000044984-753912Lepeophtheirus salmonisexon
EMLSAE00000044985EMLSAE00000044985-753913Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774198auto774198Lepeophtheirus salmonispolypeptide
EMLSAP00000010112EMLSAP00000010112Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010112

>EMLSAP00000010112 ID=EMLSAP00000010112|Name=EMLSAP00000010112|organism=Lepeophtheirus salmonis|type=polypeptide|length=258bp
MTNLGGKVALITGASSGIGRSTAILFAKLGATLSITGRDIENLQKTAKEC
EGQGGTSAPLLIQASLDIEEDVKRVVEETINRFGRLDILVNNAGILERGS
IENTSLESYDRVMNINVRSVFQTTSLATPHLIKTKGNIVNVSSVNGIRSF
PGVLAYNMSKSALDQFTKCIALELAPKNVRVNSVNPGVIISNLHYRAGLT
DEQYEEFLEHSKNTHALGRPGNPDEVAKCIAFFASSESSFCTGVTMPVDG
GRHAMCPR
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mRNA from alignment at LSalAtl2s668:190059..194758+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010112-705959 ID=EMLSAT00000010112-705959|Name=EMLSAT00000010112|organism=Lepeophtheirus salmonis|type=mRNA|length=4700bp|location=Sequence derived from alignment at LSalAtl2s668:190059..194758+ (Lepeophtheirus salmonis)
ATTTTCCCACAAGAATGCGCCACTCTCTCTCGATTTGTTCACGAACCAAC
ATAAGTAAGCAACGCTCATGAGTCCTGCCCCATTGTTAACTACTTAATAA
GAGCCATTCAAACAATCAACGTTCAGAAAACAAGTAAGGAAAAAAAAAAA
AGAATCATCTATCGTTGAAAAGAAAAATAAAAAAAATACTATATACAAGT
TTGTGATACATGGAGTACTTGTGATGGAAAAAAAATAAGCAAAGAAGCTA
GTTTTAAGAATTTAAAAAATGTAGGTAATCTCGTTTTGAAGATTGAAGAG
TATTTTTAAAGTAATACTAGCGGGATAAAGGAATATTTTTATAAAGACTT
TAACTTATGATGCAATAATAGTTACTTTAGTAACCTTTCACATCTTTCCT
TTATCATTGTACCACATTAAGATGATTGGGATTATTGGGGAGGGGATATT
TTGTAGGTATTATATAAGTGTGTGTTTTCAAAAGAAACAATGACCCGTAA
CTACTTTGTAACTCGTTTAATGATTAATAACGGATATAGTATATCATTCA
AACGATGGTTTTTTTTAATGTTAAATATTCTATGTAGATAAAGTTCATAA
AAAGAACTGTGCTCCTCTCTCACGCCCGCTTAGTATTTTACTTTACAGTA
CTACGTACTGTCCCCGGCCCAACTTCTACTCTGAACAACGTAATAATATA
TTGTTACTAATATTATTTACAAACAGCCACGACATAATCCTTAGGAGTGG
GCGAAGTGTAGTACACACAAGTAACAAGAAAGAGATTCCTCACTTGACAA
AAATTGAATAACATCAGTCGTGTTTAATCTCATCAAAAGCAGGTCTAAAG
AAGATTTTATGAATGACGAATCTTGGAGGAAAAGTAGCCTTGATCACCGG
