EMLSAT00000010953, EMLSAT00000010953-706800 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000010953
Unique Name	EMLSAT00000010953-706800
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s734	supercontig	LSalAtl2s734:39513..44406 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000010953 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000010953	EMLSAG00000010953-693719	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000048963	EMLSAE00000048963-757891	Lepeophtheirus salmonis	exon
EMLSAE00000048964	EMLSAE00000048964-757892	Lepeophtheirus salmonis	exon
EMLSAE00000048965	EMLSAE00000048965-757893	Lepeophtheirus salmonis	exon
EMLSAE00000048966	EMLSAE00000048966-757894	Lepeophtheirus salmonis	exon
EMLSAE00000048967	EMLSAE00000048967-757895	Lepeophtheirus salmonis	exon
EMLSAE00000048968	EMLSAE00000048968-757896	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto770247	auto770247	Lepeophtheirus salmonis	polypeptide
EMLSAP00000010953	EMLSAP00000010953	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s734:39513..44406-

protein sequence of EMLSAP00000010953

>EMLSAP00000010953 ID=EMLSAP00000010953|Name=EMLSAP00000010953|organism=Lepeophtheirus salmonis|type=polypeptide|length=337bp
MIELQHAACQILYDKYNVERIGSRNMLSGAVWPNNIVPYEIGPGFSDGNL
DIVKSAMREIESRTCVKWSPRNSEKSYVYISNDKNGCYANLGYNSNRQKH
LLNLQKWDGYSSCMVEGIAVHEMFHIMGYAHEQNRPDRDEFVKIHWTRII
RRYVHNFFRSINPGEADVPPICNSWSNATTFDNCYSGYETETFGYRYDYG
SIMHYGLWDFRKAKDKVMDTTKRVSPGVKIDCSKESVLCPYLKISCDSKY
MQGKCPKKCGLCSTTPNPTTTTTRAIENCLDISTLCQHLKDKCSFSFMHK
SCRRTCGMCPPDQVATATTKPTKANTTAKPIKSYTVK

mRNA from alignment at LSalAtl2s734:39513..44406-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000010953-706800 ID=EMLSAT00000010953-706800|Name=EMLSAT00000010953|organism=Lepeophtheirus salmonis|type=mRNA|length=4894bp|location=Sequence derived from alignment at LSalAtl2s734:39513..44406- (Lepeophtheirus salmonis)
ATGATAGAGCTTCAACATGCAGCATGTCAAATTTTATACGATAAGTATAA
CGTTGAAAGAATTGGATCCAGAAACATGTTGAGTGGTGCAGTGTGGCCGA
ATAATATAGTTCCTTACGAAATAGGTCCTGGATTCAGTGATGGTAATTTG
GATATTGTAAAGTCGGCAATGAGGGAGATTGAATCTAGAACGTGTGTTAA
GTGGAGTCCACGAAATTCTGAGAAATCTTACGTTTATATCAGTAATGACA
AAAACGGTTGTTATGCTAACCTTGGTTATAATTCCAATAGACAGAAACAT
TTGTTAAACTTGCAAAAATGGGATGGTTATAGCTCCTGCATGGTGAAATT
TGAATGAAGTTATATTATTCCGCGTATAGTTGATAAAAATTACACCTTAG
