EMLSAT00000010775, EMLSAT00000010775-706622 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000010775
Unique Name	EMLSAT00000010775-706622
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s713	supercontig	LSalAtl2s713:264014..268828 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000010775 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000010775	EMLSAG00000010775-693541	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000047993	EMLSAE00000047993-756921	Lepeophtheirus salmonis	exon
EMLSAE00000047994	EMLSAE00000047994-756922	Lepeophtheirus salmonis	exon
EMLSAE00000047995	EMLSAE00000047995-756923	Lepeophtheirus salmonis	exon
EMLSAE00000047996	EMLSAE00000047996-756924	Lepeophtheirus salmonis	exon
EMLSAE00000047997	EMLSAE00000047997-756925	Lepeophtheirus salmonis	exon
EMLSAE00000047998	EMLSAE00000047998-756926	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto775524	auto775524	Lepeophtheirus salmonis	polypeptide
EMLSAP00000010775	EMLSAP00000010775	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s713:264014..268828+

protein sequence of EMLSAP00000010775

>EMLSAP00000010775 ID=EMLSAP00000010775|Name=EMLSAP00000010775|organism=Lepeophtheirus salmonis|type=polypeptide|length=263bp
MNKFAVEDKVCLIVGGLSTLGVSLADFVHSRSAKVWITDTLSDPEGKEIL
SGKYKERWGYSTLDVRNKEQFEEAFEKCCNEFGRPDILFNLTQIFGEDDW
SNIYDVNVKGAYLGIELGMKFMNKSHNGNGGVVLNISSFVGVSCRGDHFA
ATPAFTSSQHAITALTRTFGSELYFERSGVRILSVVPYYFEGSKMVENGF
EALTSDLDARKHLQEAAKGKKFLTGEEASLKIINVLNAKNGSVWFIRPHQ
LQPINIPDNRLPN

mRNA from alignment at LSalAtl2s713:264014..268828+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000010775-706622 ID=EMLSAT00000010775-706622|Name=EMLSAT00000010775|organism=Lepeophtheirus salmonis|type=mRNA|length=4815bp|location=Sequence derived from alignment at LSalAtl2s713:264014..268828+ (Lepeophtheirus salmonis)
AAACAAGCAGGCCTGAAATCCCGTTCACCCGGTATTATATTATACACACG
AAGCACTCCTCATTCATGTTATGCCTCTGTGTCATTCAGTTGTAATAATA
ATATAAAGTGTATGTTGTATAATTAAAAATGAACAAATTTGCTGTGGAAG
ACAAGGTTTGCTTAATTGTGGGTGGCTTAAGTACTCTGGGTGTGAGTCTC
GCGGATTTTGTTCATTCACGAAGTGCAAAAGTGTGGATTACAGATACTCT
TTCAGACCCTGAAGGAAAAGAGATTCTCAGTGGAAAATATAAGGAGCGAT
GGGGCTACTCGACCTTGGACGTGAGGAATAAGGAACAATTTGAGGGTAAG
AAGGATTTTGTAAATGTTATAATATAACTGTGACCCCTCAACACAAAAGC
AATCCAGAATTAAAATTGCATTTCATTTATACTCTAAGAAAAATTATCCT
