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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s71 | supercontig | LSalAtl2s71:248776..254023 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000010829 >EMLSAP00000010829 ID=EMLSAP00000010829|Name=EMLSAP00000010829|organism=Lepeophtheirus salmonis|type=polypeptide|length=407bp
MFLIITIVTVVIFSLLYFYLNRRHGYLEKLPFPQEKPFLCFGSPPFFWHD
YIHHKYYTEAFKRFKSKTFTRYSGSTPTICTIDPNFIKQITIKQFNNFHM
TFFADVKDKNLSLDVSHGALWKLLRKELSPIFTSGKLKGMMEPVTEIADK
FISYMDNQSSEVKSIKIKEKFQGLILDIIDACAYGIKTNSSQXPDHELLK
TSKKLLENAIIMNNIPKCMILLLFNLFPGMIGYMNIQVANSIIDSRESGN
IKKKDFINVLVEMRKNNLENPNELLNKEIITAQAVLFFVAGYAXTSISLC
NLIFILATNPEIQEAIYKEIVSSKDEDFDEHSYTSAIIPNTFRPFGDGNR
ICIAYRFAMMELQIILEKLVKKFQILPTHETKMTLTKGALFLFDTDDIGV
QFKSRDH back to topmRNA from alignment at LSalAtl2s71:248776..254023+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000010829-706676 ID=EMLSAT00000010829-706676|Name=EMLSAT00000010829|organism=Lepeophtheirus salmonis|type=mRNA|length=5248bp|location=Sequence derived from alignment at LSalAtl2s71:248776..254023+ (Lepeophtheirus salmonis)
CTCATGAATCACTGAGAGTTACACTGAGTGGAGCTATTAGTGTAAGTCCT
TGTTTGACTAAGGGGAGAATTGAGGATTGATATTGGAATAAGGCATAAAA
TTATTATTTTAATTATGCATATATGGGTTGGGATTTGAGTTTATTTACTT
CCTCTCACAGGTGCTTGGAGTAGATTTAATAAAACGTCATCGCAGCTACA
CTACTCTCCTATCAATTGATCTATTTATTTATTGNATCCATTTWTATTTA
TAGGAAGAATTTTATCAAGTCTAGAAGTTATTAATGAATTAAAAAAATAG
CTGATGTATGAATTTCTATTTATTTATCATGTTCAAGTAAAGTAAGGTAA
AGTAAAGCGTACCTTGGTTCTACCTGTTACATATCTAAAATAAGCCTGAG
GCACTACAGTAATTACTAATGAGGATCAACATTTAAGACCAAATGCAAGT
TATTAGATAGTCGTGAGTGCATGATGATATTTATATTATAATTAACATAC
TATCGTTACTACCCCACATATAAATCAATCAATGTCATATTATTTATTAA
TGCAAGATGTATTCTATTTTTTAAGTAACATTAAGCACTATATATATTCT
AATTAGACAAGACAGAGAATATAAAATAAAATAAATATAACTGAAGTCAA
ATACCGATACACTATGATAAATGATGATCCTTATAGTTAGTTTGTCAATC
ATAATCAATATTTGAAAATTGATGAAATGGTAGAACTTCAAAATTAATAC
TTAATGATCAAAAGATGATATTTATTTATATAAGTTACNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNATCATAAGTCTTCTTATAAATACCTGTGGATTGTGTAAGTT
TGTCATAGAAGTCATGATTATGTATTAATTAGAATATATAGGTGGTCTTA
TTAAATTTTATCCTAGCCTTATTCCCCCATTCTCTTCTCTCCTCATTTCT
CTCGGTCCTCCTGGATTCCTTTATTTAATAGTTTGTGTCTTTTCAGCCTC
