EMLSAT00000010649, EMLSAT00000010649-706496 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010649
Unique NameEMLSAT00000010649-706496
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s705supercontigLSalAtl2s705:571566..575516 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010649 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010649EMLSAG00000010649-693415Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000047451EMLSAE00000047451-756379Lepeophtheirus salmonisexon
EMLSAE00000047452EMLSAE00000047452-756380Lepeophtheirus salmonisexon
EMLSAE00000047453EMLSAE00000047453-756381Lepeophtheirus salmonisexon
EMLSAE00000047454EMLSAE00000047454-756382Lepeophtheirus salmonisexon
EMLSAE00000047455EMLSAE00000047455-756383Lepeophtheirus salmonisexon
EMLSAE00000047456EMLSAE00000047456-756384Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778659auto778659Lepeophtheirus salmonispolypeptide
EMLSAP00000010649EMLSAP00000010649Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010649

>EMLSAP00000010649 ID=EMLSAP00000010649|Name=EMLSAP00000010649|organism=Lepeophtheirus salmonis|type=polypeptide|length=1074bp
MKVLSLLLAVFAISTRCQEEEEGDLSGGWGNQISWISWSSQVRKDGRKVK
PSMVLLHDPSCPACQRLKPLFASSEEIRDSSPHFHMIQASKNEEPSSLSL
FSPDGSYIPRILFLAPNGTLLKEIINPQANPSYQYFYYDPQDIVHSMKQD
YSIGEKIGAGTYGTVFKATKKTGPREVVAVKAIYKKGLVKKEVDNIISEI
TLLKTLKHQHIVEMVDFTWDTSYIYIIMEYCGGGDLSRFIRLKKSLPECV
VKKFLQQLGLALQFLRSKNISHMDLKPQNILITQSRVLKLADFGFAKKIK
LSQKEMGIRGSPLYMAPEMLLEKRYDAKVDIWSVGVILYECLFGYAPYKS
STTLELYEKIKEDIAIEIPTSGISVKCSDLLKRCLDRHPETRIDFEEFLS
HPFMDLEHIPCQKSFAKALELSFQAIEADKKEDFQTAFRLYKESLEYFVP
LLHDESDPNKKVLLRKKVDGFIIRAETLKEALGPIKPLGKIKNFENNKSS
ETLVPNKESSSQYKELSMLSGSTPGLKSSIDILHQAELYEAEGRLKYALE
QYESGLKIIMPILINEPKGHRRTLMNAKIQRWMSRAEKIKIDLQTQESSI
LTTLSSEDANGLHWIIMSVSEDSINLCLMSSVHACKETLYVSFRDSSTVQ
DVLNYYLIRVQAPGIGKVSYILLNDQRVPFKPESTLSKVLGKDVKSASLI
LSSPSELNLKYYFTNFHCFNKSLSSSVYLGATDGLRELNQTLPCETRELM
TKVKNTLSSIVSDSFVEILTNTKQGILGWRGIHSKSGGNQTTADWGKFSL
QVTFPTKDSNQTNNLNYLTLDNYGGKNYINSNTYNCYGDVESHRRFLVTL
YYQEYIETGDFPEEVIDPCLNTEITYSFSDLFQNNCTLKMIDFNFLVQIK
EYFTKRIQFIPGYLELESCSSKIEQTLSICKEIFEESCFESSIEIPGSKV
YGLRGGFSTLKKQLSMNSSSPSDKEWELELKFACSSSNSTSLCFRGNFIR
SILGKSAIKFEDTFGWPQGYADDFFSKERPKDSFTTLSPSAFTLLMILST
SFCLIGSFFVYEAHIIQKKDRSNN
