|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s6 | supercontig | LSalAtl2s6:77419..83158 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000010547 >EMLSAP00000010547 ID=EMLSAP00000010547|Name=EMLSAP00000010547|organism=Lepeophtheirus salmonis|type=polypeptide|length=1884bp
MCSSILTLLILCLISGSCWGLNLPPEFTADMNQHTILENTPIGTVIYTLT
GKDPEGKEVEFGLEGTDKLKVDPKTGEVRVLKIIDRERQEGRNEIRLSVV
ISDGVDGNEIRPNVVRLPITLIILDENDNPPVFQRTPYYDSIPEDTPAGV
IVYRTLEATDEDEXGEALEVKCDEQESTDNVCEIFEIRPRRQETDLFVFR
GDVFLLKELNYNKKQIYQVPIIAYDGKHLVKSSITFEVIDVQNTPPVISG
VLTGVLNEDDPIGTLVLRVQAADGDTGSPRKIVYELLENPFGYFSIEPYT
GEIRVDKQLNREETNGVLTLQVRASEIIQGVVSSEDPTTSTTAEITVTIQ
DVNDEPPKFNKREYSVTIPENVAFGTPLANLDMLIKDSDTGPNSIFKLQL
TDSSGKFEIEPKMAQGTTAVSVKVNSKELDYENPNHRHFLLLVVATEVST
DKLLSSTATINVRVNDLNDNIPVFEKDAFTAIMNEDDPIGTVIAKITAKD
SDGGDYGTDGIRYSLNGMGAELFNVDDVTGEISIAPCDNNCIDYEKTQFY
FLSYSAIDDQGRGKKSVTNIRVSVTDSNDNPPEFEEDEVIISIMEGQTNF
EPKLVLEANDEDDSSKLSFKIIGGNENNLFDLNEETGEIKVNGKDGLSLN
TLLTNKILLDVEVSDGTFTDSVTVSILIKDINNHSPVFSEKNYTSKVPEN
APIESLVETVKASDSDFEKNAEISYRVVSGSYDDFIVDSTSGEIRVSGSL
NYDRKSRYILEVIAVDSGYPSALTGTTTVVLDIIDENDKIPYFYPSTQRT
HITEDSKVGTILFRLNATDIDAEXSSLEYGIIEPITAIDQDGTLVINIID
VNDFSPRFQSPWSIEEPTIYIDVNEEESNGTEVYTFTADDPDSKIDYFII
RPKNHFFQVEKGSGILKIRNRINYEELDTKNIVFDLYVYDSGIPQKSATA
NIVVNIININDEEPKFNTSMYSANILENSPPGTPLIQVHAEDLDEGEYGK
VSYSLYGRHKDVFSIDPQRGNISVKDSSILDRETLKFFPIQVVVEDSAPV
EFRKSSSIPINVTILDVNDHAPIFISKKYEATIVDNIQYHPFPSAIIKVN
GIDKDEGKHSELFFEISSGNEDKLFYIDNTTGVLYPNASFSGYNGQSFVL
EVQVLDEGGKERIWESPDKAIIEIDVDNVNSHKPEWFPDPPLNEKIEVAE
ESGETNYVIMKVNARDMDIGDNQRISYFLKVNNKNVEETSEFSMNPNTGE
LKAKVVFDREKTANYELVLVAKDHGTPVSFEALRFVTVDITDINDNKPTF
PSQEPIKFNVPENEEPGYFVGQIAASDPDEGVNGYIYYHVIDGNLGREFN
VEKSTGKVYTKMKLDRESISQYTIKIMVTNEPQLSCDIDDCDFKMDGSEW
IYESNGKTNKVELKIFVEDKDDNDPSFESEEYNAGVKHNAKVGDSVIDVL
AYDLDEDNRKFSYTIRTSDLFPSGSKESAGSLVPFPFDINQNGRXSLSSL
MAEFNQDKFELDVEAKELSTGRKAKTKVNIWIIESHQLIKLVVNKEPLKA
NQFKEDIIKELSNITENTVLVSDIRYHVTEDNRLTRDMTDMYLSVVNKNE
NMIVHPDEIIKIADENYDYLNSYYEEAGIVSILPASQTSHQMEEPFDKNL
AALIALILVTFIGIVIFSILCCCSKSWVASSYSNKPMRLQESPQLGYSSH
KLSHAGSVIDNTXAGCGNGTDNPLWIDQKYKAYEEQELTMTVFTDQENSV
ISGNNGQNQNNGNNHSGHDSNLMETQSNAYATINKFPNTLSSRRTNLFNS
