EMLSAT00000011083, EMLSAT00000011083-706930 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011083
Unique NameEMLSAT00000011083-706930
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s750supercontigLSalAtl2s750:9735..14619 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011083 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011083EMLSAG00000011083-693849Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049533EMLSAE00000049533-758461Lepeophtheirus salmonisexon
EMLSAE00000049534EMLSAE00000049534-758462Lepeophtheirus salmonisexon
EMLSAE00000049535EMLSAE00000049535-758463Lepeophtheirus salmonisexon
EMLSAE00000049536EMLSAE00000049536-758464Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768950auto768950Lepeophtheirus salmonispolypeptide
EMLSAP00000011083EMLSAP00000011083Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011083

>EMLSAP00000011083 ID=EMLSAP00000011083|Name=EMLSAP00000011083|organism=Lepeophtheirus salmonis|type=polypeptide|length=219bp
MNGRSLCENNESPCYSSNNEYAHGMINNENGWTNYHYESRGQDYGEHYHG
PEDYRNGGVDYVLNENEPMLQQPNGELIGYNSYDNSNYGESHCTSVMLNG
HSNGYHGPISSDTHYSKPEVYISSLGNKKSTSIRESRGSSKTPEERRLSR
EEKRRRRRASVKYRTAHASRERLRVEAFNGAFSTLRHLLPTLPPDKKLSK
IEILRLAICYITYLDNVLG
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mRNA from alignment at LSalAtl2s750:9735..14619+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011083-706930 ID=EMLSAT00000011083-706930|Name=EMLSAT00000011083|organism=Lepeophtheirus salmonis|type=mRNA|length=4885bp|location=Sequence derived from alignment at LSalAtl2s750:9735..14619+ (Lepeophtheirus salmonis)
GTCTTATTCAACACGTGTTAGCAGTGTTTACTTTTGAGGGTTCTTTATAC
TTTTTGTGATGAAGCTTGAGGATTTTCCCTATTGTTTCTAATATATGAAA
ATTAATATATCTACTTACACACAAAATTACTAGAAGTACAAGTAAATTTA
TAAAATAAGTATTCCCTCAAAATTTGAAATATTCAAGCATTAGTGATTCA
TTCAAAAATAACGTTTTGAACCCTATTGATCAAATTGAAAATATTGTTTT
TCATTTGTTTTTTAGTTAGCATTAAATATACACTCACTTTGAATTAATTA
TGTCATTAAAGGAATTACAAATTTTGGTGAAAATTCAATGACTTTTTTTC
TACATTATATTGCATTGCAATACCGGGTGGTACATTGAAATCTGAACACT
TACTAATTCAATAATTATTGAAGTTGAGCGATTGAAATTAATTCATATTT
GGATATATCAAAACATAAACAATTAGTTATGAGAAAAAATAGACCTTAGC
