EMLSAT00000010636, EMLSAT00000010636-706483 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010636
Unique NameEMLSAT00000010636-706483
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s705supercontigLSalAtl2s705:454508..456953 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010636 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010636EMLSAG00000010636-693402Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000047399EMLSAE00000047399-756327Lepeophtheirus salmonisexon
EMLSAE00000047400EMLSAE00000047400-756328Lepeophtheirus salmonisexon
EMLSAE00000047401EMLSAE00000047401-756329Lepeophtheirus salmonisexon
EMLSAE00000047402EMLSAE00000047402-756330Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777828auto777828Lepeophtheirus salmonispolypeptide
EMLSAP00000010636EMLSAP00000010636Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010636

>EMLSAP00000010636 ID=EMLSAP00000010636|Name=EMLSAP00000010636|organism=Lepeophtheirus salmonis|type=polypeptide|length=575bp
MCSRGGKCYFLRSPRSLYACSLKAVSYHFRHVRSLILESPESVRFDIFAE
LYDQGWMSLLWNELSCVSTFLSLLRVGDRRRRLHRIFQSVIDHGNPIHTT
LTNKLYLLIKSNPSDYKESTLNFSSFLSEAGWFAEARKLLFPYYNPSSPC
PIVLLSLLHNVSAYCEFAEASDYMSLLKVTPHPHPAAVYCQFSSSCFDKS
EYPEAFRWSRLAIQSLSNDLPIKVVIDVLRQSSKSYVIRRQFSKAKMLIL
EAILLSKETYGEWHPKYADCLLDYGYYLLNADRVIKSLQAYQSALEVRLK
CFGSQNLQVAFALEGLAYTTYVNQYNTGQFERAKSHAEKAIGIMNNLLPK
SHLLLAXSXRVLALILEEIAVDHADEDISRNLLNQAESLHRSAIQLSIKS
FGEVNVQTAKHYGNLGRLNQSMRRYAKAEKMHLKAIEIKEKLLGNDDHEV
ALSVGHLASLYTYDLKEYSKAELLYLRSIEIGIKLFGPGYSGLEYDYRGI
IRVYQEIEDWPNYFVYTYKLREWEELQGLRNHDEVTKACFSKGDPLPLSS
IIQALDDNGMEDSYCSSNQKLPEVM
back to top

mRNA from alignment at LSalAtl2s705:454508..456953-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010636-706483 ID=EMLSAT00000010636-706483|Name=EMLSAT00000010636|organism=Lepeophtheirus salmonis|type=mRNA|length=2446bp|location=Sequence derived from alignment at LSalAtl2s705:454508..456953- (Lepeophtheirus salmonis)
ATGTGCTCTCGCGGAGGAAAGTGTTATTTTCTTCGTTCTCCTCGGAGTTT
GTATGCTTGCAGTCTAAAGGCGGTCTCATATCATTTTCGGCATGTTCGCT
CTCTGATATTAGAATCCCCGGAGTCAGTTCGGTTTGATATCTTTGCAGAG
CTCTACGATCAGGTATGAAGGAGAGGAAGAGTTGTGGGTGTTGAGCATAG
TTTGCTACTCATGATGTCTTTTGCATTTGTTTTTCCAGGGTTGGATGAGC
CTTTTATGGAATGAATTGAGCTGTGTGTCTACGTTTCTGAGTCTTTTACG
