EMLSAT00000010604, EMLSAT00000010604-706451 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010604
Unique NameEMLSAT00000010604-706451
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s705supercontigLSalAtl2s705:272952..276084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010604 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010604EMLSAG00000010604-693370Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000047259EMLSAE00000047259-756187Lepeophtheirus salmonisexon
EMLSAE00000047260EMLSAE00000047260-756188Lepeophtheirus salmonisexon
EMLSAE00000047261EMLSAE00000047261-756189Lepeophtheirus salmonisexon
EMLSAE00000047262EMLSAE00000047262-756190Lepeophtheirus salmonisexon
EMLSAE00000047263EMLSAE00000047263-756191Lepeophtheirus salmonisexon
EMLSAE00000047264EMLSAE00000047264-756192Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775660auto775660Lepeophtheirus salmonispolypeptide
EMLSAP00000010604EMLSAP00000010604Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010604

>EMLSAP00000010604 ID=EMLSAP00000010604|Name=EMLSAP00000010604|organism=Lepeophtheirus salmonis|type=polypeptide|length=533bp
MWTYAHRLWIIRTFHTSSGGCRTRFRGSRGGGRSHRGSSGASTLLDKFVK
QFAPNGSLIVRSPFNVKVRGSYFDKKNNVDRLKNKRVYDEIYSELQSSED
VSISTPKVPALSEFSGDSIDSNIINKLSQTLESILPQSKSILPRITPLHV
LLYGRLHHRIDSYSIVDANQKQNTHLYLTDANSFEEAESMLNQQIHSMDT
SNLVPDGLFTLLTPSLHPNELLGKKLKNILDSTKLNDDEVLSSSFKVFCP
KHIFDIPNSGLKSVFLIPTVMSKIYLQGEGGSHLELDSTLIHKIDSVGLH
TEYGNITVRDLVCQEIRLASQMGDIMCEGNLEGHVVVETNHDGDFLASHV
DGPSMLVTTDDGDINVLGSVNSDVSQFYTRNGHIHVKHLNNQSYMLVRES
GNILVSVDEGFITAVVKTGTINVSIDQLTADSTLQVEDGEIILKVYKKRN
FRINAIAQHINISPLIANQGDFSFSDESSHHQTFQIDPSAKASDHLPCPV
LKVEVLQGTLNLSLIPEEEDKSTNSESESHKNT
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mRNA from alignment at LSalAtl2s705:272952..276084+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010604-706451 ID=EMLSAT00000010604-706451|Name=EMLSAT00000010604|organism=Lepeophtheirus salmonis|type=mRNA|length=3133bp|location=Sequence derived from alignment at LSalAtl2s705:272952..276084+ (Lepeophtheirus salmonis)
GACTTTCAAGAATTTCAAAGAAGGAGCTGTGGGTGGAGGACGAGAGCTCT
CTCTGCTCCTCACTGGGTATCTCAATCGATTATTCTCTCGTTTTATGGAA
CTCTTTAGTTCTTATATGTAGAAGTATACGAGGATTCCATAGATCTGGAG
GAATTTATGTATAGGTAATTGAAGAGGAACCTGCACAATGAACGAMCCTT
CCATTAAAGGAGATGAGATCCACCGAACGAAGCTATAGTTCAAGGGATCT
CGCCTTCTCTCACCCCTGTCCTTCTACTGATTGATGGGTAATTGAGTTCT
AAGTCATATGATATCTACTAAAGTATGGCCAATAAGTTCTTATACTATGT
ATTATATTATAGTATAAGAACTCATTGGTCTTGCCAAGATACTTGGAGAT
CTTAGATACTAAGTATCTTGAGTCTGGCCATAGGTTTTGTTTTGTAAATC
AAAAAGAAATTGAAGTCCATAAATATATATATATAGGTCGCAGCTAAATC
TCATCAGCTGAGTTTTCATAATACTAATATTTATTGTTCATATCAAAGAT
CACGTGGTCTAATCCCTTTGCTTTCTATCTTTGAATATAGAAATTGACGG