TCTCTAACTTACGTACAAACCGAGAAAAGGATTTGTACATGACTGACGAA
TTTCCGTTCGCGTACTATAAGCAGTATTGTATACATTGTCTGCATAACCA
ACGTCTACGCTGTCAGAAAGTCCAAAGCGTTGCAAAAGAAGAAGAACTCT
GTCAAAAAGGCCAAACTGAATCTGGAGGAGTAAAAGAAAACATACCAGGC
TAATCCCCTCAACTCAATCATGGCCCATGCTAGAGATCTCGGATTTTCAT
ACCAGACTGTCCAGAAAGCTATCAAAAAGTAGGTGYAGAGGCCACTTATG
ACACCAGCAACGAAATAAATCTTTCTTCTCCGTTGAAAAACTCTTGGCGA
ATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGTCAGCACTGGGATACCATGTCAGAGTACTACATCTGTGCCCTGCAT
GGGAACCATAATTGCCGCTAAGGGCGGCTATATAAATGATTATGTGAGCT
CATACACACATCTATTTATAGTATTAATTTTGTTGACATTCTATTGTTGT
TTAATAAATTGAATCTTTTGAAATTTAAAATTCAAAGTGTTCATATTTTA
ATGGACCACTCAGTATATCTAATAGGTCTTATAAACACATTTTCACTCAT
TTCCAAATTTTAAGGGTTATATTTCAACCAATGAAAATATTTTATAGCGC
AATACTCAATAATGAACGGACGAAGTTTGTGTGAAAATAATGAGAGCCCT
TGCTACTCAAGCAACAACGAATATGCACATGGTATGATCAACAATGAAAA
CGGATGGACCAACTATCATTACGAATCCAGGGGGCAGGACTATGGTGAGC
ATTATCATGGGCCTGAGGACTATAGAAATGGAGGCGTTGATTATGTGTAA
TTATGAACATGGATTATATAATTGATAAAAAATTAATATAATTATTTAGC
CTCAATGAAAATGAGCCGATGCTTCAACAGCCAAATGGGGAACTTATTGG
TTATAATTCATACGATAATAGCAATTATGGTGAAAGCCATTGCACTTCTG
TCATGTTGAACGGTCATTCCAATGGATATCATGGTCCAATTTCCTCTGAT
ACACACTATTCAAAACCAGAAGTTTATATAAGCTCATTAGGGAATAAGAA
GTGAGTTCTTTATTTACATAATTGCCTGTCTTTTGTATGCATCGATTAAT
CAAAAAAAAATAAAATTGCCTTTTGCAATTTTTTATAACTTGTCATACTT
TAGCTTCATTAAATGATGTATCGTCCAACTCAATTGTTTACCGTCAAATC
TCTTACGGAATTGCAAAATGATACGTGATTGACTTAAGGGGGGTTCATAA
CTTGACGCATCGTACTTTTTTTAAAAGATTTTTCCTTACTTTTTGTAAAG
CTCCAAGAAATGTACATATATTTCGAGATTTAGGTAAAATATACCCATTG
ATACATGAGAAATATTATTTGTAAAATAATTGAATGTTTTAAAAGCAAAC
AGGTATTAATATATTATAAACTTTTAGGGGTTTTAGGGCTCTTTATTACC
TTAAGAGTGAGTATTGGTCAATTCTTAAAAAGAAATTGCTACGCCGCTCT
TTTCTTAAACATCCTTCTAAAAAATTGGGGTTAATTTATCATTTATCGTT
TCCCTAGAATCAAGTAATAATGTCTTATCTGGCAAATCTTATATGTAGGA
GAAAACCGGAGACAAGTAACAATTTTTGTTAAACGTTGAATTACTTCAAG
CTGAATTGACAAATTTTAACACAACATTCATATGTCAGCTATTATTTGAA
TCTATTTAGATGGTTATACCACTCAATAGTTTTTCTCCAAAATTCATTCG
AAGGCAACTCGTCATAGATTGCAACATTCCCGGCTGGTTGCCATAACAGA
GTTTTTAAATCTATAACAACAKCCACCGTTAGAATTCCATTTTCAAATTT
AGGAAATGAATTTTCCGTTTTTTTAATATAGTTTTACAAATTTTTACTTG
GGGGAGGGGGAACTATTTAAATAAAAAAGACGAAATAGGAAATATTTCAC
