EMLSAT00000010860, EMLSAT00000010860-706707 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010860
Unique NameEMLSAT00000010860-706707
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s721supercontigLSalAtl2s721:316156..319851 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010860 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010860EMLSAG00000010860-693626Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000048470EMLSAE00000048470-757398Lepeophtheirus salmonisexon
EMLSAE00000048471EMLSAE00000048471-757399Lepeophtheirus salmonisexon
EMLSAE00000048472EMLSAE00000048472-757400Lepeophtheirus salmonisexon
EMLSAE00000048473EMLSAE00000048473-757401Lepeophtheirus salmonisexon
EMLSAE00000048474EMLSAE00000048474-757402Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776283auto776283Lepeophtheirus salmonispolypeptide
EMLSAP00000010860EMLSAP00000010860Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010860

>EMLSAP00000010860 ID=EMLSAP00000010860|Name=EMLSAP00000010860|organism=Lepeophtheirus salmonis|type=polypeptide|length=1022bp
MSTSDCEEEEADDCCDLYSRIDSSSDMDVNAASNANRLGNHSINHPHVHS
QSSHKQPSSSAANKHHLHSANYVNLLNHHHHHHHHNLHNYKQQNEGLDDS
SSSLRRSTGLVASSSSSNGNNIDSNAYSQSSLSRRDKSRSCPRAQQHGGG
RKSRSRDRADVIDNKSSMITGNSSTTPGGGGDCIITEREKELELIHRRSR
ELLLTPRIMNCRSRDGSMDRYDGKGSLPRSPGASVSSSGVSSSKPPPLPP
RLHSPMNNNNNNTSQSGRYKSPSPCAPGSGXYHHQHNHLYLHRHHHQPQP
PXPPPQSNQAPPPPYRQSLRRRVQSPNRRDFKDFSNPRSRDLRSPMKHIR
SYLDEEEDSGADSLGNDQPGSPCVGCCSNDKSSSGGNNNALVVYDHHRSD
SSPPMCCESYCPIISHHPSPSLSIEVEERLRCLEGDKDTLHMQVAVLSRQ
IDGQTNKIYDLEKVLDDKKDVLRKTEDVLSREMLSRSSLETKKLELLSEI
ANLKLKQXATERENTDLRTKLEYVTKYPPEPSHVFAPSLFGTTPRRPRAR
SSNNNKTPSLPLETHFDYEENERSRRAPPPSSCHRRSPPSHGGSAPNLVA
LSERKTXTSTFKRNYSRNSVEKAVVSSVVXNPIATKPKGLKKIWGKMRRS
NSGNLIEQEHSANENNAPSHNNGGNESRNXSSSTNSNNTNRNSGGEDSKY
RNSGGSRFAGWMMSGLPESHLPFRQWKVDTIISWLDHLGLYMYSSEVRKH
VKTGDDLLKMVISNVTSEPIPPIRIKHVLHRKKLVLALNAKAESEVDDLA
GRLDHHWVVRWLDDVGLPQYKDTFLEARIDGRVLNFLTVEDLFHLKITNM
LHHLSLRRGVQVLRSSKFEPGCIKRRADPGDDKDRYSSPTEVTLWSNHRV
MEWLRHIDLAEYASNLRGSGVHGALIVFEPKFNAELMASLLSIPVNKSLL
RRHLTLHFRNLVGRDRMIEKREAQEANNALLTPTAKVKTQKKNQFPLARR