ATCCCACTGACTGGTATATTCCAATTTGATATATTAATATTGTCTATTGA
CATAGTTATACTAGTCATTGATCATTTTTGTATATATCTCTGATAAATTC
AGAGATGTGGACGTATGCACATCGCTTATGGATAATAAGAACATTTCATA
CCAGCAGTGGAGGATGTCGAACAAGATTTAGAGGATCTCGTGGAGGAGGA
AGGAGCCATCGAGGTTCTAGTGGAGCCTCAACGCTCCTCGACAAGTTCGT
TAAGCAATTTGCCCCCAACGGATCTCTCATTGTGCGTAGTCCCTTTAATG
TGAAGGTTCGTATCTCAAACTTAATATATGTGGAATTATCTATAAACCGC
AAATTTGAAATTTATCTTCTTCTATAGGTTCGAGGATCTTATTTTGATAA
GAAGAATAATGTGGATCGCCTTAAGAATAAGCGGGTCTATGACGAAATCT
ATAGTGAACTACAGAGTAGCGAAGATGTCTCAATATCTACCCCTAAGGTC
CCTGCTCTATCGGAGTTCTCGGGGGACTCGATTGATAGCAATATTATAAA
CAAGCTCTCCCAAACCCTTGAATCAATTTTACCCCAATCCAAATCCATTC
TTCCTAGAATAACCCCTCTTCATGTTCTCCTGTATGGTCGATTACATCAT
CGTATAGATTCCTACTCAATTGTTGACGCCAATCAAAAGCAAAACACACA
CTTATACCTCACAGATGCTAATTCTTTTGAGGAGGCAGAGTCCATGCTCA
ATCAACAAATTCATAGCATGGACACATCAAATCTTGTTCCCGATGGKCTC
TTTACATTACTCACTCCTTCTTTGCATCCAAATGAATTGCTGGGTAAAAA
ACTCAAAAACATACTTGACTCTACTAAACTGAATGACGATGAAGTTTTAT
CATCGAGTTTCAAGGTGTTTTGTCCTAAGCACATCTTTGATATTCCAAAT
AGTGGATTAAAGTCTGTTTTTCTTATTCCAACCGTGATGAGTAAAATCTA
CCTCCAAGTACATAATTCATTTGTAATCATTTCAATAGTTGTTGCTTTTT
TTTCTTTGATTAGGGCGAGGGAGGCTCACATTTGGAGTTAGACTCCACTT
TAATACACAAAATTGACTCTGTGGGCCTCCATACAGAGTATGGAAACATT
ACTGTTCGTGATTTGGTTTGTCAAGAAATTCGTTTAGCCTCTCAAATGGG
AGACATCATGTGTGAAGGAAATCTAGAGGGTCATGTAGTAGTCGAGACAA
ATCACGATGGCGACTTTCTTGCATCTCATGTAGACGGCCCTTCTATGCTT
GTTACAACGGATGACGGAGACATCAATGTCCTTGGAAGTGTAAACAGTGA
TGTCTCTCAGTTTTATACTCGGAATGGTCACATTCATGTTAAACATTTAA
ACAATCAAAGCTACATGCTCGTAAGAGAGAGTGGAAATATACTTGTGAGT
GTAGATGAAGGGTTCATCACTGCCGTGGTTAAAACTGGGACCATTAATGT
GTCTATCGATCAGCTAACTGCAGATTCTACTCTTCAGGTTTGTTTTGCCG
AAATAATATGACACTATAATATCACATATTATTTTATTTTCAGGTGGAAG
ACGGTGAGATTATACTTAAGGTGTACAAGAAGCGCAACTTCCGAATCAAT
GCAATTGCTCAGCATATCAATATTTCACCACTGAGTAGGTCCTTTATTTT
AGGTTTTAATTAGAGTCACACTCATTTACTCACTTTTCTTCCACAGTTGC
TAATCAAGGAGACTTTTCTTTTAGTGATGAATCGTCTCATCATCAAACCT
TTCAAATCGATCCCAGCGCTAAGGCATCTGATCATTTACCTTGTCCTGTC
CTCAAAGTAGAAGTCCTTCAAGGAACTTTGAATCTATCATTGATCCCTGA
AGAAGAGGACAAATCTACGAATTCAGAATCGGAGAGTCATAAAAACACGT
GATATTGCAAATTATCTAGCCAACTAATTATGTTACAATTGTTTGCTTTT
TTATGTAAACGTTTTTATTTATTGGATATAGACATTAAGTTCTAACTTTG
AATATAAGTTCTACTCGATCAACGCATCCCTTAAAAACAGCTTACGAACT
TATTTGTTTTAAATTAGTGGTACAAGAAACACTAGATACAGAATGAGAAT
AATATACACACAAGTATAATCAATAAGGGTGATTTGTAATGATAGGTTAT
TATCCGTAATGTATAGTGCTATMAAATATATAGAGGAATCGGACGACTTA
CTMAAGCCATATTTGTAGGCTTAAATTATATAATCGAGTCTTAAAGTTCA
GAATGTCCTGGCATCTTAAACTGAGAAGCATAAGTCTCAACACGCTTGTT
CAAATCTTTGATTTTACTTGAAATTGCCTCATTTTCATCGAGTTCTCTAT
TCCATGTCTTTAAATCCGCGCCTACATTATTTTTTGCTTCCTTAGCAATA
GTTAAAGCTATAAAAGAAATAAGGATAAATGAGCATTGGCTAAGCTATGA
TTGAATAAATCACCTTCATGAATAAAATTGACG
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