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mRNA from alignment at LSalAtl2s705:571566..575516-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010649-706496 ID=EMLSAT00000010649-706496|Name=EMLSAT00000010649|organism=Lepeophtheirus salmonis|type=mRNA|length=3951bp|location=Sequence derived from alignment at LSalAtl2s705:571566..575516- (Lepeophtheirus salmonis)
ATGAAAGTCTTATCCCTCCTCTTGGCCGTTTTCGCCATCTCGACCCGCTG TCAGGAAGAGGAAGAAGGAGACTTATCAGGTGGATGGGGCAATCAGATAT CTTGGATCTCTTGGTCTTCTCAAGTCCGGAAGGATGGGAGGAAAGTGAAG CCCTCAATGGTTCTCCTTCATGACCCGAGCTGCCCCGCTTGTCAACGCCT TAAACCCTTATTTGCCTCCAGTGAGGAAATCCGGGATAGCAGTCCACATT TCCACATGATACAAGCCTCCAAGAACGAGGAGCCCTCATCCCTTTCTCTT TTCTCTCCTGACGGATCCTACATTCCCAGAATTCTCTTTCTCGCACCCAA TGGGACTCTCCTAAAGGAGATCATCAATCCACAGGCCAATCCCAGCTACC AATACTTTTACTATGATCCTCAAGACATTGTTCATTCCATGAAGCAAGTC ATTTACCTTTTTTCACTCCACAAATCTGAACTTTAAGAATAACTTTTAAC ACAATGGCCAGYCTGCCACTTCCTCCTGTTATACTCAAGGACTATTCCAT TGGAGAAAAAATCGGGGCTGGAACATATGGCACAGTTTTTAAAGCTACCA AAAAAACGGGTCCACGAGAAGTGGTTGCTGTAAAAGCCATCTATAAAAAA GGCCTTGTTAAAAAAGAGGTCGACAACATTATCTCAGAAATTACGCTCCT TAAAACCCTTAAGCATCAGCACATTGTGGAAATGGTCGATTTTACATGGG ATACGTCCTATATATACATCATAATGGAGTACTGTGGAGGAGGAGACTTG TCGAGGTTCATTCGATTGAAAAAATCCTTGCCAGAGTGTGTCGTCAAAAA GTTTTTACAACAATTAGGACTAGCGCTTCAATTCTTACGTTCTAAAAACA TATCTCATATGGATTTAAAGCCTCAAAACATTCTCATCACTCAGAGCCGT GTTCTCAAGTTAGCGGATTTCGGGTTTGCCAAAAAAATAAAACTCTCTCA AAAGGAAATGGGTATTCGGGGCTCTCCTCTCTATATGGCTCCTGAAATGC TTTTAGAAAAAAGGTATGATGCCAAGGTGGATATTTGGTCCGTTGGGGTC ATCCTTTACGAATGTCTATTTGGCTACGCACCTTATAAATCCTCCACGAC TCTGGAATTGTATGAGAAAATCAAGGAGGATATTGCGATTGAAATCCCCA CTTCCGGAATTTCTGTCAAGTGTAGTGATCTTTTAAAACGATGTCTGGAT CGACATCCAGAAACTCGTATTGACTTTGAAGAGTTTCTTTCACATCCTTT TATGGATCTAGAGCATATTCCGTGTCAAAAAAGTTTTGCCAAAGCCTTAG AATTGTCTTTTCAAGCTATAGAGGCCGACAAGAAAGAAGATTTTCAAACT GCATTTAGGTACATCATAACTCATATCTATTCTATAAAACTATCAATAAT ATAATTAATTATTCTAATTCCAGACTTTATAAAGAGTCTCTGGAATATTT TGTACCTCTCCTTCATGATGAGAGCGATCCGAACAAAAAAGTTTTGCTCA GAAAAAAAGTAGATGGATTCATAATACGCGCTGAAACTTTGAAGGAGGCG TTAGGTCCTATCAAGCCTTTGGGGAAAATTAAAAACTTTGAAAATAATAA ATCATCAGAAACTCTAGTTCCCAATAAAGAAAGTAGTAGTCAATACAAAG AGCTTAGCATGCTATCTGGGAGTACTCCAGGTCTAAAAAGTAGTATTGAT ATCCTTCATCAAGCTGAATTATATGAAGCTGAAGGAAGACTCAAATATGC