EMLSAT00000010379, EMLSAT00000010379-706226 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010379
Unique NameEMLSAT00000010379-706226
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s689supercontigLSalAtl2s689:23775..24831 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010379 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010379EMLSAG00000010379-693145Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000046166EMLSAE00000046166-755094Lepeophtheirus salmonisexon
EMLSAE00000046167EMLSAE00000046167-755095Lepeophtheirus salmonisexon
EMLSAE00000046168EMLSAE00000046168-755096Lepeophtheirus salmonisexon
EMLSAE00000046169EMLSAE00000046169-755097Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769614auto769614Lepeophtheirus salmonispolypeptide
EMLSAP00000010379EMLSAP00000010379Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010379

>EMLSAP00000010379 ID=EMLSAP00000010379|Name=EMLSAP00000010379|organism=Lepeophtheirus salmonis|type=polypeptide|length=183bp
MNPYQCPNKNILIKSIREKKNLFPLVIDCTVSGWXXWSQCDVQCGAGTSI
RRRQIIHPPSNGGNECPVLEEKKPCRVKNCRRKHDKFNDKMAIRETAMLV
PAKFAKKQRRQARNYDVRHRVCVSCDGNAQRDHLGGRCTGHGAEGRKTRF
KNILSPHCKGKWTRLQVVQGQCPCPEGADLVFV
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mRNA from alignment at LSalAtl2s689:23775..24831-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010379-706226 ID=EMLSAT00000010379-706226|Name=EMLSAT00000010379|organism=Lepeophtheirus salmonis|type=mRNA|length=1057bp|location=Sequence derived from alignment at LSalAtl2s689:23775..24831- (Lepeophtheirus salmonis)
ATGAACCCTTATCAATGCCCTAATAAAAACATTCTCATCAAATCAATTCG
AGAAAAAAAAAGTTAAACTTACCTCACTTAATAACACCTCAATCCTAAGA
TACAAACTAAAAATAATACTATCTTAATAGGATTTCAGGTCATGTTTTTA
TTGCCACTTTCACCTATCTTAATCTTGAAATATTAACTCGATAGTTCATG
CCAAAGTACTATTCACTTCTATTCAGTAAAACTCTAATCAAAATAGAATA
CATAGTAATATAGATTTGTTTCCCCTAGTGATTGATTGCACGGTAAGTGG
ATGGMCAGKGTGGAGTCAATGTGATGTTCAGTGTGGAGCAGGAACTTCTA
TCAGAAGAAGACAGATCATTCATCCACCATCAAATGGCGGAAATGAGTGC
CCCGTCTTGGAAGAAAAGAAGCCTTGTAGAGTCAAAAATTGTCGTAGAAA
GCATGACAAGTTTAATGATAAAATGGCAATTAGAGGTAAAAGCAATAGCA
ATACATCTTAGATATTAATTACAAAAATTAATTAATTATTTTTGATTCAT
CAATTTTTACATAGAAACGGCAATGTTAGTACCTGCAAAATTTGCGAAAA
AACAACGAAGACAAGCTCGAAACTATGATGTCCGTGAAAATCTCAAAACA
TACATACAAAAAGATCAAAAAGAAGAATCTCAATCTAGCTACTGTGTAGT
TTTCCATGTGGATAAATCCATGCATGCCTGTCATCGGAGTGAGGATACAT
CCATGCTTCTTAAGGGTATTCATCAGTTTTTTTCCACAAATTTAATTTGA
ACCTTAATCATATAGCTGAATTTTACCATCTATAAAATATTTACATATTT
CCTATAGGTCATCGTGTCTGCGTTTCTTGCGATGGTAATGCTCAAAGAGA
TCACTTGGGTGGCCGATGCACCGGTCATGGAGCAGAGGGTAGAAAAACAA
GATTCAAGAATATATTGTCTCCTCATTGTAAAGGAAAGTGGACTCGTCTC
CAAGTTGTGCAAGGACAATGTCCTTGTCCTGAAGGAGCAGATCTTGTGTT
TGTCTAG
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