EMLSAT00000010937, EMLSAT00000010937-706784 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010937
Unique NameEMLSAT00000010937-706784
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s732supercontigLSalAtl2s732:148989..150022 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010937 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010937EMLSAG00000010937-693703Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000048878EMLSAE00000048878-757806Lepeophtheirus salmonisexon
EMLSAE00000048879EMLSAE00000048879-757807Lepeophtheirus salmonisexon
EMLSAE00000048880EMLSAE00000048880-757808Lepeophtheirus salmonisexon
EMLSAE00000048881EMLSAE00000048881-757809Lepeophtheirus salmonisexon
EMLSAE00000048882EMLSAE00000048882-757810Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773294auto773294Lepeophtheirus salmonispolypeptide
EMLSAP00000010937EMLSAP00000010937Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010937

>EMLSAP00000010937 ID=EMLSAP00000010937|Name=EMLSAP00000010937|organism=Lepeophtheirus salmonis|type=polypeptide|length=243bp
MKSFALICSVFIGVSLATKEFKEFKEICGIENVATSDRIINGIEASPNQF
PWAVFIKVHIGHQIGTCTGSVISKNFILTAAHCLQGVSKAEIYAGTHDYS
LESEPHRQYRVSENLHVHPNYVNTLFTYQNDIGLIELDEELEFNDFVRPA
CLPTLADVDTNLVGENTTISGWGRIRGEPNPLIVPQLMYATDVPVMSNDV
CRXSYGSIINEKIICLNGYSVQKFTCNGDSGGPLNHEVSEGKY
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mRNA from alignment at LSalAtl2s732:148989..150022+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010937-706784 ID=EMLSAT00000010937-706784|Name=EMLSAT00000010937|organism=Lepeophtheirus salmonis|type=mRNA|length=1034bp|location=Sequence derived from alignment at LSalAtl2s732:148989..150022+ (Lepeophtheirus salmonis)
CTTACATATAAATATGTCAAATATTAATTTGCAATACATCATTTATCAAG
ATGAAGTCCTTCGCCTTAATTTGCTCTGTTTTTATTGGTGTTTCCGTAAG
ATATTAAAAATACTTATTATAATACATTAATATAGTAATTATATGCCACT
TTTTATTATGTGATTGTAGTTGGCAACCAAGGAGTTCAAGGAATTCAAGG
GTATGAAGAAMACTTACTATGATCATATTATGACTTAAATAACACTATAT
TTTTCCAATAGAAATTTGTGGAATTGAAAATGTCGCCACTTCCGATAGAA
TCATCAATGGAATAGAGGCATCCCCTAATCAATTCCCATGGGCTGTTTTT
ATCAAAGTCCACATTGGACACCAAATCGGAACTTGCACTGGCTCCGTCAT
CAGTAAGAACTTTATTTTGACTGCTGCCCATTGCTTACAAGGCGTTTCTA
AGGCTGAGATCTATGCTGGTACCCATGACTACTCTCTTGAGTCTGAGCCA
CATAGACAATACAGAGTGAGTGAGAACTTGCATGTTCATCCAAATTACGT
CAACACTTTATTTACCTACCAAAATGATATTGGACTCATTGAGTTAGACG
AAGAGTTGGAGTTTAATGGTAAGACAAATACAGAAACTCTGACTTCTTCA
TAAAAATCCAAACATTAACATTATTTTTAGACTTTGTACGACCTGCTTGT
CTTCCAACCCTTGCCGATGTGGATACTAATCTTGTTGGTGAAAATACCAC
CATTTCTGGATGGGGAAGAATAAGAGGTGAACCAAATCCCTTAATAGTTC
CTCAACTCATGTACGCCACTGACGTTCCTGTCATGTCAAATGATGTATGT
CGTKTGTCATACGGTAGTATTATCAACGAAAAAATCATTTGTTTGAACGG
ATACTCTGTTCAAAAATTTACATGCAACGTAAGTTTTGTATTTATATAMT
TTTTTAGTYTAATAATCCAMTTTAAATTACGTTTAGGGGGACAGTGGTGG
ACCTCTCAATCATGAGGTATCTGAAGGAAAATAC
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