ALDLNSERDYATLEKNISRSPPGPVVPGIHPSAGIFQGSLPRRFSNEFDS
STAPVLPPGNKQIHRSNLTINKEGEPELVAELMD back to topmRNA from alignment at LSalAtl2s6:77419..83158+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000010547-706394 ID=EMLSAT00000010547-706394|Name=EMLSAT00000010547|organism=Lepeophtheirus salmonis|type=mRNA|length=5740bp|location=Sequence derived from alignment at LSalAtl2s6:77419..83158+ (Lepeophtheirus salmonis)
ATGTGCTCAAGTATATTGACTCTCCTAATTTTGTGTTTAATAAGTGGATC
ATGTTGGGGACTAAATCTTCCACCCGAGTTTACAGCGGATATGAATCAAC
ATACAATATTGGAAAATACTCCTATTGGAACAGTTATTTATACTCTTACA
GGAAAAGATCCTGAAGGAAAGGAGGTAGAATTCGGACTTGAAGGAACTGA
CAAATTAAAAGTAGACCCAAAGACTGGAGAGGTCCGAGTACTTAAAATAA
TTGATCGAGAGCGTCAAGAGGGGCGTAATGAAATTCGTTTATCTGTTGTT
ATTTCTGATGGCGTTGATGGAAACGAAATTCGTCCAAATGTTGTTCGTCT
TCCTATAACTTTGATCATACTAGACGAAAATGACAATCCGCCCGTATTTC
AAAGGACTCCATATTATGACTCTATTCCTGAGGATACACCTGCTGGMGTC
ATTGTGTATAGGACATTAGAAGCCACTGATGAGGATGAAGMAGGAGAAGC
TTTAGAAGTCAAATGTGACGAACAAGAATCTACAGATAATGTTTGTGAAA
TTTTTGAGATCCGCCCGAGACGACAAGAAACAGATCTTTTCGTTTTTCGT
GGAGATGTATTTCTACTCAAAGAGCTGAATTATAATAAAAAACAAATTTA
TCAAGTTCCTATTATTGCCTATGATGGAAAGCACTTAGTAAAGTCTTCAA
TTACTTTTGAAGTAATTGATGTTCAAAATACGCCTCCAGTCATAAGTGGA
GTTTTAACAGGTGTTCTAAATGAAGATGATCCGATTGGGACACTCGTATT
ACGTGTACAAGCAGCGGATGGAGATACAGGGTCTCCTAGAAAAATCGTGT
ATGAGCTACTAGAAAATCCTTTTGGATATTTCAGTATAGAACCATACACG
GGGGAAATACGTGTTGATAAACAACTAAACCGAGAGGAAACAAATGGAGT
TCTTACGTTACAAGTTCGTGCATCTGAAATCATTCAAGGTGTTGTGTCAA
GTGAAGATCCAACTACTTCTACAACTGCTGAAATAACTGTGACTATTCAA
GATGTCAATGACGAGCCTCCCAAATTTAATAAAAGAGAATATTCTGTTAC
CATTCCTGAAAACGTTGCTTTTGGAACACCCTTGGCCAACTTGGATATGT
TAATAAAGGACTCAGATACGGGTCCTAACAGTATATTTAAGCTTCAACTT
ACAGATAGTTCTGGAAAATTTGAAATTGAACCAAAAATGGCGCAAGGTAC
AACTGCTGTAAGTGTAAAAGTTAATTCTAAAGAACTTGACTACGAAAATC
CCAACCATAGACATTTTTTACTTCTTGTGGTTGCTACTGAAGTCTCAACA
GATAAACTTCTTTCATCAACAGCTACAATTAATGTCAGAGTGAATGACTT
AAATGACAACATTCCAGTTTTTGAAAAAGATGCGTTTACTGCAATTATGA
ATGAAGATGATCCTATTGGAACGGTTATTGCAAAAATAACTGCTAAAGAT
AGTGACGGGGGYGATTATGGMACTGATGGMATTCGTTACTCGTTAAATGG
AATGGGAGCAGAACTTTTTAATGTTGATGATGTAACGGGGGAAATTTCGA
TTGCTCCCTGTGATAACAATTGTATAGATTATGAAAAAACTCAATTTTAT