TTGAAATTTTTGAAGTTCTTCTTTTTACAAATGCAAATTAAAAGCACAAT
ATACGTTTGTCTTAACAATACATTTATTGATAAGAGCATGTATGAAAAAA
CTTATCTCTCCTATGGCCAAAAATGTTTCTTGATAATTCGATGTATTACT
TCGACATAACCCCAAACTAATGAAAGCTTTTTTGACTGTTTTTTTTTTTT
ACTTTTTTGTTTAAGTCAATTTATATTTTTTATAAGGCAACTCCAAAAAT
ATTACAACTGTCCTCGTTGCCTGAAACAATTATTCATTAAGTTAATTGAA
ATCCATTTTAACTAAGTTTGAGTCTACAACGCATAGTTGTGGCAAAAATC
AACAGTTTTTTTACTTTTTTTAAGGTTTATCAAAGGTAAATTTTGGCAGC
TATTTTATGCTTAACATTGTCAAACCTTTAACCTTTTTCCACGAATTTTT
CTTTTTCATACATATTATTTTCTTCCAATTCAGCAAAAATGGGGTTCAAG
GGATTTAGTAGGACTTTTAAAATACATTTAAAATTTTATCAAAATAGGTT
CCGCTCTAACCTGTGTATTTTTTCTCAACTGGTCATATTTCAACAACAAT
TGCCTTTTGTTTAGAATATTGACCTGTGGAAAAACTTAAATTATAGTTGA
TCTGAACTATAATATATTGAAGTTTAAGAGTTATTTAGGGTTGACTAAAA
TACTATTCGTATCAAATAAATGAGTGCTCAGAGCAGTGATACGACGATTC
AAAAGTACTTCTTAACATTGTACAAAATAACCTTATTAGTCTTGTTTTTA
TATTAAAACTCAGTTCATAAATTAGTTTGTTACTTCACGTGTTAAAATTG
ACGCGTCAATAATAACTTGAATTTTTTTCTTGTAAATTTCATTTGCAATT
TTAAACGTATTTCTTTATATTTATCATACTTAAATATAAGCTCGAACCTG
AAAAAAGGGTAAAATTACTAGAAATTTTATATAAAAAAATTATCAAGACT
AGATTTACTACGAAAAATAACGAATCGCAGATTAGTAGTGATCAGCTCGT
CAAGTACTAAAAATATTGAATATCGAATTTATTTATTTTTGAAAAATTCA
AATTTTGTGGACTTGTTTAACTTGTTCAAAAGACTCATTCAAAAGTGTCA
CACAACGAAGGAGATGTGTTTCTTTGATTGCTGGTGTAAAAAAAAAAAAC
CGTACTACCCTTACAAGGCTCTTTCCTCCCATTTTTTGATATCTTTATGG
ACAGTCTGTAGTGAAATACATATGTATCTTGGATATGCCTTAATTCACTT
GAGATGATTGCCTGGACTGTTTTCTTTAACTCCTTCGGGTCCAGTTTGGC
CTTTTTGAAAAACCCCTTCTTTCTCTTGGACGTTTCAGATACTGACGGCG
TAGACGGTGGTGTAGGAGATGTCCAACTGCTTATAGCGCACGAATGGAAA
TTCGTCAATCACGTTAAATTGTAATTTTATCGACTTTAGACATCTCAGAT
TCGTTTTGATTTGTAACTTATTGTTTATGCATTAGTATATCGAAATATGA
ATTAATTTCTATCAATTAACCTCCATTAATTATTGAATTAGTAAGTGTTT
AGATTTCAATAGATCACCGCATATATTTATTGTCTTTCTGTCAACATATA
AATTAATATGAACTCAACTGTATGTTTACTCCAAATATAGATCGACATCT
ATACGCGAAAGCCGAGGAAGTAGCAAGACTCCCGAGGAACGTCGCTTAAG
TAGAGAAGAAAAAAGACGAAGACGTCGAGCCTCGGTCAAGTATCGTACAG
CTCACGCCTCACGCGAGCGGCTGCGTGTAGAGGCATTTAATGGAGCATTT
TCAACTCTCCGACATCTTCTTCCCACATTGCCTCCAGATAAAAAGTTATC
AAAGATAGAAATCCTTCGACTGGCTATTTGTTATATTACTTATTTAGATA
ATGTGCTAGGGTAGTGCTTTTTAAATTGTTTTGATGTTTTTCTTTCAAGA
AATAAAGAATTTTAGTCATTTATCTATCATTGTTT
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