CAATTTATATTATCAAACTATTATGTTTAGTCTTTTGAAGATTCTGCAAA
TTACATTACTCATCGTCACAGTTAGAGAAATAGACAGATCCTACTTAAGA
GACCCCATATTGGGGCCCAATTAAACTTCATGAAGTTTAATTGCTATAGC
CAACATTATTGGCTATATCATCTCTTCCCAGAAATTTGGGTAGTAAGTCT
ATAACTGACTGAAATATTAGAGTTTATGGTAATTTCTCCTTTTCTTGAAG
ATTATTCTTATGTTGACGCAGGACACAATTCTACATCTTACCACTACAAT
AAAACTTTATTTTTAAAATTTAGAGGCCTTTGAAAAATGTTGTAATGAGT
TTGGAAGACCGGATATCCTTTTTAATTTGACACAGATTTTCGGTGAGGAT
GATTGGAGTAACATATACGACGTCAATGTGGTAAGATAATCTATGAATAA
TAATTAGCTATAATAAAAGATTTTGTCTTAAAATTTTTTTATTTATCAAC
AAATAAAATCTATAATTGAAGAAAGGTGCATATCTAGGAATTGAATTGGG
AATGAAGTTTATGAACAAATCTCGTAAGCCTCATAAATTATAATGATCAT
TTTAAATTATACTTGAAATCCTGTTTGTAGATAATGGTAATGGAGGTGTG
GTATTAAATATATCCAGCTTTGTTGGGGTTTCCTGTCGTGGAGATCATTT
TGCAGCGACGCCTGCATTCACATCTAGTCAGCATGCCATTACTGCACTCA
CAAGAACATTTGGAGTAAGTAGAATATAAGAGGATTGGACCATTTAAATT
TATGCAAGGACTTTTGTTTTTTGTAACATATATGCTCCGGTCATCAAGTT
AAAAATGTAAATTGAAGCAATGTTATTAGTTAAAGGCAACAAAGCCAGAC
ACAGCAGATGTATTCAGTAACTCTTTTTCTCTTTCTGGTGACGTCATTGG
GCGCATTTGTTTGGGTAAAAGTAACATAAAAAAGTAAAAACTGTAGTCTC
CCTTTAATAACTCAATTATTCTCCATTAATATTCCTCCTGTATTTGGGGT
CCCAATGACGTAAGGCTAGTAAATTCTGAAAATCGTTGCTGACTGACCTA
TTTATAATAAAATTGAATTAAAGTCCAGGATATCATAAGTTATTGGCTAA
AGTTTAAGTAGAGTCTTAGCAGGGCGTTACTTCAAAACATCAAAATGTAC
ATTGTATTTTGTTGTCAGCTGTCCATCTTTCTCCTTACTGTCCCCTTATC
CGTATTCTGAACATTGATTGGTTGAATTTGAATTAGCTCATGTTAAGCTG
TTAACAATTCTCAACAACTACANCTAAGCATTCAAATTCAGGTCTTGGAA
CGTCTGCCGGCTATACCCCMAATGTATTATTGTTGCTTAAGCCATAGAAC
ACGAAAAATATTGTTAAAATATTTTACCGTAATAGGTTTGCCCTTCAGAA
CCTTTGTTTTAAATCACGTTTTTAGATTATTGTTACGATTCAAAGCTAAA
TTTCGACATGAAAAATATAACTTATATATTAAGCGAATTTCTGTGAGTGT
GTTTGTCCAAGAATCACATCTAAACCAATGAATTGGATTTTGGATAAATT
TGTCATGTAGGTTCTAGTTACAATTTTTTGCCGTTCAAGACAAACAACCG
ACTACTTCAAAACTACTAAAAAAAATTAAGACCCTAAAATTCTCTAAGAA
TTATTCTTGTTGTATGTTTATAAGTATTTTGTCATACTTTTTTTAAAGGA
ATTATAAGCTATAAGGTTCAGAGAAAAAGGAAGAGTGAATAGGACAAAGG
ATTTTTGACAATTATATGGAAGATGAGTGAACGATAACTCTGCTCGAATA
TTTTTTCTTCTATAAACCATATAATCTTATTTAAAAAGAAACCAAAAGAG
TTCCAAATAAATCTTGATTTCTTAATGCCCGAGGAATTCCCGAGCAACGC
CGGACAGACCTACTCTATATCATTATAAAAAAATAGTTCAAAGATCCATC
TAACACCAATTTTCAGCGGAAATAATTCTTAAAATTTTAAAATCTTTATT
TTTTCTTTTATATTAAGCAGAAAAATTCTTAATTAATTGCCAATTTTTTA
ATGTCCCGAGCACTGCCGGGCAAAATCTAGTATATAAGAAAATGAAAAGT
AATAACAATTAATAAAAAATATTCCAGCCTTCGAAAGATAAAATATTTAT
