EMLSAT00000010253, EMLSAT00000010253-706100 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010253
Unique NameEMLSAT00000010253-706100
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s67supercontigLSalAtl2s67:820060..822439 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010253 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010253EMLSAG00000010253-693019Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000045579EMLSAE00000045579-754507Lepeophtheirus salmonisexon
EMLSAE00000045580EMLSAE00000045580-754508Lepeophtheirus salmonisexon
EMLSAE00000045581EMLSAE00000045581-754509Lepeophtheirus salmonisexon
EMLSAE00000045582EMLSAE00000045582-754510Lepeophtheirus salmonisexon
EMLSAE00000045583EMLSAE00000045583-754511Lepeophtheirus salmonisexon
EMLSAE00000045584EMLSAE00000045584-754512Lepeophtheirus salmonisexon
EMLSAE00000045585EMLSAE00000045585-754513Lepeophtheirus salmonisexon
EMLSAE00000045586EMLSAE00000045586-754514Lepeophtheirus salmonisexon
EMLSAE00000045587EMLSAE00000045587-754515Lepeophtheirus salmonisexon
EMLSAE00000045588EMLSAE00000045588-754516Lepeophtheirus salmonisexon
EMLSAE00000045589EMLSAE00000045589-754517Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779840auto779840Lepeophtheirus salmonispolypeptide
EMLSAP00000010253EMLSAP00000010253Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010253

>EMLSAP00000010253 ID=EMLSAP00000010253|Name=EMLSAP00000010253|organism=Lepeophtheirus salmonis|type=polypeptide|length=546bp
MVIMSSIFILLVLTHHIFGEDTGHCSAMTDSCTETNYWGTFDWKSYIEKD
LTVENIEDPLSKYGVDVVKSYETAYNRSIPDFRIHGCNKFSTVKDSYKPV
SIVITFFLEPRSVLLRTIVSIIERTPKELLKEIILVDDGNEDSSIGEELS
VIKKVKLIRNQKREGLIRSRIIGAKATSDNVVMIFLDSHCEVGYDWVLPL
LETIFVYPKSIVSPVIDNINLYTFGFEPVSTYLRGGFDWSFDFFWEFIAH
KDELQRKXQPYNSFPTPAIAGGLFAIEKDWFFELGAYDEGMEIWGVENIE
LSVRAWTCGGALRIAPCSRVGHIYKLSQPYDYPIGKTKTLECNKIRFSKV
WLXQFEVLFRSTIQKSHISNDIECGDILPRIKLRKDLECKSFQWYLENIY
PNMPIPNFGDIGFGSIFSRSDPYWLNCVDTISPGDEGVLGVHTCIRSYSP
QNFHYNKDRQINRNDFCWTIQKGTDNIKPIYCDSQNQFQKWTPIYPNKSS
KVTAGYSFFNNETDKCIEVSSEKKLIGAACDLENLNQRFMFEMNSP
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mRNA from alignment at LSalAtl2s67:820060..822439-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010253-706100 ID=EMLSAT00000010253-706100|Name=EMLSAT00000010253|organism=Lepeophtheirus salmonis|type=mRNA|length=2380bp|location=Sequence derived from alignment at LSalAtl2s67:820060..822439- (Lepeophtheirus salmonis)
ATGGTGATCATGTCATCCATATTCATCCTTCTAGTCCTGACTCATCACAT
