EMLSAT00000010694, EMLSAT00000010694-706541 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010694
Unique NameEMLSAT00000010694-706541
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s709supercontigLSalAtl2s709:1022755..1023706 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010694 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010694EMLSAG00000010694-693460Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000047627EMLSAE00000047627-756555Lepeophtheirus salmonisexon
EMLSAE00000047628EMLSAE00000047628-756556Lepeophtheirus salmonisexon
EMLSAE00000047629EMLSAE00000047629-756557Lepeophtheirus salmonisexon
EMLSAE00000047630EMLSAE00000047630-756558Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780274auto780274Lepeophtheirus salmonispolypeptide
EMLSAP00000010694EMLSAP00000010694Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010694

>EMLSAP00000010694 ID=EMLSAP00000010694|Name=EMLSAP00000010694|organism=Lepeophtheirus salmonis|type=polypeptide|length=243bp
MWKVNKELFIAEVKKHKSIWDIGSAAYLKKEKRNEAWSLLCKDTGLSSHE
CRRIWKTLRDRFVREIKFIERKRASNSSDAEPTSTWNLFNQMEFLKNTIN
CRRIDKRSMRDDKKSSSDKKERSHSKAHPWYVNTFLINIDFQENIFYFPE
DEGDMTELPEPSSSEFQNYAEVSHNIIEEPQVLSHHREEEQKKRSSSGVD
KSKVYKNHNFLMYLNDKLNELEKDKRATAELMILELVTDIKNE
back to top

mRNA from alignment at LSalAtl2s709:1022755..1023706-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010694-706541 ID=EMLSAT00000010694-706541|Name=EMLSAT00000010694|organism=Lepeophtheirus salmonis|type=mRNA|length=952bp|location=Sequence derived from alignment at LSalAtl2s709:1022755..1023706- (Lepeophtheirus salmonis)
ATGTGGAAGGTAAATAAAGAATTATTCATTGCCGAAGTGAAGAAACACAA
ATCTATATGGGATATTGGTTCTGCAGCATACCTGAAAAAGGAGAAGAGGA
ATGAAGCCTGGTCCTTATTGTGTAAAGATGTTAGTATATTAAATAAAATT
ATGATTTGATTTATGTTATAATAATGAATTACAAATTACTATATTATTTT
ATAAAATTCCTCCCTACAGACCGGACTAAGTTCACACGAATGCCGAAGGA
TATGGAAGACTCTAAGGGATAGATTTGTTCGTGAAATAAAGTTTATAGAG
AGGAAAAGAGCGAGTAATAGTTCAGATGCTGAACCTACTTCAACCTGGAA
TCTATTTAATCAAATGGAATTTTTGAAAAACACCATAAACTGTCGGCGAA
TGTAAATACTTTATTAGTAAATTGTCGTTGCAACAATCATATATATAATA
TGTATTTTAACTTTGTTTTTAAATCATTACAGAGATAAAAGATCTATGAG
AGATGATAAAAAATCTTCAAGTGATAAAAAGGAACGCTCACACTCTAAAG
CGCATCCCTGGTATGTCAATACATTCTTGATCAATATGTGATGATACAAA
AGTTTAATCCTTCATTCTCGTTTTTATTCTTCAAAGTGATTTCCAGGAAA
ATATTTTTTATTTCCCAGAGGACGAAGGGGACATGACTGAACTTCCAGAA
CCATCATCCAGTGAATTTCAAAACTATGCTGAGGTATCACACAATATTAT
CGAAGAACCACAAGTACTCTCCCATCATAGGGAAGAGGAGCAGAAGAAAA
GGAGTAGTAGTGGTGTAGATAAATCTAAAGTATATAAAAATCATAATTTC
CTCATGTATCTAAACGATAAGCTCAATGAATTAGAGAAAGATAAAAGGGC
CACGGCAGAGCTTATGATCCTAGAATTAGTCACGGATATTAAAAATGAAT
AA
back to top
Add to Basket