TAATTCCCCCTCAATTTTACTCTTATATCATTTCTTTCATGACTTTGATA
CAAATTAAACTAGTAATTACAAATATAGATATCGTCATGAAATAAATGTA
ACTTTGACATAGCTTTTAATTTAATTGAAATAATTAATAAATTGAATACA
ACCTTTAACAAAAAAAAGGTGCCAGTTCAGGCATTGGCCGCTCAACAGCA
ATCCTATTCGCGAAACTGGGTGCGACTCTGAGTATTACGGGACGAGACAT
TGAAAATTTGCAAAAAACGGCTAAAGAATGTGAAGGACAGGGAGGGACAT
CCGCGCCCCTTTTGATTCAAGCGAGCTTAGACATTGAAGAAGATGTCAAA
AGGGTTGTGGAGGAGACTATTAATCGATTCGGGAGATTAGATATATTAGT
TAACAATGCGGGGATTCTGGAAAGAGGATCTATTGAAAATACATCCTTGG
AATCCTACGATCGTGTCATGAACATCAACGTGAGGTACTAATTAATAATT
ATCCTTTCCATTAAGATCAACAATAGTACTTGCAATACTACAATGAATTC
TGTTTCAAAACTTTGTATCAGTGTGTCATATCTATTCAATTGCACTTAAT
ATTTCAGGTTTATTTATTGATTGGGGAGGTTCTATAAGCAGGGTTCTAGA
AAGTAAAGATGGTTAGTGAGCTAATATGGGGATTATGTTCTCTATCAATA
TCATGGTCTACTCTTATGATGACTATGCAGGGGGAGGGCATTTTTTTAAA
GGATTTTTCATTTGTATCAAATTCTTGGGTGGATAATTTTGTATAACTTT
TTCAAAAATTCTAAAAAACCAACCCCCTTCCCCGTAATATAATCCTGTGG
AAGCCCTTGCTATAACAAAAACATATATTCAATAGTAAAAGAACATTTTA
GTAACCTTTTCTTATTCGTTGTCAGTATGAATATTCCTCCATTTGTTTCT
TGAATACATATTATTATGATCGATTCTTCCAAATATTAGTTGTATCTTTT
TTTTCGTCTTTTACATTTTAAAAGCTTTTAATACCATAAATAAATTCTTG
TTATCTCAATATACTTATTCATATCGTAGTAACTACATGAATTATCACTT
CCTAGGTCAGTTTTCCAAACCACGTCTCTGGCAACTCCACATCTGATAAA
AACTAAAGGAAATATAGTTAATGTGTCTAGCGTAAACGGAATCAGATCAG
TAAGGAAACACCTAAAAAATCATAATTTTACCATATTTTTGAATTAGCAA
TGATATATAATAATTGATTAGATTGTTCTATTTAATTATTAAGGAATCTT
TAATGTCCTCAATGATTTACATTTTCCCTGTTGTATCAAAGATAACGTTC
CTTTTTCTTTGTTTTCAACAACCACCACTTCAACCAGGGTTAAATATTGA
TAACACAGAGAACTTGCAAATCATTGAGCGCATTTTATACCCCTTAAACG
ATTAAAAACAAGGTTTTCAATATTTTATACATAATAGTGAGGAATTTATA
GACCTCAAAGGCTTTCTATATGCCCTTTTCTTCTAAAATTTTTGATATAT
GGCTTTAGTAAATAATATGAAATGGTAAGACTATGTGTTCCTTCGTATAA
ACAGTTTCGTAATTATTAGCATTTTGTTAAAAGGTTGCAACCCTTTGATA
TAAATTGTAACATTTCTGATGTAGTTTCCAGGTGTATTAGCATATAATAT
GTCTAAATCAGCTCTTGATCAATTTACTAAGTGTATAGCCCTGGAACTAG
CTCCTAAGAATGTTCGCGTTAACTCTGTTAAGTAAGAATGGCATGTTCAA
TTAAAAAATAATGCACCGGATGAACATTATTTTTTTATGTATATTTTAGT
CCAGGAGTGATAATCTCGAATCTTCATTATCGTGCAGGGCTAACTGATGA