TTTTGGAGAAGATACTGGACATTGTTCAGCAATGACAGATTCGTGTAAGT
CATGAAATATAACCAAYCCATCCATTAACAAAAAAATGCTTATGAGCCCT
ATGTATGTATAATTATTGCAAATGATACCCTTATGTGTAATGCACTTTCT
CTCAATTTAAATAAATATATGGAATATATTTAAAAAAAAGAAAAAAAGGA
AGCATATCCCTAACTTTAATTGAACTAAAACATGATTCCAGGCACAGAAA
CAAATTACTGGGGTACTTTTGATTGGAAATCCTACATTGAAAAAGATTTA
ACCGTCGAAAATATTGAGGACCCTCTCAGTAAATATGGAGTTGACGTAGT
CAAAAGTTATGAAACCGCTTACAATAGAAGTATTCCAGACTTTCGGTAGT
AATTTCATAAAAATCAAATTATTTTTAAATCAATTATTTATTTACATAGA
ATTCATGGATGTAATAAATTTTCTACTGTTAAAGATTCGTATAAACCTGT
GAGCATTGTAATCACATTCTTTTTAGAGCCTAGATCCGTGCTTTTAAGAA
CAATTGTAAGTGGTGTTTTAAATTATGTAGGATCAATCAAAGTTATTGAA
AATTTCATTATTAGGTGAGTATCATTGAGAGGACACCCAAAGAGCTTTTA
AAAGAAATAATTCTTGTTGATGATGGTAATGAAGATTCGTCAATCGGGGA
AGAACTAAGTGTGATAAAAAAAGTGAATAAATGTCGATGTTACGTAGATC
GTAGATAATAATATTTTTATTTTAATATTTGGAAAGGTCAAATTAATCCG
TAATCAAAAGAGAGAAGGACTGATCCGCTCAAGAATTATTGGTGCAAAAG
CAACCTCTGATAATGTTGTAATGATATTTCTTGATAGTCACTGTGAAGTT
GGATACGATTGGGTTTTACCACTCCTTGAGACGATTTTTGTTTATCCTAA
AAGTATTGTATCACCAGTGATTGATAATATTAATTTGTATACTTTTGGAT
TTGAGCCTGTTTCTACGTACTTGAGAGGTGAGTATAGCCATATCCTTCGA
AATGGTAATTTTAAACGAATTTATTTAATTTTTAAAGGTGGATTTGATTG
GTCTTTTGATTTCTTTTGGGAATTTATTGCACATAAAGATGAACTTCAAA
GAAAATTMCAGCCATACAATAGTTTTCCAACTCCAGCCATCGCCGGAGGC
CTGTTCGCAATTGAAAAGGACTGGTTTTTTGAGTTAGGGGCATACGATGA
AGGAATGGAAGTAAGAAGTTTAAAGCTTATAAAGTTATATTCGTCATAGC
TATTATCATGACATACATAGATATGGGGTGTAGAAAATATTGAACTCTCC
GTTCGAGCTTGGACCTGTGGAGGTGCATTAAGGATTGCACCTTGTTCTAG
AGTAGGGCACATATACAAATTATCACAACCCTACGACTATCCCATTGGAA
AGACAAAAACTCTAGAATGCAATAAAATTAGATTTTCCAAAGTGTGGCTG
GRCCAATTTGAAGTCTTATTCCGATCTACAATTCAAAAATCTCATATTTC
AAACGACATAGAGTGTGGTGATATATTACCTCGCATCAAACTTCGAAAGG
ATCTTGAATGCAAATCATTTCAATGGTATTTGGAAAATATATATCCAAAT
ATGCCCGTAGGAACAATATTTATTATTCTTTAGTATATCTATCTAAATGT
TCACATATTTTAGATTCCGAACTTTGGTGATATTGGGTTTGGTTCGATTT
TTTCTAGAAGTGATCCTTATTGGCTCAACTGCGTGGATACAATATGTATT
TAAAATTTTATTCAACAATCAAATAATTATTTTCTATAGAATAACTTTTT
TTTATATAGCTCCTGGAGATGAAGGGGTTCTTGGAGTTCATACATGCATT
CGTTCATACTCCCCTCAAAATTTCCACTACAACAAAGACAGACAAATTAA
CAGAAATGATTTCTGTTGGACAATTCAAAAAGGAACAGATAATGTAACAT
AATTTTATAATTACTCCAGGAATAAAAAATAATTCCAATTCCTTTTACGT
ATAGATCAAACCTATTTACTGTGACTCGCAAAATCAATTTCAAAAATGGA
CGCCCATATATCCAAATAAATCCTCGAAAGTAACAGCAGGGTATTCTTTC
TTCAACAATGAGACTGATAAATGTATAGAAGTTAGTTCTGAAAAAAGTAA
CTGAATATCMCTTGAATGAGCATCTCTTTTATAATCATTTTWCTTTTTTT
TTTTTTAAGAATTGATTGGAGCTGCCTGTGATTTAGAAAATTTAAACCAA
AGATTTATGTTTGAAATGAATTCTCCGTGA
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