KKSKHELDLDDLICPMEEDDEE
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mRNA from alignment at LSalAtl2s721:316156..319851-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010860-706707 ID=EMLSAT00000010860-706707|Name=EMLSAT00000010860|organism=Lepeophtheirus salmonis|type=mRNA|length=3696bp|location=Sequence derived from alignment at LSalAtl2s721:316156..319851- (Lepeophtheirus salmonis)
ATGTCAACAAGCGACTGTGAGGAAGAGGAGGCAGATGACTGCTGTGACCT CTACAGTCGAATAGATAGTTCTTCAGACATGGATGTCAACGCCGCGTCTA ATGCCAACAGACTCGGGAACCATTCAATTAATCATCCTCATGTCCATTCA CAATCTTCTCATAAACAACCCTCTTCCTCAGCAGCGAACAAACATCATCT TCATTCAGCCAACTACGTCAACCTCTTGAACCATCATCATCATCATCATC ATCACAACCTTCACAACTACAAGCAACAAAATGAGGGATTAGACGATTCA AGCTCCTCACTTAGACGCTCCACCGGACTAGTTGCCTCCTCCTCCTCCTC TAATGGCAATAACATTGACAGCAATGCTTACAGTCAGTCCTCGCTTTCAC GACGAGACAAATCACGGTTTGACCCTTAAAACCTTCCTTTTTTGTTTATT CACTTGAAGGTTGCATTTCATTGACAAAAATACACTCAACCTTTTCATTC TAAAGATTTTGCGTTCAATAGCTCCTATTTTTCATGACCACCACCAGGAA TCAACCCCATTCAATTATTGTTCAGTTTTATCGTTATTATAAAAATTTTT TGCATTTATCTTGAGTAAATTATTATTATTTATTATTCKCTCATTGCAAA AAAAAAAAAAAAAAAAAAAAAATAACATATACGTAAGAATTGTTGTTTCT TTCGTTTTCACTTAATGTCTTGGTTTATTGCCAGGAAAAAAATCTTGTAG ATATAGTTATATATACATATATAATTTAGAAATGTTTTTTATTTTAATCT TTGTAATGATTTAGATCATGTCCTAGAGCACAGCAGCATGGAGGAGGGAG GAAAAGCCGATCTCGTGATAGAGCGGACGTAATAGATAACAAATCATCAA TGATTACTGGGAACTCTTCCACAACCCCTGGAGGTGGAGGAGATTGTATC ATCACAGAGAGAGAAAAAGAATTAGAATTGATTCATCGACGCTCCAGGGA GCTTTTGTTAACTCCACGAATTATGAATTGTCGCAGCCGGGATGGAAGTA TGGACAGATATGATGGAAAAGGGAGTCTACCTCGATCTCCTGGTGCAAGT GTGTCTTCTTCCGGAGTCTCATCATCAAAACCTCCTCCTCTACCTCCAAG ACTCCACTCTCCTATGAATAATAATAATAATAATACCTCACAGTCGGGAA GGTAAATTTGGAATCTAGTCTGATCTTTATTAAATTAGATTTTATCCTAT ATAGATACAAATCTCCGTCCCCTTGTGCACCTGGAAGTGGCTAKTATCAT CACCARCACAATCATCTTTATCTACATCGCCACCATCATCAACCACAGCC KCCGCKSCCGCCACCACAATCTAACCAGGCACCTCCACCTCCATATCGAC AATCATTGAGACGACGGGTTCAATCCCCCAATCGGAGGGATTTTAAGGAC TTTTCCAACCCTCGATCTCGTGATCTCCGCTCTCCCATGAAACACATCCG TTCCTATCTTGACGAAGAAGAGGATTCAGGAGCTGATTCCTTAGGAAACG ACCAGCCAGGATCTCCTTGTGTTGGTTGCTGTAGCAATGACAAAAGTAGC AGTGGCGGAAATAATAACGCCCTCGTTGTCTATGATCATCACCGTTCAGA