GTTGAAGGAATTGCGGTTCACGAAATGTTTCATATAATGGGGTATGCTCA
TGAGCAGAACCGACCTGACCGAGATGAATTTGTTAAAATACACTGGACAA
GAATTATACGACGATACGTTCATAATTTTTTCAGATCTATTAACCCTGGA
GAAGCAGATGTGCCACCCATATGCAATTCATGGAGTAATGCTACAACATT
TGACAATTGCTATTCAGGTTATGAAACTGAGACTTTTGGATACCGCTATG
ACTATGGATCGATTATGCATTATGGTCTATGGGAGTAAGTACATTTGATA
TAATATAAAGAATGATTAAAACTGCAATTGCACTTATGAAACAGCTTTAG
GAAGGCAAAGGACAAAGTCATGGATACAACTAAAAGAGTATCTCCAGGAG
TCAAAATTGGTCAGAGAGTGAAAATGACAGATCTTGATGCAGGAAAAGTT
AATGCCAAATATAAATGTCAACCAGCATCAACNATTATTTCCGATTTTGA
CAACAACGACTTCAAAAAGTACCTCAAAAAATAAAAAACCTGGTAATAGT
ATATTTCAAACAACGATCTACCTCAAGTTGTCTAAATACGTATTTTATAT
ATTCTTAGATTGCTCTAAAGAAAGTGTTCTGTGTCCATATTTAAAAATTA
GCTGTGATTCTAAGTATATGCAAGGTAAATGTCCAAAAAAATGTGGTTTG
TGTTCAACAACCCCAAATCCAACTACTACAACCACAAGAGCTATTGAAAG
TATGTTTCATTACTGAATTATTTTTCTGCACTTTTTTATAATGATTTACT
ATCTTTTTTTTTCTAGCCTGTCTCTTTAAGGAAGAATTATGTCGCATAGA
AAAAAATGATTGCTGAATAGCTTTCTGTTCCGACCATTAAATAAATCAAT
CACTAAGTTAGTTTAGTTAACTCTTTTATTAAATCTCTAATAATTTCATA
TTTTTAGATTGCACCACAAAAATGACTTTTTTTAAAAAGAACTTGATWTT
TTCTACGATTAGCTTACATTTTCAACAGCCATATTTTTCTATATTATATT
TCATGAATTTATATTTATGTATATATAAACACGTTCTTTAATATTACTTC
ATTAATTTTTATATGTATTAAAAACTGCGATGAATAACTCAAACTTTAAT
AAGAAGAGTATCCGTTTCTTGGAGTTGTCAATAAAATTTATTCAAATTAA
ATACGTGAAAAGGAGTAGGGAACAGTTGCAAGACGGAATGATTGCAACAG
TATTTTTTTTATTTTATTTACATAAACAAGGGTAAATCTCTACAATTTAC
ATCACAATTGAATAATTAGGAAAAATGTGATAATTTATGTCAAGTTTTCT
TTGATGTATTTGGTTAACACTGTTCATGAAGATCAAAAGAAGCCATGTGA
GAATCATGGGTTTGTAATATTGCTGTTGATTTTTCATTAGTTTTCCTTCA
ACATATATCAATTGAATAACTGATTACTTTTCTATTAGTTTATATAGTTT
CATTAAAATTCCAAATTTTCTCACTGAGAAGAAATTTGATCTAATATAAC
ACTCAGTACAAAGGGGACAGATGGACGCATGGTTTATTCTTTTTTTCTCT
TAAACTTTAAATCAACCATGATTTTTATCTAGAACTGGATCCCAAAAATT
TCTTAAGAACGTATTTCTCTGATTTATAATATTAATATATCAAAATCTAC
AATAATACATTCACATGTAATAATTCAACATTATGGAAGGCCTTGCTATT
TATTTCAAAACAATAGCTCAAAGGCATGATTTGAGGAAAAACTGGCAATG
TTAAAAATTACGGGGGAAAAATAAACAAACAAAAAAAGACAAAGTGTGAA
AAAAAAGGTGAAAATATTTTAAGCTGATAAATTGTACATGTTTTTAAAAG
TTTGGCATTTGTAAAAATGTGCTATAATTATATTCAAATCGCTCTCGGGT
ACATGAATTTTGCCATTTTTTAAAAATTTTCCATATTTTTTTCCCCTGAC
ATTTTTTTTCGTGTTACTCTTTAATTTGCTCTTTTTTTCTTACACTGCAA
GCATATGTTAGCATGTTGTCTTCAAATCATACTAGCTTGTAATAATTGGN
NNNNNNNNNNNNNNGTATTGCAAGGGAAGTTCTTGCTTTATAATTAATTT
TTATATTWAGAAAGTACTATTTTACTGACTGTTTCAGATAAATTGTTCTC
AGATAATAATAATAACTATTAATATATATTTTTTATTTTATTAACAGTTC
CTTTTATATTTACAAAGCAATTACATAAATAAATATATATATAAATAAAC
