EMLSAT00000011001, EMLSAT00000011001-706848 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011001
Unique NameEMLSAT00000011001-706848
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s73supercontigLSalAtl2s73:766600..768502 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011001 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011001EMLSAG00000011001-693767Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049186EMLSAE00000049186-758114Lepeophtheirus salmonisexon
EMLSAE00000049187EMLSAE00000049187-758115Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779626auto779626Lepeophtheirus salmonispolypeptide
EMLSAP00000011001EMLSAP00000011001Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011001

>EMLSAP00000011001 ID=EMLSAP00000011001|Name=EMLSAP00000011001|organism=Lepeophtheirus salmonis|type=polypeptide|length=567bp
MPPLWTPRRSEQASSGPPPPKEAIELFISFYEGTNFQDTLESFVKLCEIL
NFPFGGPFSVFYPKLKRALKDHLPYKYKEIWKILDKKAAQKPYGANSVCE
NKKTLVVGCGPCGSQTVILERRGNFSRNNVLKIWKFLIDDLKMLGAKKLF
GSFCSGAINHIGIRTLQLLLSKIILMMGVKVLVCTFDDLIEPTDSSRWKA
KVTPSGEFMDNFEFDFLIIASGKKXAIEGFNRRSLDAKLSIAITANFQNK
GTSEEKATRQISGISRQYDQQFFKAMVDEFGISLENLVYYRGETHYFVMT
ALKKSLLDKGVLIQDEDDRKLLLAPTNVNKEALYACAKDAALFATKSFSK
VLPHTDFQLNSRGQPDVAIFDFTNLYSAKNSCKIRVSNGCTLLMSIVGDS
LLEPFWPEGTGCARGFLSCMDAAWMFRQWCVARKNPMDILAERENIYKML
TQTSDGGQGGNLKPNYKSYTTDPKTRYRMVPKTNDDMKQKILTLYETDNS
EEYQYLSDMFLKGKYFEEDKHKGFLKRVRHALKEKKTLSFTTTSRVISKF
KKKKRNPPAAEAATELS
back to top

mRNA from alignment at LSalAtl2s73:766600..768502+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011001-706848 ID=EMLSAT00000011001-706848|Name=EMLSAT00000011001|organism=Lepeophtheirus salmonis|type=mRNA|length=1903bp|location=Sequence derived from alignment at LSalAtl2s73:766600..768502+ (Lepeophtheirus salmonis)
ATGCCTCCTCTCTGGACTCCTCGACGCTCAGAGCAAGCTTCATCAGGGCC ACCTCCACCGAAAGAAGCAATCGAATTATTTATCTCATTTTATGAAGGAA CCAATTTCCAGGATACCTTAGAGTCATTTGTGAAGCTATGTGAAATCCTT AATTTTCCCTTTGGGGGACCTTTCTCAGTGTTTTACCCAAAGTTGAAGCG GGCTTTAAAGGATCATTTGCCTTATAAATACAAAGAAATTTGGAAGATTT TGGATAAAAAAGCAGCACAAAAACCGTACGGTGCGAATAGTGTTTGTGAA AATAAAAAAACTCTTGTTGTGGGATGTGGACCCTGTGGTCTTCGAACTGC AGNTTGAGACTCAATTATTAGGTAAGAAGAACTTTAAAATGCTTTAAATT CAAGTTACACATATATTTTTCGAGTCATTATTATTTTTTTTTTACATGCT CTACTTTCTAAACCCTCATTTCGATGACCTCAATTTTACAATTGAGTAAT TTACTAATATAAACACTTTTATTATTATATTTCTAGGATCACAAACTGTA ATTCTGGAGCGACGTGGGAACTTCTCCCGTAATAATGTGTTAAAAATATG GAAATTTTTAATAGATGATTTAAAAATGCTTGGAGCCAAAAAACTTTTTG GTTCTTTTTGCTCGGGAGCCATTAATCACATTGGCATAAGAACTCTACAA TTGCTCCTTTCAAAAATCATATTAATGATGGGTGTCAAAGTCCTAGTTTG TACATTTGATGACCTTATTGAGCCTACAGATTCTTCTCGTTGGAAAGCCA AAGTCACACCAAGTGGTGAATTTATGGATAACTTTGAGTTTGACTTTTTG ATCATTGCGAGCGGAAAGAAGMTAGCCATTGAGGGTTTTAATCGGAGGTC CCTAGATGCCAAGTTGTCCATTGCTATTACTGCCAATTTTCAAAATAAAG GAACCTCGGAGGAAAAAGCAACACGCCAAATCTCTGGAATCAGCAGGCAG TACGATCAACAATTTTTCAAAGCAATGGTTGATGAGTTTGGGATATCATT AGAAAATCTGGTTTATTATCGAGGAGAAACACATTATTTTGTTATGACTG CTCTCAAAAAATCATTATTGGATAAGGGAGTTCTCATTCAGGATGAAGAT GATCGAAAATTGTTGCTTGCACCAACCAATGTGAATAAAGAAGCCCTGTA CGCTTGTGCAAAAGATGCTGCTCTTTTTGCCACAAAATCCTTTTCAAAAG TCTTGCCCCATACTGACTTTCAACTCAATAGTAGAGGTCAGCCAGACGTT GCAATCTTTGATTTTACAAATCTCTACTCAGCTAAAAATTCCTGCAAAAT ACGTGTATCCAATGGATGCACCTTACTTATGTCCATTGTTGGAGATTCTC TCCTAGAGCCTTTTTGGCCTGAGGGCACAGGCTGTGCTCGAGGTTTCTTA TCATGTATGGATGCAGCATGGATGTTTCGTCAATGGTGTGTCGCTAGGAA GAATCCTATGGATATTTTGGCTGAAAGAGAAAATATTTACAAGATGTTAA CCCAGACGTCAGATGGAGGACAGGGAGGMAATCTCAAACCAAACTATAAG TCCTACACCACTGATCCCAAAACACGTTACAGAATGGTCCCAAAAACGAA TGATGATATGAAACAAAAGATTCTCACCTTGTATGAGACAGACAACTCAG AGGAGTATCAGTATCTGAGCGATATGTTTTTGAAAGGTAAATACTTTGAG GAGGATAAACATAAAGGATTCCTTAAGAGAGTACGCCATGCTCTCAAAGA AAAGAAGACCCTCAGTTTCACAACTACATCTAGAGTTATTAGCAAGTTCA AAAAGAAAAAGAGAAATCCACCCGCCGCTGAGGCCGCAACGGAATTGTCT TAG
back to top
Add to Basket