AGTTGGGGATAGACGAAGGCGTCTGCATAGAATATTTCAGTCAGTTATTG
ATCATGGTAATCCCATTCACACCACACTCACGAACAAACTCTACCTTCTC
ATTAAATCCAATCCTTCAGACTACAAAGAGTCCACTCTGAATTTCTCTTC
TTTTCTCTCTGAAGCGGGTTGGTTCGCAGAAGCTCGAAAGCTCCTCTTTC
CCTACTACAACCCCAGCTCTCCTTGTCCCATTGTTCTCCTTTCCCTCCTA
CACAATGTATCAGCCTACTGTGAGTTTGCAGAGGCATCCGACTACATGTC
TCTCCTCAAAGTGACGCCTCATCCTCATCCAGCAGCCGTTTACTGTCAAT
TCTCTTCCTCCTGTTTCGACAAGTCTGAGTATCCTGAAGCATTCCGATGG
AGTCGACTTGCTATTCAATCTCTTTCTAATGATCTACCTATTAAGGTCGT
TATCGATGTTCTCAGACAATCCTCTAAGTCCTATGTCATTCGGAGACAAT
TCTCCAAGGCCAAAATGCTCATTCTTGAAGCCATACTTCTCTCTAAAGAA
ACCTACGGAGAATGGCATCCCAAATATGCTGATTGTCTTTTAGACTATGG
ATATTATTTATTAAACGCTGATCGAGTCATAAAGAGTCTACAAGCCTATC
AGTCAGCACTTGAGGTGAGTTCCTTGGATTCATTTATATACACTTAAATT
TTTTAATCATGGAGGAATTTATTTACATAAAAAGGATAAGAAGGGGTAAA
CATAGCATATTTGTGTCCTTGATGTTTTCTTCTTATGATGTAAATCAGGT
CTTGACCCAAATTTCATTATGTGTCAATATTTTAAACGGTACTATGAACA
TTAACATAGTATAATAGTAATGTATATCTTTTTATTCTTTTTTCCTTAGG
TTCGTCTAAAATGTTTCGGGAGTCAAAATCTCCAAGTAGCTTTCGCTCTT
GAAGGATTGGCCTATACTACTTACGTTAATCAGTATAATACAGGACAGTT
CGAAAGAGCAAAGAGCCATGCAGAAAAAGCTATCGGAATCATGAATAATC
TTCTACCCAAGAGTCATCTTTTATTGGCTTRTTCTCKGCGTGTTTTAGCT
CTAATCCTCGAGGAAATAGCCGTAGATCATGCTGATGAAGATATATCTCG
AAACCTCTTGAATCAAGCGGAGTCCCTACACAGATCTGCAATTCAGCTGA
GTATCAAATCCTTTGGAGAAGTCAACGTTCAGACTGCAAAGCACTATGGA
AACTTGGGTCGCCTCAATCAAAGCATGAGACGGTATGCAAAAGCTGAAAA
AATGCATCTCAAGGCCATAGAAATCAAAGAGAAACTCCTTGGCAATGATG
ACCACGAAGTTGCTTTGAGTGTGGGTCATTTGGCCTCTCTTTATACCTAT
GATCTGAAAGAATATAGTAAGGCAGAGCTGTTATATCTCAGATCCATTGA
AATCGGCATCAAACTTTTTGGACCTGGCTATTCTGGACTTGAGTATGATT
ATAGAGGGATTATCAGAGTGTATCAGGAAATTGAAGATTGGCCAAATTAT
TTTGTTTACACTTATAAATTACGAGAGTGGGAAGAGTTACAAGGTCTCAG
GAACCATGACGAAGTCACAAAAGCTTGTTTCTCTAAAGGAGATCCTCTCC
CACTCTCAAGCATAATTCAAGCACTTGACGACAATGGTATGGAAGACAGT
TATTGCAGCAGCAACGTAAGGAATTAAAAAAATATATAAGCTTGAATTTT
TTAACGAGAAAGAAATTGTGGATTTTCTTAACATAAGTTTGGATATGAAA
GCAATGCACAAGAACAGTTTTTTTCTTTTTTCGCTGTCTAACTTTAATAA
TGTATGTTATTGTTTTATTTTATTTTATTTTATTTTGTAAAGTTAATTCA
TTCTGCAAGATATAGTGATAAGATTTTCATCCCTTTCAAGTGTTCTTTTA
TAATGTTAATCAGGCAAAACAATTGAGAAATCGGTCGGTCTCACTTACTT
TTATCTACTTACTAATTATCAATTATAATTCATTCAGAAGGCATTTAGCG
TCATACTAATATATATTTTTCTTAATTTAAAAAAATCAACTACAATTAAT
ATTTACCTATTCATATTTTCAGCAAAAGTTACCTGAAGTGATGTGA
back to top
Add to Basket