TTTTTGTCCTATTCTGCTATAGACGATCAAGGCAGAGGGAAAAAATCTGT
TACAAATATACGTGTATCTGTAACGGATTCCAATGACAATCCACCAGAGT
TTGAAGAAGATGAAGTTATTATAAGTATCATGGAAGGACAAACAAATTTT
GAACCAAAACTTGTACTAGAAGCTAATGATGAGGATGACTCATCTAAGCT
ATCGTTTAAAATTATTGGTGGAAATGAAAATAATCTTTTTGATTTAAATG
AAGAAACAGGAGAAATCAAAGTAAATGGTAAAGATGGATTAAGTCTGAAC
ACACTTTTAACAAATAAAATATTGTTGGATGTAGAAGTATCAGATGGTAC
TTTTACTGATAGTGTAACTGTGAGCATCCTTATAAAAGACATAAATAACC
ATTCACCCGTATTTTCAGAGAAAAATTATACTAGTAAAGTACCTGAAAAT
GCACCAATTGAGTCTTTAGTTGAGACTGTCAAGGCTAGCGATTCTGACTT
TGAAAAAAATGCAGAAATTAGCTATCGAGTGGTATCTGGATCTTATGATG
ATTTTATTGTTGACTCTACTTCCGGTGAAATTCGTGTGTCTGGATCATTG
AATTATGATAGGAAGAGTCGCTATATTCTTGAAGTAATTGCTGTCGATAG
TGGTTATCCATCTGCGTTAACTGGTACAACCACAGTTGTACTCGACATAA
TAGATGAAAACGACAAGATCCCTTATTTTTATCCGTCGACCCAGAGGACC
CATATAACTGAAGATTCTAAGGTTGGTACAATATTATTTCGTCTGAATGC
TACTGATATTGATGCTGAAAKCTCGTCGTTGGAATATGGTATCATCGAGC
CTATTACTGCTATTGATCAAGATGGTGCTCAAGTCAATAACTCGGATATT
TTTAAAGAATTTTTTGCTGTCAATTCTNNNNNNNNNNNNNNNNNNNNNNN
NNGGAACAGGAACCTTAGTTATAAATATTATCGATGTAAATGATTTTAGT
CCTCGTTTCCAAAGTCCATGGTCTATAGAAGAGCCTACTATTTACATTGA
TGTTAATGAAGAAGAATCTAATGGTACAGAAGTTTATACTTTTACTGCAG
ATGATCCTGATTCAAAAATTGATTATTTTATCATTCGTCCGAAAAATCAT
TTTTTTCAAGTTGAAAAAGGGAGTGGAATACTTAAAATCCGAAATAGAAT
CAATTATGAAGAATTGGATACAAAAAATATCGTATTTGATCTGTATGTCT
ATGATTCGGGTATACCTCAAAAAAGTGCAACAGCAAATATTGTTGTTAAC
ATCATTAATATAAATGATGAAGAGCCAAAATTTAATACCTCGATGTATAG
TGCAAACATTTTGGAAAATTCTCCACCTGGAACTCCATTGATTCAAGTTC
ACGCTGAAGATTTAGATGAAGGCGAATATGGTAAAGTAAGCTATAGTCTT
TATGGACGCCATAAAGATGTTTTTTCAATCGATCCCCAAAGGGGAAATAT
AAGTGTCAAAGATTCAAGTATTTTAGATAGAGAGACTTTGAAGTTTTTCC
CAATTCAAGTTGTCGTTGAAGATTCTGCTCCCGTTGAGTTTCGTAAGTCA
TCATCGATTCCCATCAATGTTACAATTCTGGATGTTAATGACCATGCTCC
AATTTTTATTTCTAAGAAGTATGAAGCAACTATAGTAGATAATATTCAGT
ATCATCCTTTTCCTTCTGCAATCATAAAAGTTAATGGCATTGATAAGGAC
GAAGGTAAACATAGTGAACTTTTTTTTGAAATATCTTCCGGTAATGAAGA
TAAACTCTTTTATATTGACAATACAACTGGTGTTCTTTATCCAAATGCTT
CTTTTTCGGGATATAATGGTCAAAGTTTTGTTTTAGAAGTTCAGGTTCTA
GATGAGGGAGGAAAGGAAAGAATTTGGGAATCACCTGACAAGGCAATAAT
TGAAATTGATGTTGATAATGTTAACTCTCATAAACCTGAGTGGTTTCCGG
ATCCACCTCTTAATGAAAAGATAGAAGTCGCCGAGGAATCTGGAGAAACA
