EMLSAT00000010450, EMLSAT00000010450-706297 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010450
Unique NameEMLSAT00000010450-706297
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s691supercontigLSalAtl2s691:40343..43519 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010450 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010450EMLSAG00000010450-693216Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000046553EMLSAE00000046553-755481Lepeophtheirus salmonisexon
EMLSAE00000046554EMLSAE00000046554-755482Lepeophtheirus salmonisexon
EMLSAE00000046555EMLSAE00000046555-755483Lepeophtheirus salmonisexon
EMLSAE00000046556EMLSAE00000046556-755484Lepeophtheirus salmonisexon
EMLSAE00000046557EMLSAE00000046557-755485Lepeophtheirus salmonisexon
EMLSAE00000046558EMLSAE00000046558-755486Lepeophtheirus salmonisexon
EMLSAE00000046559EMLSAE00000046559-755487Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770289auto770289Lepeophtheirus salmonispolypeptide
EMLSAP00000010450EMLSAP00000010450Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010450

>EMLSAP00000010450 ID=EMLSAP00000010450|Name=EMLSAP00000010450|organism=Lepeophtheirus salmonis|type=polypeptide|length=383bp
MSXEGXSETLRSINYYFCHHCSTHFTLNSIPNDDTXAVCPRCHMGFIEEL
PDPPPASTLNSPQDFLETINGMILLRFLRPFEILAERPSRGSQDAPLAFI
GFPNFMQGLTNILSNFDGARGQQIHLIQPNPGMTMHSNPGDYVFGGGGID
AIVTQILNQPLDGVGPPPLDKELIKEIPTVKISREQVGSSLQCAVCWEDF
VLDEPVRELKCDHFFHEQCIIPWLELHGTCPVCRKFQQEEQNKEDGSITN
NETSSGDNTENTWAPWTNATDLNDVITSAIETVFRSVEYXTXPLSASQPP
SSSVSTSSTGGNSSSSNGSGETSSGTNERGTSNSDISNLDYYDFDLDLIC
LPFSAPIYRTFWDYPIGFNSLGRKVEIIVKSLI
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mRNA from alignment at LSalAtl2s691:40343..43519-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010450-706297 ID=EMLSAT00000010450-706297|Name=EMLSAT00000010450|organism=Lepeophtheirus salmonis|type=mRNA|length=3177bp|location=Sequence derived from alignment at LSalAtl2s691:40343..43519- (Lepeophtheirus salmonis)
ATGTCTGSCGAAGGGGKTAGTGAAACATTAAGATCCATAAATTACTACTT
TTGTCATCATTGTTCTACACACTTTACTTTGGTAAGAATCAAGTTCGCAT
TTCCAATCTAAGAGACATTAGGTTAATTCGTTTTATGTATTCTGATATCT
ATGTATGTTACAGAACTCCATTCCAAACGACGATACGMCGGCTGTGTGTC
CGAGATGTCATATGGGATTCATAGAAGAGCTTCCAGATCCTCCTCCTGCC
TCCACGCTTAATTCTCCGCAGGATTTTTTAGAGACTGTAATTTCCATTTT
CTTGTGCTAGGCTCATTTTGTGCTGTTTGGGTGGGTGGGTGTTTGGGTAA
TGGAGGGCATTTCCCACTGGTGACATGACACGTGACATTTCCACACATCT
TGATCTTTGGATAGGAAATCATGTCTAGTATTGTACTATGAATCATTTCA
ATCCTACTGTCAAAGTCTTGTCCATTCTTTTAAACCACTCAATGTATCAA
TATTTTTGTATTCTTTTTTTTTGCAAACCTGTCATGTCACATTGGCTCAT
ATATTTGCATCTTATTGCTTAATATATGGTGCCCCCATTTGCTCAAATGC
AGGCGAAATGTGCTAACATAGAGAATCAAAATGAATTGTTTTCTTTATAA