ACAGTATGAAGAAGTAATGATAATAACATCACTTAAAGCATATTATATTG
TAACTGATTTTATCTCATTTCCTTAGTTTCTTGAGCATTCTAAAAACACG
CATGCTCTTGGCCGTCCTGGAAATCCTGATGAAGTAGCCAAATGTATTGC
ATTTTTTGCATCTTCCGAATCTTCCTTTTGTACGGGAGTGACAATGCCTG
TTGACGGTGGTAGACATGCCATGTGCCCTCGATGATTCCAACAATTTTGG
GTCTTGATTTTGAGAGAGAGAGAAAAAGTAACCCATGATTCATATTGTAG
TCCTGATGTATGATCCTTATTTGTTATATTGAGGAGAGGCTAAGGACGCA
TTACCCATCCTTAATTTATATTTTTGTAGAATATTGTAATTAGTTATAAT
ATAGACATCATTGAAAGAGTTTTTAGAATGTTATTTTGAGTACGTATTGA
TATTATATTACACTGAACAAGGTTGAATTCAATATTCCTAATTGGTTGAA
AATTACTTAATGCTCATTAGATCTGTAAATACTGGGGAAAGGGGAAATAG
TTGTTTCAGATGTAATATTTATTGGTGTCTATTAATGATGAGTCATCCAT
AGTCACTTAAATGAGCCATAACCGTGATTAAGGCACTAATATATAAAATA
TAACCATTTCTGTTGATTTTTTAATATTATTTACATCTTTTTAGAGCTGT
ATACCAATTGTCAATGCTGGCAGTTCCACATCTGACTAAAACGAAGGGGA
ACATTGTAAATGTTTCGAGTGTGAATGGAATTCGATCGGTAATCAACATG
TTACTTTATTGCAATTAATATATTTATATCTAAATCATCCATCAGTTCAC
AGGAGTATTGGCTTATAATATGTCAAAAGCTGCGTTGGACCAGTTTACTC
AGTGTGTTGCCTTGGAATTAGCACCCAAAGGAATCCGCGTTAACTCCGTC
AAGTATGTATATACATTAAGATTTATAAATACAAAATAAAACTAGATATT
GCTAGTGCAATAAACTCTGCCTCAAATTAAATTGAGTTTTTTGTCTAATT
TTTTTCAAAAGTTATGGTGGATTATTCATGTTCTACGTTTTGTGACCATG
TATAATCGTTCTACCAATTTTGAACAACATCGACCCGTAACTTTTGCAGT
AATCCTGTTGACTAACAAACAGGGGCAAAAACATAACATCATTTCAACTT
TCTTGGCGGACGKAACAACTGATATTCATATAATATGTTTTGTCTTTCAG
TCCTGGTGTTATTCTCACGGATATACATAAGCGTTCCGGTCTTACACCAG
AAGAATACAAACAAGTAGGATTTGCATTTATTTTATATAAAGATAAAATA
TAAATGTAATTTGGTATTTTTTAATAGTTCCTTGAGAAATCTAAAGCAAC
ACACGCTCTGGGCCGAACCGGAAGTGCAGAAGAGGTTGCTCAGGCTATCG
CCTTCTTAGCTTCTTCCAACTCCTCATTCTGCACTGGCGTACTATTACCC
GTTGATGGTGGACGACACGCAATGTGTCCACGCTGAGGGGAGACGAAATG
TGACTGGAACGAGCTTGACATAATCGGAAATGCATCATCACATTTACTTT
ATATGTATATTATCTTCTGAATAAGAAGGGCACTAATTAATCATTCATAT
CAAATATATTCTTCCATATGTTTGGATGAGCCCATGTTAATGTATTAATA
AATCTTAAACTCACGTCACAGATTGTAATATTTTTCTGTTTAGGGAACAC
TAAATTTAAGACTATAAAAAAAATTAAATTTATTTTTTATAAAAAGTTTT
ACTATTAAACAATTATAATTTCAATGATCTAGAATATGGATTAATTATTT
TTAACTAGCCCAATTTAATAAGTGTATCATGCTCTTGTTTAATATACATT
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