ATTATAGGTTAAACTTATTGCTTATAAATTCTATTTTATTTTTTTACCTC
ATACATATACAATGTTCAATATTTCATAGGTATATTGGAGTAAGGGCTTT
GTTTTTACATTTGTGAGATGAGTTAAGATAAAGATACTTAAGAATTTTAG
CTACAGGGAACTTCATGGACAAGGACTCATAAGTCCTTGTACACTTTTTA
TGAAATAACAAAAAAAACTGATTTCCCTTTAGCTAAAAGAAAATTAGTAA
GACCGGGTCTAATGATCAAAATCGGTCCGCACAGAGAGCGTCATTAGGAG
TGAAAGATACACGCCAATCCTCCTTACAACATACAGCAAATGGCCGGGAA
CCTCAYCAGTTTCATCAATAATAAAAGAACATAAAAATTTTATTCGTTCT
GAATTAAATACCAAAGANNNAGGCGCATTTTTAAAGACTTAAACTATGAT
TCTGCGTCCCAAATTTTGACATTTTTCTCCTTCAACTTATTTTTTAATTC
CTTTATTTCTGCTTCATAGACTCCAAGTTGGATTTGTGTGATGGTACTTA
TTTCCTTTAGATGTTTTACTTCAGGATAAATATCTGCAATACATACAATT
ATTATTTTCTAATGATACAGTAACTTATGCAAAAAAAATATAAATATATA
TATATCACTYTAAGAAGTTTCATCTTCTATTGTTYATGAAATTAGATTKA
TGTCCACTAAGTCTATTTCTCTATTTTCGGAAGTAAGAGGTTCCAAATNA
AGGAGTAAAGTACGTATGATCCTGAAATTGTGGAGATCTTTTTTGCCTGA
AATTCGAAATAAAAAGTTGCTTGAGATTTAATTAATTATTAAATTGTCTT
AGCATCAGCATTGTTCTCCCGAATGAAAATGGGATTGTTGGTATTCTTGG
TGAGCTTTTAGGTTTTATATATTTAAACAATGTTGGAATGGCTTGAGAGM
TGTAATTCCTTGTTTCTTCAAAATGTTTAGAGCACAATCGAAAAWAACAT
TATGGTTTCCAAAGATTCCAAATACTAATTCCTTCATTGAACTATTGGTT
CAAACTATCAAACTATAGCTAAACGATAGGGCAAAAATTTGTGAAAATAT
GTGAAAAATGAATGCATAAGGTGTCCTAAAAGCATTAAGAATGACATAAT
GTAGGCAGAAAAATATAAAGGAGTACCTGGAGCAATAATTTTGGACGCGT
ACTGGATACTCATGACATGTTCGATGAAAAGAGAAAAACACCCAAAAAAA
ATTGTGGAAAGTTCTAATATACGATAATCATTATGCTCATTTTCCTTGGG
CGGAAACAATGAAGAACATAATTAGAAATATAATTTACTTCATTATCGCT
TAGAGTAATATTGAAAAGTTGAGAGGAAAAAAAGAATAAGGGCCATCGAG
GAATTAATGGCATCAAATAATATAACTGATCCAGCCCTAGCACTACTCAA
ATTATAAATAAACTCTAGGCATTAAAAGGAGTTAAGAAATAAGGGCACCT
AACCAATTTATGAGGAGCAAAATATTGGAGGGAAGTGAAAAAATAAGACG
CATTTTCTACATCTTTGAAAAGAACCGGAATTGAGGGAGGCCAGCTGATG
AATTTATGTTATGGAATCTTTGACAAGGAAATAACTTCTAGCCAAATGCT
TACAAGATATAAAAGTGCCACATGNATTATTTCCAAATTCAACAAAAAGT
TTCTCAACAAGTCGAACCCCTGGTAGTAGTTGTTTATGTGAAAAAACGAT
ATAACACAATTCGTCTAAATACGTATTTTTACTGTATTTTTAGATTGTTT
AGATATTTCTACACTGTGTCAACATTTAAAAGATAAGTGCAGTTTTTCTT
TTATGCATAAATCATGTCGAAGAACATGTGGGATGTGTCCCCCCGACCAA
GTAGCAACAGCAACCACGAAACCAACCAAAGCCAACACTACAGCAAAGCC
TATTAAAAGTAGACTTTTTTTTACTTAACTCTCCCATTTGATATTTATTC
ACACATTTTCTGTTTATTTTATAATAGTTTGTTTCAAGGAAAATTTATGT
ACCGTAGCAAAACGGCATTGTACATAACTTAGGATTGAGTTACGGTAGAT
TATATGAGTCAATAACTGGTTTGTTTGAAATTTATTTTAATTGAAAAATT
AACTTTATAATAATTTCATATTCTTAGGTTACACCGTAAAATGA

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