CTCGTCTCCTCCTATGTGCTGTGAATCCTATTGCCCCATTATATCTCATC ACCCTAGTCCATCATTGTCCATTGAGGTTGAAGAAAGGCTTCGATGCTTA GAAGGAGATAAAGATACTCTCCACATGCAAGTAAGTACTCTGGATATTTG CATACCCACTCTATTTAACTTTATATCTTCCTTATAAGGTCGCTGTTCTA TCCAGACAAATTGATGGCCAAACTAATAAAATCTATGATCTTGAAAAAGT ACTAGACGATAAAAAGGATGTCCTACGGAAAACGGAGGATGTTTTGAGTC GAGAAATGCTGTCGAGGTCCTCTTTAGAAACTAAAAAACTCGAACTATTA TCAGAAATAGCAAATTTAAAGCTCAAACAASCAGCCACTGAAAGGGAAAA TACAGATCTTAGAACAAAATTAGAATATGTGACAAAATATCCTCCTGAGC CCTCTCATGTTTTTGCGCCATCCCTTTTTGGAACTACACCTCGGAGACCT CGAGCAAGATCTTCAAATAATAATAAAACTCCATCACTACCTTTGGAAAC TCACTTTGATTATGAGGAAAATGAAAGGAGTAGACGAGCACCTCCTCCCT CCTCATGTCATAGAAGGAGCCCTCCTAGCCATGGAGGTTCAGCACCAAAT TTGGTGGCTTTGAGTGAGAGAAAAACASCCACCAGTACCTTTAAACGCAA TTATTCACGAAATTCTGTGGAGAAGGCAGTTGTCTCTTCTGTGGTTAGKA ATCCGATAGCAACAAAACCAAAAGGACTGAAGAAAATATGGGGGAAAATG CGTCGCTCAAATAGCGGAAATCTCATTGAACAAGAACATTCTGCGAATGA GAATAACGCACCATCTCACAATAATGGCGGGAATGAATCTCGGAACRCCT CCTCATCCACAAACTCAAATAACACAAACCGAAATAGTGGTGGGGAAGAC TCTAAATACAGAAATAGTGGAGGYTCTCGTTTTGCTGGATGGATGATGTC TGGTCTACCAGAATCACATCTACCGTTTCGCCAATGGAAAGTGGATACAA TCATATCTTGGTTAGATCATTTGGGGCTTTACATGTACAGCTCTGAAGTA AGAAAGCACGTTAAAACCGGAGATGATTTGCTCAAGATGGTCATCAGCAA TGTAACATCTGAACCAATCCCACCAATAAGTTCTTGTNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNGGGTCCGATCTTGAAATCAAATTAGGGA TCAAACACGTTTTACATAGGAAAAAGCTTGTTTTGGCGTTGAATGCAAAG GCTGAGAGTGAAGTTGATGATTTAGCTGGAAGGCTTGATCATCATTGGGT TGTCCGATGGCTTGATGATGTTGGMCTCCCTCAGTACAAGGATACATTTT TGGAGGCACGGATTGATGGACGTGTTCTCAACTTCTTAACAGTGGAGGAT TTGTTCCACTTAAAAATCACAAATATGCTCCATCATCTCAGCCTCCGTCG AGGAGTACAAGTTCTTCGATCCTCAAAATTCGAACCTGGGTGTATTAAAC GTCGTGCTGATCCAGGAGACGATAAAGACCGATACTCATCTCCAACAGAA GTGACTTTATGGTCAAATCATAGAGTCATGGAATGGTTACGCCACATTGA CCTTGCAGAGTATGCCTCTAACCTCAGAGGATCAGGTGTCCATGGAGCAC TCATAGTATTTGAGCCAAAATTTAATGCAGAGCTCATGGCCTCACTTCTT TCTATACCTGTTAATAAGAGTCTTTTAAGAAGACACTTGACTCTACATTT TCGTAATCTAGTGGGTAGGGATCGAATGATAGAGAAAAGAGAGGCTCAAG AAGCAAACAATGCACTCCTTACTCCTACAGCCAAAGTTAAAACTCAAAAA AAGAATCAATTTCCATTGGCGAGGCGTAAAAAGTCCAAGCATGAATTGGA CCTTGATGACCTCATTTGCCCCATGGAAGAAGATGATGAGGAATAA
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