AATTATGTTATAATGAAAGTTAATGCTAGGGATATGGACATAGGGGATAA
TCAGCGAATCAGCTATTTTTTGAAGGTAAACAATAAAAACGTTGAAGAAA
CTTCGGAATTCAGTATGAATCCCAATACGGGAGAGCTAAAGGCTAAAGTT
GTTTTCGATCGAGAAAAGACCGCTAATTATGAACTTGTTCTTGTTGCAAA
GGACCACGGCACGCCTGTCAGCTTTGAAGCTCTGAGATTTGTTACAGTAG
ATATCACGGATATTAATGACAATAAACCCACATTTCCATCTCAAGAACCA
ATAAAATTCAACGTTCCAGAAAATGAAGAACCAGGATACTTCGTTGGACA
GATTGCAGCATCGGATCCTGATGAAGGTGTAAATGGATATATATATTATC
ACGTTATTGATGGTAATCTTGGAAGGGAGTTCAATGTCGAAAAATCTACT
GGAAAAGTATATACCAAAATGAAGTTGGATCGAGAATCTATTTCACAGTA
TACTATTAAGATAATGGTAACAAACGAACCTCAATTAAGCTGTGATATTG
ATGACTGTGATTTTAAAATGGATGGGAGTGAATGGATTTATGAATCAAAT
GGGAAAACAAACAAAGTTGAACTTAAAATATTTGTGGAAGACAAGGATGA
TAATGATCCAAGTTTTGAAAGTGAAGAGTATAATGCCGGCGTTAAACACA
ATGCAAAAGTTGGAGATTCTGTCATTGATGTTTTAGCTTATGATTTGGAT
GAAGATAATAGAAAATTCAGTTACACAATACGTACGTCGGACCTCTTTCC
TAGTGGATCGAAAGAATCAGCTGGRTCTTTAGTCCCATTCCCGTTTGATA
TTAATCAAAATGGGAGGRTTTCTCTTTCATCATTGATGGCTGAATTCAAT
CAGGATAAATTTGAACTAGATGTTGAGGCTAAAGAACTCTCTACTGGTAG
AAAAGCTAAGACCAAAGTCAATATATGGATAATTGAATCACATCAGTTGA
TTAAATTAGTTGTAAATAAAGAACCGTTGAAGGCAAATCAATTTAAAGAG
GACATCATTAAAGAGTTATCTAATATTACAGAAAATACCGTTTTAGTCTC
TGACATTCGCTATCATGTGACAGAAGATAATCGATTAACTAGAGACATGA
CGGATATGTATCTAAGTGTTGTAAACAAAAATGAAAATATGATAGTTCAT
CCAGACGAAATAATCAAAATAGCGGACGAAAACTATGATTATCTTAATAG
CTATTATGAAGAAGCTGGAATAGTTAGCATTCTTCCTGCATCTCAAACAT
CTCATCAAATGGAAGAGCCTTTTGATAAGAATTTGGCAGCTCTGATCGCT
CTTATACTTGTTACTTTTATAGGTATAGTTATTTTTTCTATATTATGTTG
TTGTTCAAAATCATGGGTAGCGTCGTCTTATTCAAATAAGCCTATGCGTC
TTCAAGAATCCCCCCAATTAGGATATTCAAGTCATAAATTAAGCCATGCA
GGTTCTGTTATTGATAATACAGAKGCAGGATGCGGAAATGGAACTGACAA
TCCACTCTGGATTGATCAAAAATATAAAGCTTATGAAGAGCAGGAGTTAA
CTATGACAGTTTTCACAGACCAAGAAAATAGTGTTATTAGTGGTAATAAT
GGCCAAAATCAGAACAACGGAAATAATCATTCTGGACATGACTCAAACCT
CATGGAAACTCAAAGTAACGCATATGCTACAATAAACAAATTTCCTAATA
CTCTTTCCTCTCGAAGAACAAATCTGTTTAATAGTGCTTTAGATTTGAAT
TCGGAAAGAGACTATGCAACGTTAGAAAAGAATATATCACGTTCTCCTCC
TGGGCCTGTTGTTCCTGGTATACATCCTTCAGCAGGAATATTTCAGGGAT
CTCTCCCAAGAAGATTTAGTAACGAATTCGACAGTTCAACTGCTCCAGTC
CTTCCTCCGGGGAATAAGCAAATCCATAGATCAAACTTAACAATAAATAA
AGAAGGTGAGCCGGAGTTGGTTGCAGAATTAATGGACTAA back to top
|