CTCAAGACACAACGACTTCTATCAAACATATTTTTGTATTTTAGGTTAAA
TTTCAGGAKAATACACGATCATGGTAAATGAAAAAAAAAAATAGAGAGTA
ACAACCTGTGTCGGTCTCCCCATCAGATACAATTATATCTATGAATTATC
TTCTACATAATATAATAGGCATAGGCATAGCCCATAGGCGATGTTGTGTA
AAGGAGAGCCCGTAAACTTGAAGAGGGTGTTTTTACGAGGAGTGGGCAAT
CTACAGAAAGTCACTGAACTAGTATTTTAATACGTAATTTATTTTTGGAC
TGCTGTAAAAACAAATATAATAGTAACAATTATTTTGTAGACGTAAAAAC
TTCTGTAAAATAAATAAAAAGTGATGTTTTTGATTATAACCATAGTCACA
GTGGTGATTTTTTCTTTACTATACTTTTATTTAAATCGTCGCCATGGATA
TCTGGAGAAGTTGCCTTTCCCTCAAGAAAAACCATTCCTTTGCTTTGGAA
GTCCACCTTTCTTCTGGCATGACTATATTCATCACAAATACTATACAGAG
GCCTTCAAACGTTTCAAATCTAAAACATTTACTAGATATTCTGGATCAAC
TCCAACTATTTGCACTATTGATCCTAATTTCATAAAACAAATTACTATAA
AACAATTCAATAATTTCCATATGACCTTTTTTGCTGGTAAGTATTTGATT
TGATTTTGGATCGTTTTCAAGAATAAATAATGCGATTATGGAAAACAAAA
TATCGATTTACTCTTAATTAGTTATTACAATATAATTTTAAATGAGAAAC
TTAAAACAGTTAAATTAACCCAGTATAGTCTGAACCTTGGCATTAATGAA
GAACTTAATATGTGTACACGGATATGAGGCTTGGTGATTGAACGGAAAAA
GGAACGACGTTCTAGCTTTTCGTTCCGTTTGAACAAAATAATGATGAACA
GGAAACAAATAGTGAGCGCACTTTGTTGTTCGAAAAACTGACTTTATAAA
CTATAGTCCTTCTTGCTTGCTAATAGGTTTGAAATTCCAAAACGGAGAAT
AAATTATTAAAAAATGTTTATACTTTTTTGAATGTATACTGAAGAATATT
TTTTTTATTTTTACATCCCTAATAATTATTGTCATTGCTATTTACAGAAA
TGCCCTCTTATCAGGGTAACTAATACAATATCTGCAAAATATCATATAAA
TTTAAGCTCTCAAGTCTTACTTATTATGACCAGGGCTCTACTTGCAGAGG
CTCCAGAACGTAAATACAGTCAAATCTATATTTTGTAGTCAGGTAAAGGA
AACTGAAAAAGTGACTACTTAATGCAGGCAACCTCCTAGACCAGGTTTCC
TATTTTTTAACCATTCTAAATTTGAAAACTGGATATCCTCGCTTATTGCA
GTAGTACACTTAAATCAGGTAGTTGTTAGACTAGATTTCACTGATTTTTG
TAGAAATTAACAAGGATACTATTATGGAAAAGTTTAATAGTATACATGTA
TATTGACAAGCCAAGTAACAATGAAATAAATATAAAGCTCACTCTTTTTT
CTTACTTGACGGGAGTATTAAGTATTTTTTTCAATATTAATAGAGTAAAT
ACCGTAATTTTAAACTTTAACAGCTCACAGATTACATATTTAAAAAAATA
AGTGAATTATTTTATTAAAAAGTTTAACCATTACATAATTATCATTTCAA
TAAAATAGAATATGTTTTATATATTTTTTATTTAACCCAATTTTTATAAT
GAAATACTTATACTATCTATAGTATACACTATAATACAGTTTACATTCAA
ACCAATTTCTGCAAAGGGGCAAGAGCATATCAATTTCCTGACTAACTTTT
GCCACCCACTCCGCTCTTATCAATCTAATTGCATCAAAACTATGCACTAT
CTTATTTTATTTTTTTGCTTCTGAAGCTAACTGCCAACTTCATTGAAATA
TAAAGATGGTTAAGTACTTCAAAAAATTATTCAACTACTATTTTTTTCAC
CAAAGATTGATTGTGTTGTGAATTAACTCCATTTTATCTTTCGTGTGAAG
GTATTTATTGTACATCCTTATACATATTTTTTGATTTTAAAGGTAGGTTA