TCTCGAACAATACGAGTCTGGACTCAAAATTATTATGCCTATTCTTATTA ATGAGCCCAAGGGTCATCGACGAACTTTAATGAATGCCAAAATTCAGAGG TGGATGTCTCGTGCAGAAAAAATTAAAATTGATCTTCAGACTCAAGAGTC GTCAATCCTTACAACTCTCTCCAGTGAAGACGCTAACGGAGTAGATGCAA GTACTACACTCGATAAAAATTGTTCCATCCAATAATTAATTTGTAATAAT ACACACAATACATGCATATATTTATTGATCTCAAATCCTTTTAAAATACA TAATGTACATCAGCTTCAAATCTGTATTATCAGATCCTTTTTCTTTTTTC TTCTGTTATAGTTACATTGGATCATCATGAGTGTCTCTGAAGATAGCATT AATTTGTGTTTAATGAGTTCTGTTCATGCATGCAAAGAAACATTATATGT GTCATTTAGAGATTCCAGTACAGTTCAAGATGTATTGAATTACTATCTAA TTAGAGTCCAAGCTCCAGGCATTGGAAAAGTGTCTTACATTCTTCTCAAT GATCAAAGAGTTCCCTTTAAACCGGAATCAACTTTATCTAAGGTTCTTGG GAAAGATGTCAAGTCTGCTAGTTTGATATTGAGTGTGAGTCAAGTTTCAG AAACAAGAAGATTGGATTTAATACTTATAATCGGGATTTGTTATTTTTTC TGGATTACTTCCTTAGTTATAGGACTTGTGATGTATTTGACCCATGGATG GAGTTCCCATGGGGGATCATTGACTATTATCAATGCTTATTCTCATGGAA CTGAGTTATATTTATTTAAATCTCATGAAAGGAATGCAAGATTTACATGT TCAATAAATTCATCTGCTGGCATTTCTGTCCTCATAAATGTACCTATTTA TTTGCTTCTTTTCCCATAGCCTATATATATATTAATTATCATTGATCTCT CGTTTGCAGAGTCCAAGTGAACTTAATTTAAAGTATTACTTTACAAACTT TCATTGTTTCAACAAATCATTATCTTCATCAGTCTATCTTGGTGCTACTG ATGGTCTAAGAGAGCTGAATCAAACTCTTCCTTGTGAAACAAGGGAATTG ATGACTAAGGTCAAGAATACTCTAAGTTCTATAGTTAGTGATTCATTTGT CGAGATTTTGACTAATACAAAACAAGGAATACTTGGTTGGCGTGGAATAC ATTCAAAATCGGGGGGAAATCAAACTACTGCAGATTGGGGGAAATTTTCC CTTCAAGTACGTATTTATTCTTTTCGTAAAGTTATCAATTTTTTTTTTAA TCATGCCTTTACTATACAAACTTACATAGGTTACATTCCCAACCAAAGAT TCGAATCAAACCAACAACTTGAATTACCTTACACTTGACAATTATGGGGG AAAAAATTATATAAACTCAAACACGTATAACTGTTATGGAGATGTTGAGA GTCACCGCCGGTTTCTAGTTACCTTATACTATCAAGAGTATATAGAGACT GGAGACTTTCCTGAGGAAGTGATTGACCCTTGTCTTAATACTGAGATCAC TTACAGCTTTTCTGATTTATTTCAGAATAACTGTACTCTAAAAATGATTG ATTTTAATTTCTTAGTACAGATCAAAGAGTATTTTACTAAACGAATTCAA TTTATCCCTGGTTATCTTGAGCTTGAGAGCTGTTCCTCCAAAATTGAGCA AACATTAAGTATTTGTAAAGAAATTTTTGAAGAGTCCTGTTTTGAGTCCA GTATTGAGATTCCTGGCTCAAAAGTCTATGGTCTCAGAGGTGGGTTTTCA ACATTGAAAAAACAGCTATCAATGAATTCCTCGAGTCCCTCGGACAAAGA GTGGGAACTTGAGTTGAAATTTGCTTGTTCTTCTAGTAATAGTACTAGTC TATGCTTCAGAGGGAATTTTATAAGATCTATACTCGGGAAAAGTGCAATA AAATTTGAAGATACATTTGGATGGCCTCAGGGCTATGCAGACGATTTCTT TTCGAAAGAACGACCAAAGGACTCATTTACTACTCTATCTCCATCAGCTT TTACTCTATTAATGATTCTTTCAACATCCTTTTGTCTAATAGGCTCTTTC TTTGTCTATGAAGCTCACATCATCCAAAAGAAAGACAGAAGTAATAATTA A
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