CTATATAAATGTTTGTTTTTTTATCTTTTTCAGATTAACGGTATGATTTT
ACTTAGATTCTTACGACCATTTGAAAGTAATGTACATAGTATCTTGCCTT
CACTTCCCACTCCAAATTTCTTACTTACATTCAATATTAATTTGTTGTCT
TTTCATTAGCTGTAGAACATGTTAAGCTTTTATTTTTCTTAGTTTTTACG
TATTTAAAAATTATATCTTCATATTCAGTTTTAGCTGAGAGACCTTCCAG
GGGAAGTCAAGATGCTCCTTTGGCCTTTATTGGGTTTCCAAATTTTATGC
AGGGCCTCACTAACATCCTTTCCAATTTTGATGGGGCTCGTGGTCAACAA
ATTCATCTCATCCAGCCAAATCCTGGAATGACTATGCACTCCAATCCAGG
GGATTACGTTTTTGGTGGAGGTGGAATCGACGCCATTGTCACACAAATTT
TAAATCAACCTTTGGACGGGGTTGGTCCTCCACCTTTAGACAAAGAACTA
ATAAAAGAAATACCCACAGTTAAAATTAGCCGTGAACAAGTTGGTAAGTT
CTCTTTATTTAAATATGGGTAATGTCATGTGATTGAGTGATTTTTTTTGC
TTCATATCTAATAATTCAAAGTTATTCATGTGACATTGGCAATCAATATT
TAACATTTTTTAGTGTTCCTTCCAGTCATCTTATTACTTAATACATTAAA
ACACATGTAGGGTGCCATCAAAGGTTGTTCAATGTTCATCGTGAAGTTAA
CCCCCAGACTTTCAATGCAACTTGAGTTTCCTGCCTGAATTGTGAAACGA
AGACTTGCTCTATTATTCTAAATTATCTTCTTGGAATTATTATTTGTTTC
CTCTACAGTGTTATTTGTATTACTGAAATTGGTAAGGAATACAAGTACAA
ATAAAGAGATGACTTTAAATATTATCTCATTTGATCGTTACCATCTCATA
AATAAATAAATATGCAAAACAACATTTTAAATTTTACTGATGCTCTTTGC
CAATAAAGTGCCGTTCCTTAATAATGATGTGTAATGATATTATTTTAGGT
TCAAGCCTTCAATGTGCCGTTTGCTGGGAGGATTTTGTTCTAGACGAACC
TGTTCGAGAGCTAAAATGTGATCACTTTTTTCACGAACAATGTATTATAC
CTTGGTTAGAGCTTCATGGTACTTGTCCTGTTTGTCGTAAATTTCAACAG
GAGGAGCAGAATAAAGAAGATGGTAGCATCACTAACAATGAAACTTCTTC
CGGTGATAATACGGAAAACACTTGGGCTCCCTGGACAAATGCAACCGATC
TTAATGATGTCATTACATCTGCAATTGAAACAGTCTTTAGGTATGATTCG
TGATTTATACGTGATACATGTCGCATGTGCATTCAGTGTTTATAGTATTT
ATTCATTCTTGATCCTTCATTTTTAATATGCAATATATGTACCATTGTAT
AATTTCACATTTGATATTCATGAAAATGATGCACCATATTTATGGGACCA
CTATGTATTCTATTTTTTTATTTTTATAATGGGTTTTTTACATATGTCAC
TGCTTGAGTATAAAAATGTTCCTATCTGGTCAAATTTCAAAAATTGTGTA
ATTACGACAATGTTCAGCTTATCTTGAACAATATGTATAAAAGTACTTTT
TAACATACTCTTATTATTGTGGCTTTTATCAATTGTTCTATCTGGCAGAT
CTTTTATTTATACGAGCAGAAAAATTTACATTCCCTTTCCTGAACAATTT
TGAAATGTCCAGATATGACGTTTTTATTATAAATGTGTAAATGAAAGCTA
TGGATACGTCGATTGAATTGAATACTTGTCTGGCAATATCATTGAATACT
TGTCTGGCAATGAAATTAAAATCATTGAATGTATCATTTGTTCCAGGAGT
GTTGAGTATMCCACAYCCCCCCTCTCTGCATCTCAGCCACCATCATCATC
AGTCAGTACTAGCAGTACTGGAGGAAACTCTTCATCATCCAATGGTTCTG
GAGAAACAAGTTCGGGTACGAATGAACGGGGAACATCCAATTCCGATATT
AGTAATTTGGATTATTACGATTTTGATTTGGAGTAAATAAAAGATTATGT
ACTTCATTGATCTTTAAAAAAAATAATGTTATTTATTGCTACTACTATTA
TTGTCGCTATTACAATTACTATGAAACGCAAAGCTCTATTATAAGAAGAT
GAATAATTTTTTAATTTGATAAAATTAGATTTAGTCAAATATGATTCATA
ATTGTATCTGATCAGCGCCTCGACTACTCGTTAAGTTATTGTAAAATATA
TCAAAAATAACACCATCGACACTGCAATTTTCGTTGAACTTAATTGGATG
ATGATTAATTTAATGAATAAATTTATCCACAACTCACGACTATTCTGTCT
ATTTTTTCCAATTAGTCTGATTTGTCTACCCTTTAGTGCTCCTATTTACC
GAACATTTTGGGACTACCCTATAGGTTTCAATTCATTAGGAAGAAAAGTT
GAAATTATAGTGAAATCCCTCATATAG
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