TAATTTATTTTGAATACAGTTCTTACAAAGTGTGTCTAATTATACAAAAA
CCAAGTAAATAGAAGGATCATATTTGGAAGTTTCTTTTTTTTATTGCTTT
AAATTATAGCTCAAACTAAATAATAAACCTTATACTACAACATAAAAAGA
TTTTCCGGGAAGAAAAAAAAATCGCTTTTGATTGATTTATTCAGTCAAAC
TTTAAATTTTCTTATAGAATATTCAAACAAAATAAGCTTTAAATTAGGTT
GCATTAATTGTTTTGAAATTAAATATAAATAAGTGGATTAATTATTGAAA
AATATATAGAATTGTCTAATGATTATTTGTTTTCTTTTTTTAACGATTAG
ATTTTAGTAATATTTTATTAAAANGTTAGCTATACATTTGATTTGTATAT
GATTTGATTTGACAAATTTTTTCATTGAAATAATAACATAGGCAATATAT
TATATACAACCGGATTTCTGTCCTTTTGGAAACGGTTCATAAGTAGATTA
AAATTATTACTTCGTTTTCCAAGTGAATAAATCATAAAATTGCCCTGACT
TGTCAAGTGAGACAAGATAATCGACAGTTGACAGCGAAAGGTGTGTTTGT
GTTAGCTAGGTAATGCCGTGTCATTGAGTCACTCTTTATGTTTATAAATA
TTAAATGATAAAAAGATATTTAAAAGAACATTATTGATTGTAAAAAATAG
TTATAAATATTCCTTTGGAAGTCAATGTTACTCAGACTTTGTTTAATTTC
CATTCAAGTAGCTTATTTTATGGACATATACTTTAAAATTCCATAGATAT
CATTTAATTAATTCGTTTTATTTTATTATAGAGTGAACTATACTTTGAAC
GGTCCGGAGTTCGAATCTTATCGGTCGTACCATATTACTTTGAAGGATCG
AAAATGGTTGAAAATGGTTTTGAAGCTTTAACATCGGATCTCGATGCGAG
AAAACATCTTCAAGAAGCTGCAAAGGGGAAAAAATTCCTCACGTAATAAC
CATTTAGCAATTGTAGGGGCAAGCTTGAATCCGTTCACGCTTTTGCGTGT
ATCCGTTCATTTCTGAAACATTTGTTGATTTTTTTACTGTTCTTTTTAAC
GTTAATTTGTTCATTTTTCTTTTCTTTTTAAAAAAAAATGTAGATCAGAT
GATCAATTTTGCATCATCCGAGTTGCTACGAAAAACTATTGTAAATACCG
CAGATGACGTCACTTAGTCATTTGAGCTTTGCTTACTTATACTCAGAATT
TTTTTTTTGTAAAAGTGCGAGGAGAAGGTGGGAGAAAGTCATCTGGTATT
ACTAAATACCAGATGACTTTTAAATGCTTTTGGGGAGCGAAAATGAATTT
CTGCTATCAAGAGGAGAACTCTTTACATCTAATCCAGCATTAACGCAGTG
AAAATATAATTATAATTTATTATGCATTTTTAAATCAATTTATATTAATG
TTAGCGGAGAATTCTGTTTTTTAGAGGTAGATGTTAACAAAGCCACAGCC
TATTAAATTATGAAGGAAAAAGACGAAAGAGCACACGCATCAACTGTTTT
TCCTTTTCTAATTGCTATCCTTAGTTTTTTCTTCACAAAGATCCCTTCTT
TACGTATATTAGTTTGAAAACAATGCAACAGAGAGTAATGCAGTCTTGTG
GAAAAAGAATGCTACACTCTGAATGATAATATTATTTGATATAAAATATG
TTATTCACATAGATCAATAAAAATGAAGCCCGTTCAATGTTTTAGATTTT
TTTGTTTAAACTTTTAAATATAAACGGAAAGCATGCACGGTGTTCATTTT
TACACTCATATGGGTACAGACTAGACTCTATTTTAATGTTTGATTGTTTT
TATAGGGGTGAAGAAGCATCCTTGAAGATTATCAATGTGCTTAATGCAAA
GAATGGTTCTGTTTGGTTTATACGGCCTCATCAATTACAGCCCATCAATA
TACCAGATAATCGATTACCAAATTAAAGTCATGCAATCAATGCCATCATT
CCAACTTTGCCGGACATTTTATTTATTACTTTATGCAAAATACTATGTTA
ATTTAGATTAATTATTAAAAAACGTTGCTCAATACATAATTTTGATTTAA
TTATTTGATGACATTATTTATTTAAAGTATAATAAAAAGAATTAACCAAA
CTGGATTTCCGTGAC

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