AATTGAAAATACATTATTTTGCACTTGAATCAAAATAAGGGCACATCAAA
ACAAAATATTGTTCTATATTCATTTCCCTGGTGAAGCTTCGAAATGACTA
GATTTATTACACTGTAGTAGTGGGAATATTTWTTCTTACACAAAATTTTC
TTRTTTTATTCRCCCCCCCCCCCTCCCCCCGCATTTCAAAAGTAAACGAG
AAACGGAAACTTTTCAGAAAATGAACGGAAAAAGGGTGCACAAGCCCAAG
TCTGATGGATATGGAGCTGAGGTATATAGAAAATTCACACCTTTTTATGG
TTTAAAACTCGCTAAATAAGAATACCAACTAACAGCATGTAACCCAATTA
CTAATCCTTTTTTGTTTATAAAAGTAACGTGATTCCAAATTTTTGTTCTA
GCTAAAAGTCAAAGTTTTATGCCATTATACGTCAATTTCCATTATTTCAA
ACACTGAGACTTTCAAGTTCCAGGGTCTACTGTACTTAAAAAAAGTGCAA
TTAGGTGATTCACGACGTATATACTATTTGATTTCTCAGACTGTTAACAC
TTGTTCATATTACTCCATGATAATGGAGAATTAAGATCAACAAAGGATAA
TATAGCACCATTATAATTTAATGAAGTTGGTTTAAAAAAAGTAAATTTAA
ACTCTTATAGTTTAAAAAATTTACAATACGACTTTTAGTTATTTAAAAAG
AGCAGGTAGCAACATGTTTTAGATCCAATTGAAAATTATACCATAAGTGT
GGATAATATATCATGGCTTCCATTAAATAATTATGTCCATAATTCATTTA
CATAGTATAACAAGTGGCATTGTACCTATATTATTCATTTCATTTTTGTT
TATTCTAGATGTGAAAGATAAGAATTTGTCGCTAGATGTATCTCACGGGG
CTCTATGGAAACTTCTTCGTAAAGAGTTGTCTCCTATATTCACATCTGGA
AAATTGAAAGGGATGATGGAACCTGTTACAGAAATTGCAGATAAATTTAT
ATCTTACATGGACAACCAATCATCTGAGGTAAAGTCMATTAAAATTAAAG
AAAAGTTTCAAGGATTAATCTTAGATATAATTGATGCATGTGCTTATGGA
ATTAAAACCAATTCTAGTCAAGAMCCAGATCATGAGCTCCTAAAGACATC
AAAGAAATTGTTAGAAAATGCCATAATTATGAACAATATTCCAAAATGTA
TGATATTGTTACTTTTTAATCTTTTTCCTGGAATGATTGGATACATGAAT
GTATTTGGAAAGGCATACGATGATTAGATTCAAGTAGCAAACTCTATCAT
TGATAGCCGGGAATCAGGAAACATAAAAAAGAAAGATTTTATTAATGTAT
TGGTAGAAATGCGAAAGAATAATCTTGAAAATCCAAATGAACTACTCAAT
AAAGAAATTATAACTGCTCAAGCCGTTCTTTTTTTTGTAGCAGGCTATGC
TARAACATCCATTTCATTGTGTAACTTGATTTTCATCTTGGCAACTAATC
CTGAAATTCAAGAAGCAATTTATAAAGAAATTGTATCTTCAAAGGATGAA
GATTTTGATGAGCATTCTTATACATCAGCTGTAATAAAAGAAARGCTTCG
AATGTATCCACCGGCGACATTGCATGCTAGAYTATGTACTKACGATACTG
AAGTAGAAGGAGTATTTATAAAGCAGGGAACGTTGATTGAAATGCCAATC
TATGCCTCACATTTTGATTCGGAGTTCTTTCCTAACCCTGANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTTTAAAC
CTGAACGATTTTTCAAAGAAAACAATTCAGAGATAATACCCAATACATTT
CGGCCCTTTGGAGATGGAAATCGAATTTGCATTGCTTATCGGTTTGCAAT
GATGGAGCTACAAATTATACTAGAAAAATTGGTTAAGAAGTTTCAAATTC
TTCCCACACATGAAACCAAAATGACACTAACTAAAGGAGCATTGTTTCTG
TTCGACACAGATGATATTGGAGTTCAATTTAAATCAAGGGATCACTAA back to top
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